Conservation of cofitness between ECD_00149 and ECD_00887 in Escherichia coli BL21

78 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00149 ferrichrome outer membrane transporter 1.0 ECD_00887 ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity 0.36 42
Escherichia coli ECRC62 1.00 BNILDI_09005 fhuA ferrichrome porin FhuA 1.00 BNILDI_20435 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli BW25113 1.00 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 1.00 b0882 clpA ATPase and specificity subunit of ClpA-ClpP ATP-dependent serine protease, chaperone activity (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_02665 fhuA ferrichrome porin FhuA 1.00 NOLOHH_22180 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Escherichia coli ECRC100 1.00 OKFHMN_10320 fhuA ferrichrome porin FhuA 1.00 OKFHMN_05785 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Escherichia coli ECRC101 1.00 MCAODC_00835 fhuA ferrichrome porin FhuA 1.00 MCAODC_25000 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli ECRC98 1.00 JDDGAC_13915 fhuA ferrichrome porin FhuA 1.00 JDDGAC_09420 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Escherichia coli ECRC99 1.00 KEDOAH_17835 fhuA ferrichrome porin FhuA 1.00 KEDOAH_22125 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECRC102 1.00 NIAGMN_08170 fhuA ferrichrome porin FhuA 1.00 NIAGMN_03825 clpA ATP-dependent Clp protease ATP-binding subunit ClpA — —
Escherichia coli ECOR38 0.90 HEPCGN_08270 fhuA ferrichrome porin FhuA 1.00 HEPCGN_22900 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Escherichia coli Nissle 1917 0.90 ECOLIN_RS00840 ferrichrome porin FhuA 1.00 ECOLIN_RS04695 ATP-dependent Clp protease ATP-binding subunit ClpA low > 55
Escherichia fergusonii Becca 0.89 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 1.00 EFB2_03179 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.97 EX28DRAFT_2050 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 1.00 OHPLBJKB_02786 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF81 Ferric hydroxamate outer membrane receptor FhuA 0.97 GFF4901 ATP-dependent Clp protease ATP-binding subunit ClpA low > 78
Klebsiella michiganensis M5al 0.62 BWI76_RS05125 ferrichrome porin FhuA 0.97 BWI76_RS09615 ATP-dependent Clp protease ATP-binding subunit ClpA low > 92
Rahnella sp. WP5 0.56 EX31_RS03225 ferrichrome porin FhuA 0.91 EX31_RS18560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 89
Enterobacter sp. TBS_079 0.56 MPMX20_00836 Ferrichrome outer membrane transporter/phage receptor 0.97 MPMX20_01544 ATP-dependent Clp protease ATP-binding subunit ClpA low > 85
Serratia liquefaciens MT49 0.55 IAI46_21185 ferrichrome porin FhuA 0.90 IAI46_08515 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pantoea sp. MT58 0.53 IAI47_15610 ferrichrome porin FhuA 0.92 IAI47_12945 ATP-dependent Clp protease ATP-binding subunit ClpA low > 76
Azospirillum sp. SherDot2 0.33 MPMX19_05479 Ferrichrome outer membrane transporter/phage receptor 0.59 MPMX19_00503 ATP-dependent Clp protease ATP-binding subunit ClpA low > 112
Dickeya dadantii 3937 0.33 DDA3937_RS14700 TonB-dependent siderophore receptor 0.91 DDA3937_RS09560 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS12840 TonB-dependent siderophore receptor 0.63 ABZR87_RS00435 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS12695 TonB-dependent siderophore receptor 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS12695 TonB-dependent siderophore receptor 0.65 PFLU_RS18550 ATP-dependent Clp protease ATP-binding subunit ClpA 0.42 67
Pseudomonas simiae WCS417 0.33 PS417_11955 ligand-gated channel 0.66 PS417_16510 Clp protease ClpX low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_1813 Ferrichrome-iron receptor 0.65 Pf1N1B4_4055 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Pseudomonas sp. RS175 0.32 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.65 PFR28_02613 ATP-dependent Clp protease ATP-binding subunit ClpA low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3994 Ferrichrome-iron receptor 0.65 Pf6N2E2_292 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_10630 ferrioxamine B receptor 0.65 AO356_22150 ATP-dependent Clp protease ATP-binding subunit ClpA low > 104
Dickeya dianthicola ME23 0.32 DZA65_RS15585 TonB-dependent siderophore receptor 0.91 DZA65_RS09885 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Dickeya dianthicola 67-19 0.32 HGI48_RS14640 TonB-dependent siderophore receptor 0.90 HGI48_RS09575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 71
Paraburkholderia sabiae LMG 24235 0.31 QEN71_RS30735 TonB-dependent siderophore receptor 0.62 QEN71_RS03005 ATP-dependent Clp protease ATP-binding subunit ClpA low > 153
Azospirillum brasilense Sp245 0.31 AZOBR_RS26605 TonB-denpendent receptor 0.59 AZOBR_RS05175 ATP-dependent Clp protease ATP-binding protein low > 97
Pseudomonas putida KT2440 0.31 PP_0160 putative ferrioxamine receptor 0.65 PP_4008 ATP-dependent serine protease low > 96
Pseudomonas stutzeri RCH2 0.31 Psest_4337 TonB-dependent siderophore receptor 0.64 Psest_2027 ATP-dependent Clp protease ATP-binding subunit clpA low > 67
Lysobacter sp. OAE881 0.31 ABIE51_RS00595 TonB-dependent siderophore receptor 0.64 ABIE51_RS11490 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Pectobacterium carotovorum WPP14 0.30 HER17_RS02320 TonB-dependent siderophore receptor 0.91 HER17_RS12400 ATP-dependent Clp protease ATP-binding subunit ClpA low > 75
Agrobacterium fabrum C58 0.30 Atu5311 TonB-dependent receptor 0.57 Atu1364 ATP-dependent Clp protease, ATP-binding subunit — —
Rhodopseudomonas palustris CGA009 0.30 TX73_017655 TonB-dependent siderophore receptor 0.58 TX73_016270 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Variovorax sp. OAS795 0.30 ABID97_RS21465 TonB-dependent siderophore receptor 0.61 ABID97_RS16910 ATP-dependent Clp protease ATP-binding subunit ClpA low > 91
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS02745 TonB-dependent siderophore receptor 0.63 LRK54_RS00420 ATP-dependent Clp protease ATP-binding subunit ClpA low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS02500 TonB-dependent siderophore receptor 0.63 LRK55_RS00160 ATP-dependent Clp protease ATP-binding subunit ClpA low > 63
Paraburkholderia bryophila 376MFSha3.1 0.29 H281DRAFT_04924 iron complex outermembrane recepter protein 0.61 H281DRAFT_04082 ATP-dependent Clp protease ATP-binding subunit ClpA low > 103
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS06675 TonB-dependent siderophore receptor 0.62 RALBFv3_RS04810 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum UW163 0.29 UW163_RS06950 TonB-dependent siderophore receptor 0.62 UW163_RS08860 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Variovorax sp. SCN45 0.28 GFF2438 Ferrichrome-iron receptor 0.62 GFF341 ATP-dependent Clp protease ATP-binding subunit ClpA low > 127
Pseudomonas sp. S08-1 0.28 OH686_02350 Ferrichrome-iron receptor 0.65 OH686_00235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.65 PfGW456L13_2646 ATP-dependent Clp protease ATP-binding subunit ClpA low > 87
Ralstonia solanacearum GMI1000 0.28 RS_RS14625 TonB-dependent siderophore receptor 0.63 RS_RS12370 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Ralstonia solanacearum PSI07 0.27 RPSI07_RS10550 TonB-dependent siderophore receptor 0.62 RPSI07_RS12575 ATP-dependent Clp protease ATP-binding subunit ClpA low > 81
Rhizobium sp. OAE497 0.26 ABIE40_RS21735 TonB-dependent siderophore receptor 0.58 ABIE40_RS08865 ATP-dependent Clp protease ATP-binding subunit ClpA low > 107
Rhodospirillum rubrum S1H 0.26 Rru_A2395 TonB-dependent siderophore receptor (NCBI) 0.59 Rru_A2109 ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) low > 58
Sinorhizobium meliloti 1021 0.26 SMc01657 ferrioxamine B receptor precursor protein 0.57 SMc02109 ATP-dependent Clp protease ATP-binding subunit protein — —
Marinobacter adhaerens HP15 0.25 HP15_3673 ferrichrome outer membrane transporter 0.67 HP15_2080 ATP-dependent Clp protease ATP-binding subunit ClpA low > 73
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS20275 TonB-denpendent receptor 0.61 BPHYT_RS15710 ATP-dependent Clp protease ATP-binding protein low > 109
Dechlorosoma suillum PS 0.25 Dsui_2950 TonB-dependent siderophore receptor 0.62 Dsui_0009 ATP-dependent Clp protease ATP-binding subunit clpA low > 51
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS22550 ligand-gated channel protein 0.64 HSERO_RS07030 ATP-dependent Clp protease ATP-binding protein — —
Acidovorax sp. GW101-3H11 0.24 Ac3H11_250 Ferrichrome-iron receptor 0.61 Ac3H11_2456 ATP-dependent Clp protease ATP-binding subunit ClpA low > 79
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3607 TonB-dependent siderophore receptor 0.57 Ga0059261_1001 ATP-dependent Clp protease ATP-binding subunit ClpA (EC 3.4.21.92) low > 68
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01065 TonB-dependent siderophore receptor 0.77 CSW01_05805 ATP-dependent Clp protease ATP-binding subunit ClpA low > 62
Shewanella amazonensis SB2B 0.20 Sama_2875 outer membrane protein (RefSeq) 0.70 Sama_2056 ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) low > 62
Bosea sp. OAE506 0.19 ABIE41_RS03600 TonB-dependent siderophore receptor 0.58 ABIE41_RS18235 ATP-dependent Clp protease ATP-binding subunit ClpA low > 77
Phaeobacter inhibens DSM 17395 0.19 PGA1_c25980 ferrichrome-iron receptor 0.57 PGA1_c25150 ATP-dependent Clp protease ATP-binding subunit low > 62
Alteromonas macleodii MIT1002 0.17 MIT1002_01786 Ferric hydroxamate uptake 0.70 MIT1002_01834 ATP-dependent Clp protease ATP-binding subunit ClpA low > 70
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_3124 TonB-dependent siderophore receptor 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_3124 TonB-dependent siderophore receptor 0.65 Psyr_3183 ATP-dependent Clp protease ATP-binding subunit ClpA low > 86
Cupriavidus basilensis FW507-4G11 0.15 RR42_RS31760 IclR family transcriptional regulator 0.62 RR42_RS17105 Clp protease ClpX low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF5752 Ferrichrome-iron receptor 0.61 GFF4521 ATP-dependent Clp protease ATP-binding subunit ClpA low > 90
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_05095 TonB-dependent receptor 0.65 AO353_27675 ATP-dependent Clp protease ATP-binding subunit ClpA low > 101
Xanthomonas campestris pv. campestris strain 8004 0.13 Xcc-8004.5299.1 Ferrichrome-iron receptor 0.62 Xcc-8004.2754.1 ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Acinetobacter radioresistens SK82 0.13 MPMX26_01925 Metal-pseudopaline receptor CntO 0.59 MPMX26_01284 ATP-dependent Clp protease ATP-binding subunit ClpA — —
Shewanella sp. ANA-3 0.12 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.70 Shewana3_1753 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.11 SO1156 TonB-dependent receptor (NCBI ptt file) 0.69 SO2626 clpA ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) low > 76
Caulobacter crescentus NA1000 0.11 CCNA_01856 ferrichrome-iron receptor 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 66
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_01856 ferrichrome-iron receptor 0.59 CCNA_02553 ATP-dependent clp protease ATP-binding subunit ClpA low > 67
Shewanella loihica PV-4 0.10 Shew_3841 TonB-dependent siderophore receptor (RefSeq) 0.70 Shew_1566 ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.06 LU632_RS10235 TonB-dependent siderophore receptor 0.89 LU632_RS09705 clpA ATP-dependent Clp protease ATP-binding subunit ClpA low > 74
Castellaniella sp019104865 MT123 0.05 ABCV34_RS06040 TonB-dependent receptor 0.60 ABCV34_RS05305 ATP-dependent Clp protease ATP-binding subunit ClpA low > 48

Not shown: 4 genomes with orthologs for ECD_00149 only; 10 genomes with orthologs for ECD_00887 only