| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Escherichia coli BL21 | 1.0 | ECD_01634 | | multidrug efflux system transporter | 1.0 | ECD_00393 | | periplasmic folding chaperone, has an inactive PPIase domain | 0.58 | 10 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02061 | | Multidrug resistance protein MdtK | 1.00 | OHPLBJKB_03232 | | Peptidyl-prolyl cis-trans isomerase D | low | > 73 |
| Escherichia coli BW25113 | 1.00 | b1663 | mdtK | multidrug efflux protein NorM (NCBI) | 1.00 | b0441 | ppiD | peptidyl-prolyl cis-trans isomerase (rotamase D) (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 1.00 | EFB2_02329 | | Multidrug resistance protein MdtK | 1.00 | EFB2_03616 | | Peptidyl-prolyl cis-trans isomerase D | low | > 86 |
| Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS09270 | | multidrug efflux MATE transporter MdtK | 1.00 | ECOLIN_RS02645 | | peptidylprolyl isomerase | — | — |
| Escherichia coli ECOR38 | 1.00 | HEPCGN_05745 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | HEPCGN_06925 | ppiD | peptidylprolyl isomerase | low | > 85 |
| Escherichia coli ECRC62 | 1.00 | BNILDI_16670 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | BNILDI_22660 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECOR27 | 1.00 | NOLOHH_17880 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | NOLOHH_01245 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC99 | 1.00 | KEDOAH_00750 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | KEDOAH_19655 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC98 | 1.00 | JDDGAC_01950 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | JDDGAC_11965 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC101 | 1.00 | MCAODC_18050 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | MCAODC_27535 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC102 | 1.00 | NIAGMN_00705 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | NIAGMN_06365 | ppiD | peptidylprolyl isomerase | — | — |
| Escherichia coli ECRC101 | 1.00 | OKFHMN_27360 | mdtK | multidrug efflux MATE transporter MdtK | 1.00 | OKFHMN_08310 | ppiD | peptidylprolyl isomerase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.92 | GFF3613 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.87 | GFF4357 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 78 |
| Enterobacter sp. TBS_079 | 0.91 | MPMX20_01973 | | Multidrug resistance protein MdtK | 0.85 | MPMX20_01032 | | Peptidyl-prolyl cis-trans isomerase D | low | > 85 |
| Klebsiella michiganensis M5al | 0.89 | BWI76_RS16535 | | MATE family efflux transporter | 0.80 | BWI76_RS06545 | | peptidylprolyl isomerase | low | > 92 |
| Enterobacter asburiae PDN3 | 0.89 | EX28DRAFT_1660 | | putative efflux protein, MATE family | 0.85 | EX28DRAFT_2529 | | Parvulin-like peptidyl-prolyl isomerase | 0.65 | 9 |
| Serratia liquefaciens MT49 | 0.77 | IAI46_11210 | | MATE family efflux transporter | 0.57 | IAI46_05030 | | peptidylprolyl isomerase | low | > 86 |
| Pantoea sp. MT58 | 0.76 | IAI47_10820 | | MATE family efflux transporter | 0.68 | IAI47_14635 | | peptidylprolyl isomerase | low | > 76 |
| Pectobacterium carotovorum WPP14 | 0.73 | HER17_RS09220 | | MATE family efflux transporter | 0.57 | HER17_RS15830 | | peptidylprolyl isomerase | low | > 75 |
| Dickeya dianthicola 67-19 | 0.73 | HGI48_RS12700 | | MATE family efflux transporter | 0.57 | HGI48_RS05705 | | peptidylprolyl isomerase | low | > 71 |
| Dickeya dianthicola ME23 | 0.73 | DZA65_RS13155 | | MATE family efflux transporter | 0.57 | DZA65_RS06030 | | peptidylprolyl isomerase | low | > 75 |
| Erwinia tracheiphila SCR3 | 0.72 | LU632_RS11170 | | MATE family efflux transporter | 0.69 | LU632_RS18325 | ppiD | peptidylprolyl isomerase | low | > 74 |
| Rahnella sp. WP5 | 0.72 | EX31_RS13855 | | MATE family efflux transporter | 0.53 | EX31_RS22265 | | peptidylprolyl isomerase | low | > 89 |
| Vibrio cholerae E7946 ATCC 55056 | 0.56 | CSW01_07735 | | multidrug resistance protein NorM | 0.32 | CSW01_09595 | | peptidylprolyl isomerase | low | > 62 |
| Shewanella loihica PV-4 | 0.50 | Shew_2037 | | MATE efflux family protein (RefSeq) | 0.27 | Shew_2504 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.50 | Shewana3_2039 | | MATE efflux family protein (RefSeq) | 0.27 | Shewana3_2657 | | PpiC-type peptidyl-prolyl cis-trans isomerase (RefSeq) | low | > 73 |
| Shewanella oneidensis MR-1 | 0.50 | SO2295 | | MATE efflux family protein (NCBI ptt file) | 0.28 | SO1798 | ppiD | peptidyl-prolyl cis-trans isomerase D (NCBI ptt file) | low | > 76 |
| Shewanella amazonensis SB2B | 0.49 | Sama_1761 | | MATE efflux family protein (RefSeq) | 0.27 | Sama_1228 | | peptidyl-prolyl cis-trans isomerase D (RefSeq) | low | > 62 |
| Pseudomonas sp. S08-1 | 0.43 | OH686_02075 | | Na(+)/drug antiporter, MATE family of MDR efflux pumps | 0.19 | OH686_03625 | | Peptidyl-prolyl cis-trans isomerase PpiD | low | > 80 |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_02233 | | Na(+)/drug antiporter | 0.23 | MIT1002_02755 | | Peptidyl-prolyl cis-trans isomerase D | 0.66 | 27 |
| Pseudomonas fluorescens GW456-L13 | 0.41 | PfGW456L13_4049 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.19 | PfGW456L13_2556 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.41 | AO353_00550 | | MATE family efflux transporter | 0.20 | AO353_20200 | | peptidylprolyl isomerase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.41 | PFLU_RS07610 | | MATE family efflux transporter | 0.19 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.41 | PFLU_RS07610 | | MATE family efflux transporter | 0.19 | PFLU_RS19150 | | peptidyl-prolyl cis-trans isomerase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.41 | Pf1N1B4_3892 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.20 | Pf1N1B4_3949 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas sp. RS175 | 0.41 | PFR28_01102 | | Multidrug resistance protein NorM | 0.20 | PFR28_01231 | | Peptidyl-prolyl cis-trans isomerase D | low | > 88 |
| Pseudomonas simiae WCS417 | 0.41 | PS417_07530 | | multidrug transporter | 0.18 | PS417_17215 | | peptidylprolyl isomerase | low | > 88 |
| Pseudomonas fluorescens FW300-N2E2 | 0.41 | Pf6N2E2_2298 | | Multi antimicrobial extrusion protein (Na(+)/drug antiporter), MATE family of MDR efflux pumps | 0.19 | Pf6N2E2_2214 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.41 | AO356_02370 | | MATE family efflux transporter | 0.20 | AO356_01725 | | peptidylprolyl isomerase | — | — |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_2549 | | putative efflux protein, MATE family | 0.19 | Psest_2283 | | Parvulin-like peptidyl-prolyl isomerase | — | — |
| Marinobacter adhaerens HP15 | 0.35 | HP15_3913 | | multidrug resistance protein NorM | 0.17 | HP15_2181 | | PpiC-type peptidyl-prolyl cis-trans isomerase | 0.55 | 17 |
| Dyella japonica UNC79MFTsu3.2 | 0.31 | ABZR86_RS12525 | | MATE family efflux transporter | 0.18 | ABZR86_RS07300 | | SurA N-terminal domain-containing protein | low | > 74 |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_00306 | | Multidrug resistance protein NorM | 0.11 | MPMX26_01332 | | Peptidyl-prolyl cis-trans isomerase D | low | > 36 |
| Rhodanobacter denitrificans MT42 | 0.30 | LRK55_RS10790 | | MATE family efflux transporter | 0.16 | LRK55_RS16480 | | SurA N-terminal domain-containing protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.30 | LRK54_RS11085 | | MATE family efflux transporter | 0.17 | LRK54_RS16755 | | SurA N-terminal domain-containing protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.29 | OKGIIK_12790 | norM | MATE family efflux transporter | 0.17 | OKGIIK_08010 | | Peptidylprolyl isomerase | low | > 52 |
| Kangiella aquimarina DSM 16071 | 0.26 | B158DRAFT_2495 | | putative efflux protein, MATE family | 0.16 | B158DRAFT_1042 | | Parvulin-like peptidyl-prolyl isomerase | low | > 40 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.24 | Xcc-8004.4760.1 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM | 0.15 | Xcc-8004.4039.1 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 74 |
| Herbaspirillum seropedicae SmR1 | 0.23 | HSERO_RS04300 | | multidrug transporter MatE | 0.13 | HSERO_RS11155 | | peptidyl-prolyl cis-trans isomerase | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.23 | ABIE53_002038 | | MATE family multidrug resistance protein | 0.13 | ABIE53_002134 | | peptidyl-prolyl cis-trans isomerase D | low | > 113 |
| Lysobacter sp. OAE881 | 0.23 | ABIE51_RS02170 | | MATE family efflux transporter | 0.16 | ABIE51_RS14120 | | peptidyl-prolyl cis-trans isomerase | low | > 62 |
| Ralstonia sp. UNC404CL21Col | 0.23 | ABZR87_RS10730 | | MATE family efflux transporter | 0.14 | ABZR87_RS12765 | | SurA N-terminal domain-containing protein | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.22 | RR42_RS13335 | | multidrug transporter MatE | 0.14 | RR42_RS09045 | | peptidylprolyl isomerase | low | > 128 |
| Burkholderia phytofirmans PsJN | 0.22 | BPHYT_RS09015 | | multidrug transporter MatE | 0.13 | BPHYT_RS09480 | | peptidyl-prolyl cis-trans isomerase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.22 | UW163_RS12570 | | MATE family efflux transporter | 0.16 | UW163_RS14630 | | peptidylprolyl isomerase | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.22 | H281DRAFT_00822 | | multidrug resistance protein, MATE family | 0.13 | H281DRAFT_00902 | | peptidyl-prolyl cis-trans isomerase D | low | > 103 |
| Ralstonia solanacearum IBSBF1503 | 0.22 | RALBFv3_RS15100 | | MATE family efflux transporter | 0.16 | RALBFv3_RS01320 | | peptidylprolyl isomerase | low | > 76 |
| Variovorax sp. OAS795 | 0.22 | ABID97_RS14630 | | MATE family efflux transporter | 0.14 | ABID97_RS10675 | | SurA N-terminal domain-containing protein | low | > 91 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_0755 | | MATE efflux family protein (RefSeq) | 0.09 | Dshi_1795 | | putative peptidyl-prolyl cis-trans isomerse D (RefSeq) | — | — |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS05915 | | MATE family efflux transporter | 0.16 | RS_RS08675 | | peptidyl-prolyl cis-trans isomerase | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.21 | RPSI07_RS18275 | | MATE family efflux transporter | 0.16 | RPSI07_RS16155 | | peptidylprolyl isomerase | low | > 81 |
| Rhodopseudomonas palustris CGA009 | 0.21 | TX73_004890 | | MATE family efflux transporter | 0.11 | TX73_014975 | | SurA N-terminal domain-containing protein | low | > 86 |
| Paraburkholderia sabiae LMG 24235 | 0.21 | QEN71_RS04380 | | MATE family efflux transporter | 0.14 | QEN71_RS21955 | | SurA N-terminal domain-containing protein | 0.77 | 2 |
| Rhizobium sp. OAE497 | 0.20 | ABIE40_RS12780 | | MATE family efflux transporter | 0.09 | ABIE40_RS09540 | | peptidylprolyl isomerase | low | > 107 |
| Phaeobacter inhibens DSM 17395 | 0.20 | PGA1_c21310 | | multidrug resistance protein NorM | 0.08 | PGA1_c16850 | | putative peptidyl-prolyl cis-trans isomerase D | low | > 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.19 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.17 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.19 | Psyr_0073 | | Multi antimicrobial extrusion protein MatE | 0.17 | Psyr_1751 | | PpiC-type peptidyl-prolyl cis-trans isomerase | low | > 86 |
| Rhodospirillum rubrum S1H | 0.19 | Rru_A0697 | | Multi antimicrobial extrusion protein MatE (NCBI) | 0.12 | Rru_A1890 | | hypothetical protein (NCBI) | low | > 58 |
| Variovorax sp. SCN45 | 0.19 | GFF1099 | | Na+-driven multidrug efflux pump | 0.13 | GFF2852 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | low | > 127 |
| Pseudomonas putida KT2440 | 0.19 | PP_5262 | | Probable multidrug resistance protein NorM | 0.18 | PP_2304 | | putative Peptidyl-prolyl cis-trans isomerase D | low | > 96 |
| Acidovorax sp. GW101-3H11 | 0.17 | Ac3H11_463 | | Multidrug and toxin extrusion (MATE) family efflux pump YdhE/NorM, homolog | 0.11 | Ac3H11_377 | | Peptidyl-prolyl cis-trans isomerase PpiD (EC 5.2.1.8) | — | — |
| Dechlorosoma suillum PS | 0.16 | Dsui_1442 | | putative efflux protein, MATE family | 0.18 | Dsui_2202 | | parvulin-like peptidyl-prolyl isomerase | low | > 51 |
| Azospirillum brasilense Sp245 | 0.13 | AZOBR_RS15325 | | multidrug transporter | 0.14 | AZOBR_RS07495 | | peptidylprolyl isomerase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.12 | MPMX19_01223 | | Multidrug resistance protein NorM | 0.11 | MPMX19_00894 | | Peptidyl-prolyl cis-trans isomerase D | — | — |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.10 | DVU1217 | | MATE efflux family protein (TIGR) | 0.11 | DVU1065 | | peptidyl-prolyl cis-trans isomerse domain protein (TIGR) | low | > 55 |
Not shown: 17 genomes with orthologs for ECD_01634 only; 6 genomes with orthologs for ECD_00393 only