Conservation of cofitness between ECD_03092 and ECD_01082 in Escherichia coli BL21

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03092 divisome ATPase 1.0 ECD_01082 23S rRNA pseudouridine(955,2504,2580) synthase 0.64 17
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00472 Cell division protein ZapE 1.00 OHPLBJKB_02580 Ribosomal large subunit pseudouridine synthase C low > 73
Escherichia coli ECOR27 0.99 NOLOHH_09615 zapE cell division protein ZapE 1.00 NOLOHH_21145 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Escherichia coli ECRC62 0.99 BNILDI_01920 zapE cell division protein ZapE 1.00 BNILDI_19305 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.61 19
Escherichia coli ECOR38 0.99 HEPCGN_16685 zapE cell division protein ZapE 1.00 HEPCGN_23865 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Escherichia coli ECRC100 0.98 OKFHMN_17815 zapE cell division protein ZapE 1.00 OKFHMN_03615 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 80
Escherichia coli ECRC101 0.98 MCAODC_08335 zapE cell division protein ZapE 1.00 MCAODC_22975 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 87
Escherichia coli ECRC102 0.98 NIAGMN_15575 zapE cell division protein ZapE 1.00 NIAGMN_24215 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli BW25113 0.98 b3232 yhcM conserved protein with nucleoside triphosphate hydrolase domain (NCBI) 1.00 b1086 rluC 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECRC99 0.98 KEDOAH_10335 zapE cell division protein ZapE 1.00 KEDOAH_24140 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC — —
Escherichia coli ECRC98 0.98 JDDGAC_21440 zapE cell division protein ZapE 1.00 JDDGAC_07275 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Escherichia coli Nissle 1917 0.98 ECOLIN_RS18535 cell division protein ZapE 1.00 ECOLIN_RS06280 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 55
Escherichia fergusonii Becca 0.97 EFB2_00598 Cell division protein ZapE 1.00 EFB2_02889 Ribosomal large subunit pseudouridine synthase C low > 86
Klebsiella michiganensis M5al 0.87 BWI76_RS25355 cell division protein ZapE 0.93 BWI76_RS11050 23S rRNA pseudouridine(955/2504/2580) synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2972 ATPase, AFG1 family 0.98 GFF3366 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_3281 Predicted ATPase 0.92 EX28DRAFT_1844 pseudouridine synthase, RluA family low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_04136 Cell division protein ZapE 0.89 MPMX20_01766 Ribosomal large subunit pseudouridine synthase C low > 85
Pantoea sp. MT58 0.71 IAI47_17250 cell division protein ZapE 0.85 IAI47_12105 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 76
Erwinia tracheiphila SCR3 0.69 LU632_RS21345 cell division protein ZapE 0.85 LU632_RS14855 rluC 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Serratia liquefaciens MT49 0.68 IAI46_22380 cell division protein ZapE 0.80 IAI46_09755 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 86
Rahnella sp. WP5 0.66 EX31_RS12485 cell division protein ZapE 0.82 EX31_RS24400 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 89
Dickeya dadantii 3937 0.64 DDA3937_RS01615 cell division protein ZapE 0.80 DDA3937_RS13155 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 74
Pectobacterium carotovorum WPP14 0.64 HER17_RS19975 cell division protein ZapE 0.81 HER17_RS08615 23S rRNA pseudouridine(955/2504/2580) synthase RluC 0.68 24
Dickeya dianthicola ME23 0.64 DZA65_RS01595 cell division protein ZapE 0.80 DZA65_RS13690 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 75
Dickeya dianthicola 67-19 0.64 HGI48_RS01530 AFG1 family ATPase 0.80 HGI48_RS13220 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 71
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_03030 cell division protein ZapE 0.63 CSW01_10130 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 62
Marinobacter adhaerens HP15 0.49 HP15_2424 AFG1-family ATPase 0.51 HP15_2221 pseudouridine synthase, RluA family low > 73
Kangiella aquimarina DSM 16071 0.48 B158DRAFT_2095 Predicted ATPase 0.55 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) low > 40
Pseudomonas putida KT2440 0.47 PP_1312 putative enzyme with nucleoside triphosphate hydrolase domain 0.55 PP_1906 ribosomal large subunit pseudouridine synthase C — —
Pseudomonas fluorescens GW456-L13 0.46 PfGW456L13_1628 ATPase, AFG1 family 0.51 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 87
Shewanella amazonensis SB2B 0.46 Sama_3072 hypothetical protein (RefSeq) 0.63 Sama_1988 pseudouridylate synthase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N1B4 0.46 Pf1N1B4_2969 ATPase, AFG1 family 0.52 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas simiae WCS417 0.46 PS417_04125 ATPase 0.54 PS417_21480 23S rRNA pseudouridylate synthase — —
Shewanella sp. ANA-3 0.46 Shewana3_0691 AFG1 family ATPase (RefSeq) 0.65 Shewana3_2566 ribosomal large subunit pseudouridine synthase C (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_4122 AFG1-like ATPase 0.55 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Alteromonas macleodii MIT1002 0.46 MIT1002_00844 AFG1-like ATPase 0.63 MIT1002_01725 Ribosomal large subunit pseudouridine synthase C low > 70
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_4122 AFG1-like ATPase 0.55 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Pseudomonas fluorescens FW300-N2E3 0.46 AO353_15185 ATPase 0.53 AO353_01405 23S rRNA pseudouridylate synthase low > 101
Pseudomonas fluorescens SBW25 0.46 PFLU_RS04165 cell division protein ZapE 0.54 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS04165 cell division protein ZapE 0.54 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Pseudomonas fluorescens FW300-N2E2 0.46 Pf6N2E2_5331 ATPase, AFG1 family 0.55 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 103
Pseudomonas sp. S08-1 0.46 OH686_08425 Cell division protein ZapE 0.54 OH686_22095 LSU rRNA pseudouridine(955/2504/2580) synthase — —
Shewanella loihica PV-4 0.46 Shew_3295 AFG1 family ATPase (RefSeq) 0.66 Shew_1594 RluA family pseudouridine synthase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N2C3 0.45 AO356_17035 ATPase 0.55 AO356_20125 23S rRNA pseudouridylate synthase low > 104
Acinetobacter radioresistens SK82 0.45 MPMX26_01246 Cell division protein ZapE 0.43 MPMX26_00317 Ribosomal large subunit pseudouridine synthase C low > 36
Pseudomonas stutzeri RCH2 0.45 Psest_0722 Predicted ATPase 0.56 Psest_1680 pseudouridine synthase, RluA family — —
Pseudomonas sp. RS175 0.45 PFR28_03612 Cell division protein ZapE 0.55 PFR28_03018 Ribosomal large subunit pseudouridine synthase C low > 88
Xanthomonas campestris pv. campestris strain 8004 0.39 Xcc-8004.337.1 ATPase, AFG1 family 0.42 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 74
Ralstonia solanacearum GMI1000 0.39 RS_RS06375 cell division protein ZapE 0.46 RS_RS05155 RluA family pseudouridine synthase low > 80
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS11125 cell division protein ZapE 0.46 ABZR87_RS10090 RluA family pseudouridine synthase low > 80
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS16285 cell division protein ZapE 0.42 ABZR86_RS02725 RluA family pseudouridine synthase low > 74
Ralstonia solanacearum UW163 0.38 UW163_RS13055 cell division protein ZapE 0.47 UW163_RS11840 RluA family pseudouridine synthase — —
Ralstonia solanacearum IBSBF1503 0.38 RALBFv3_RS15595 cell division protein ZapE 0.47 RALBFv3_RS14375 RluA family pseudouridine synthase — —
Rhodanobacter denitrificans MT42 0.38 LRK55_RS09480 cell division protein ZapE 0.45 LRK55_RS17750 RluA family pseudouridine synthase low > 63
Ralstonia solanacearum PSI07 0.38 RPSI07_RS17760 cell division protein ZapE 0.46 RPSI07_RS19085 RluA family pseudouridine synthase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.38 H281DRAFT_05116 cell division protein ZapE 0.46 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase low > 103
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS09820 cell division protein ZapE 0.45 LRK54_RS17895 RluA family pseudouridine synthase low > 59
Dechlorosoma suillum PS 0.38 Dsui_2221 putative ATPase 0.47 Dsui_2437 pseudouridine synthase, RluA family low > 51
Paraburkholderia graminis OAS925 0.38 ABIE53_002450 cell division protein ZapE 0.46 ABIE53_003058 23S rRNA pseudouridine955/2504/2580 synthase low > 113
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS08125 ATPase 0.46 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C 0.53 101
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS23045 cell division protein ZapE 0.49 QEN71_RS04500 RluA family pseudouridine synthase 0.55 53
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_16080 zapE cell division protein ZapE 0.45 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase low > 52
Cupriavidus basilensis FW507-4G11 0.37 RR42_RS12925 ATPase 0.46 RR42_RS14155 pseudouridine synthase 0.47 57
Herbaspirillum seropedicae SmR1 0.36 HSERO_RS14870 ATPase 0.47 HSERO_RS09415 ribosomal large subunit pseudouridine synthase C — —
Acidovorax sp. GW101-3H11 0.36 Ac3H11_2464 ATPase component BioM of energizing module of biotin ECF transporter 0.43 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 79
Variovorax sp. OAS795 0.36 ABID97_RS14160 cell division protein ZapE 0.43 ABID97_RS08250 RluA family pseudouridine synthase low > 91
Castellaniella sp019104865 MT123 0.35 ABCV34_RS01735 cell division protein ZapE 0.42 ABCV34_RS08415 RluA family pseudouridine synthase low > 48
Variovorax sp. SCN45 0.35 GFF982 Cell division protein ZapE 0.44 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.35 GFF4874 ATPase component BioM of energizing module of biotin ECF transporter 0.43 GFF121 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) 0.59 64
Lysobacter sp. OAE881 0.34 ABIE51_RS01095 cell division protein ZapE 0.43 ABIE51_RS11800 RluA family pseudouridine synthase low > 62
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_03646 ATPase 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Caulobacter crescentus NA1000 0.34 CCNA_03646 ATPase 0.24 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Azospirillum sp. SherDot2 0.33 MPMX19_00614 Cell division protein ZapE 0.24 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C low > 112
Azospirillum brasilense Sp245 0.33 AZOBR_RS14095 ATPase 0.23 AZOBR_RS06905 pseudouridine synthase 0.41 50
Magnetospirillum magneticum AMB-1 0.32 AMB_RS20020 cell division protein ZapE 0.26 AMB_RS15620 RluA family pseudouridine synthase low > 64
Sinorhizobium meliloti 1021 0.31 SMc02478 hypothetical protein 0.26 SMc01275 ribosomal large subunit pseudouridine synthase C protein low > 103
Rhodospirillum rubrum S1H 0.31 Rru_A1208 AFG1-like ATPase (NCBI) 0.26 Rru_A2659 Pseudouridine synthase, RluD (NCBI) — —
Phaeobacter inhibens DSM 17395 0.30 PGA1_c31670 AFG1-like ATPase 0.25 PGA1_c01950 ribosomal large subunit pseudouridine synthase C — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS12685 cell division protein ZapE 0.25 A4249_RS07865 RluA family pseudouridine synthase — —
Rhizobium sp. OAE497 0.29 ABIE40_RS18005 cell division protein ZapE 0.26 ABIE40_RS09915 RluA family pseudouridine synthase low > 107
Agrobacterium fabrum C58 0.28 Atu2640 hypothetical protein 0.26 Atu1471 ribosomal large subunit pseudouridine synthase C — —
Dinoroseobacter shibae DFL-12 0.28 Dshi_0112 AFG1-family ATPase (RefSeq) 0.23 Dshi_0315 pseudouridine synthase, RluA family (RefSeq) low > 64

Not shown: 4 genomes with orthologs for ECD_03092 only; 0 genomes with orthologs for ECD_01082 only