| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07790 | | glycerol-3-phosphate transporter permease | 1.0 | CSW01_13550 | | O-succinylhomoserine (thiol)-lyase | 0.53 | 8 |
| Phaeobacter inhibens DSM 17395 | 0.57 | PGA1_c02720 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.32 | PGA1_c16600 | | methionine gamma-lyase MdeA | low | > 62 |
| Bosea sp. OAE506 | 0.54 | ABIE41_RS03455 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.27 | ABIE41_RS19270 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 77 |
| Agrobacterium fabrum C58 | 0.53 | Atu0306 | | ABC transporter, membrane spanning protein (sn-Glycerol-3-phosphate) | 0.27 | Atu0432 | | O-succinylhomoserine sulfhydrylase | low | > 89 |
| Sinorhizobium meliloti 1021 | 0.52 | SM_b20417 | | glycerol-3-phosphate ABC transporter permease | 0.47 | SMc02595 | | cystathionine gamma-synthase | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.50 | HSERO_RS18950 | | glycerol-3-phosphate transporter permease | 0.22 | HSERO_RS18310 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 78 |
| Azospirillum brasilense Sp245 | 0.50 | AZOBR_RS00070 | | glycerol-3-phosphate transporter permease | 0.27 | AZOBR_RS11340 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 97 |
| Castellaniella sp019104865 MT123 | 0.50 | ABCV34_RS03600 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.30 | ABCV34_RS15785 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 48 |
| Rhizobium sp. OAE497 | 0.50 | ABIE40_RS20840 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.27 | ABIE40_RS02340 | | O-succinylhomoserine sulfhydrylase | low | > 107 |
| Cupriavidus basilensis FW507-4G11 | 0.49 | RR42_RS12965 | | glycerol-3-phosphate transporter permease | 0.26 | RR42_RS06465 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 128 |
| Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_4787 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.31 | Ac3H11_34 | | Methionine gamma-lyase (EC 4.4.1.11) | low | > 79 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_05703 | | glycerol 3-phosphate ABC transporter membrane protein /carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.26 | H281DRAFT_06059 | | O-succinylhomoserine sulfhydrylase | low | > 103 |
| Paraburkholderia graminis OAS925 | 0.48 | ABIE53_003652 | | sn-glycerol 3-phosphate transport system permease protein | 0.26 | ABIE53_004817 | | O-succinylhomoserine sulfhydrylase | low | > 113 |
| Ralstonia solanacearum PSI07 | 0.48 | RPSI07_RS17795 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.25 | RPSI07_RS15620 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 81 |
| Ralstonia solanacearum GMI1000 | 0.48 | RS_RS06340 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.25 | RS_RS07865 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.48 | ABZR87_RS11090 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.27 | ABZR87_RS17575 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | low | > 80 |
| Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS17460 | | glycerol-3-phosphate transporter permease | 0.26 | BPHYT_RS33835 | | O-succinylhomoserine sulfhydrylase | low | > 109 |
| Ralstonia solanacearum UW163 | 0.47 | UW163_RS13020 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.25 | UW163_RS15180 | | O-acetylhomoserine aminocarboxypropyltransferase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.47 | RALBFv3_RS15560 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.25 | RALBFv3_RS01870 | | O-acetylhomoserine aminocarboxypropyltransferase | low | > 76 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_00484 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.32 | MPMX19_06514 | | L-methionine gamma-lyase | low | > 112 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.46 | GFF1260 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.29 | GFF301 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | low | > 90 |
| Variovorax sp. SCN45 | 0.46 | GFF2536 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.28 | GFF3088 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) @ O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.46 | Dshi_2015 | | binding-protein-dependent transport systems inner membrane component (RefSeq) | 0.26 | Dshi_1002 | | Cystathionine gamma-synthase (RefSeq) | low | > 64 |
| Paraburkholderia sabiae LMG 24235 | 0.46 | QEN71_RS27610 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.25 | QEN71_RS17685 | | O-succinylhomoserine sulfhydrylase | low | > 153 |
| Xanthobacter sp. DMC5 | 0.46 | GFF1486 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.25 | GFF697 | | O-acetyl-L-homoserine sulfhydrylase | — | — |
| Variovorax sp. OAS795 | 0.45 | ABID97_RS07225 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.27 | ABID97_RS21630 | | O-succinylhomoserine sulfhydrylase | — | — |
| Rhodopseudomonas palustris CGA009 | 0.45 | TX73_000295 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.30 | TX73_012185 | | PLP-dependent aspartate aminotransferase family protein | low | > 86 |
| Rahnella sp. WP5 | 0.44 | EX31_RS14755 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.56 | EX31_RS14215 | | cystathionine gamma-synthase | low | > 89 |
| Erwinia amylovora T8 | 0.43 | OLJFJH_04325 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.54 | OLJFJH_06095 | | cystathionine gamma-synthase | low | > 58 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS00615 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.60 | HER17_RS00910 | | cystathionine gamma-synthase | low | > 75 |
| Pantoea sp. MT58 | 0.43 | IAI47_01595 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.55 | IAI47_00880 | | cystathionine gamma-synthase | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.43 | PagCFBP13505_RS18110 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.56 | PagCFBP13505_RS18460 | | cystathionine gamma-synthase | low | > 74 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_00995 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | IAI46_24540 | | cystathionine gamma-synthase | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF556 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.59 | GFF2323 | | Cystathionine gamma-synthase (EC 2.5.1.48) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4284 | | ABC-type sugar transport systems, permease components | 0.59 | EX28DRAFT_4411 | | cystathionine gamma-synthase (EC 2.5.1.48) | low | > 76 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04328 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.59 | MPMX20_04531 | | Cystathionine gamma-synthase | low | > 85 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS26300 | | glycerol-3-phosphate transporter permease | 0.58 | BWI76_RS00785 | | cystathionine gamma-synthase | low | > 92 |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_15595 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | HEPCGN_12345 | metB | cystathionine gamma-synthase | low | > 88 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.41 | OHPLBJKB_00251 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.59 | OHPLBJKB_04111 | | Cystathionine gamma-synthase | low | > 74 |
| Escherichia coli BW25113 | 0.41 | b3452 | ugpA | glycerol-3-phosphate transporter subunit (NCBI) | 0.59 | b3939 | metB | cystathionine gamma-synthase (NCBI) | low | > 76 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS19740 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | ECOLIN_RS22725 | | cystathionine gamma-synthase | low | > 55 |
| Escherichia coli ECRC62 | 0.41 | BNILDI_02940 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | BNILDI_05715 | metB | cystathionine gamma-synthase | low | > 75 |
| Escherichia coli ECOR27 | 0.41 | NOLOHH_08565 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | NOLOHH_05820 | metB | cystathionine gamma-synthase | low | > 76 |
| Escherichia coli BL21 | 0.41 | ECD_03301 | | sn-glycerol-3-phosphate ABC transporter permease | 0.59 | ECD_03825 | | cystathionine gamma-synthase, PLP-dependent | low | > 61 |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_20405 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | JDDGAC_17300 | metB | cystathionine gamma-synthase | low | > 87 |
| Escherichia coli ECRC101 | 0.41 | MCAODC_07305 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | MCAODC_04175 | metB | cystathionine gamma-synthase | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.41 | KDGMDA_07175 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | KDGMDA_09295 | | cystathionine gamma-synthase | low | > 95 |
| Escherichia coli ECRC100 | 0.41 | OKFHMN_16775 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | OKFHMN_13675 | metB | cystathionine gamma-synthase | low | > 79 |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_11365 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | KEDOAH_14485 | metB | cystathionine gamma-synthase | — | — |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_14545 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | NIAGMN_11430 | metB | cystathionine gamma-synthase | low | > 80 |
| Escherichia fergusonii Becca | 0.40 | EFB2_00370 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.59 | EFB2_04679 | | Cystathionine gamma-synthase | low | > 86 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS21660 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.58 | DZA65_RS21470 | | cystathionine gamma-synthase | low | > 75 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00725 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.59 | DDA3937_RS00950 | | cystathionine gamma-synthase | low | > 74 |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS20645 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.58 | HGI48_RS20425 | | cystathionine gamma-synthase | low | > 71 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.30 | Psyr_1669 | | O-succinylhomoserine sulfhydrylase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.30 | Psyr_1669 | | O-succinylhomoserine sulfhydrylase | low | > 86 |
| Mycobacterium tuberculosis H37Rv | 0.20 | Rv2316 | | Probable sugar-transport integral membrane protein ABC transporter UspA | 0.37 | Rv1079 | | Cystathionine gamma-synthase MetB (CGS) (O-succinylhomoserine [thiol]-lyase) | low | > 58 |
| Rhodospirillum rubrum S1H | 0.20 | Rru_A1261 | | Binding-protein-dependent transport systems inner membrane component (NCBI) | 0.35 | Rru_A0786 | | Cystathionine gamma-synthase (NCBI) | low | > 58 |
| Synechococcus elongatus PCC 7942 | 0.18 | Synpcc7942_0526 | lacF | ABC-type sugar transport systems permease components-like | 0.21 | Synpcc7942_0370 | metY | O-acetylhomoserine/O-acetylserine sulfhydrylase | low | > 38 |
| Rhodanobacter denitrificans FW104-10B01 | 0.18 | LRK54_RS08650 | | sugar ABC transporter permease | 0.55 | LRK54_RS05305 | | cystathionine gamma-synthase | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.18 | LRK55_RS08415 | | sugar ABC transporter permease | 0.56 | LRK55_RS05085 | | cystathionine gamma-synthase | low | > 63 |
| Bifidobacterium breve UCC2003 | 0.17 | BBR_RS20185 | | sugar ABC transporter permease | 0.35 | BBR_RS13145 | | cystathionine gamma-synthase | low | > 34 |
| Rhodanobacter sp. FW510-T8 | 0.17 | OKGIIK_15410 | ugpA | sugar ABC transporter permease | 0.55 | OKGIIK_01515 | metB | cystathionine gamma-synthase | low | > 53 |
| Lysobacter sp. OAE881 | 0.17 | ABIE51_RS08820 | | sugar ABC transporter permease | 0.52 | ABIE51_RS16185 | | O-succinylhomoserine (thiol)-lyase | low | > 62 |
| Rhodanobacter sp000427505 FW510-R12 | 0.17 | LRK53_RS02420 | | sugar ABC transporter permease | 0.54 | LRK53_RS04700 | | cystathionine gamma-synthase | low | > 59 |
| Dyella japonica UNC79MFTsu3.2 | 0.16 | ABZR86_RS14905 | | sugar ABC transporter permease | 0.54 | ABZR86_RS19030 | | cystathionine gamma-synthase | low | > 74 |
| Pseudomonas putida KT2440 | 0.16 | PP_1016 | | mannose/glucose ABC transporter, permease protein | 0.34 | PP_4594 | | putative Cystathionine gamma-synthase | low | > 96 |
| Pseudomonas sp. BP01 | 0.16 | JOY50_RS11420 | | carbohydrate ABC transporter permease | 0.34 | JOY50_RS01570 | | PLP-dependent aspartate aminotransferase family protein | low | > 84 |
| Pseudomonas fluorescens FW300-N2C3 | 0.15 | AO356_27675 | | sugar ABC transporter permease | 0.30 | AO356_21470 | | O-succinylhomoserine sulfhydrylase | low | > 104 |
| Pseudomonas fluorescens GW456-L13 | 0.15 | PfGW456L13_3041 | | Various polyols ABC transporter, permease component 1 | 0.30 | PfGW456L13_3934 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.15 | Pf6N2E2_809 | | Various polyols ABC transporter, permease component 1 | 0.30 | Pf6N2E2_77 | | O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) | low | > 103 |
| Pseudomonas lactucae CFBP13502 | 0.15 | GEMAOFIL_02790 | | Lactose transport system permease protein LacF | 0.37 | GEMAOFIL_02861 | | Cystathionine beta-lyase | — | — |
| Pseudomonas segetis P6 | 0.15 | ACVTMO_RS14050 | | carbohydrate ABC transporter permease | 0.33 | ACVTMO_RS05450 | | trans-sulfuration enzyme family protein | low | > 75 |
| Pseudomonas sp. RS175 | 0.15 | PFR28_01712 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.30 | PFR28_02810 | | O-succinylhomoserine sulfhydrylase | low | > 88 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_12710 | | ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) | 0.32 | PS417_11735 | | methionine gamma-lyase | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | 0.36 | PFLU_RS16625 | | cystathionine gamma-synthase | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.15 | Pf1N1B4_4849 | | Various polyols ABC transporter, permease component 1 | 0.38 | Pf1N1B4_4890 | | Cystathionine gamma-lyase (EC 4.4.1.1) | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | 0.36 | PFLU_RS16625 | | cystathionine gamma-synthase | low | > 109 |
| Pseudomonas fluorescens FW300-N2E3 | 0.15 | AO353_25885 | | sugar ABC transporter permease | 0.38 | AO353_23295 | | cystathionine beta-lyase | low | > 101 |
| Pseudomonas orientalis W4I3 | 0.15 | QF045_RS17185 | | sugar ABC transporter permease | 0.36 | QF045_RS15175 | | cystathionine gamma-synthase | low | > 93 |
| Pseudomonas sp. DMC3 | 0.15 | GFF2896 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.38 | GFF3060 | | Cystathionine beta-lyase | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.15 | Psest_1897 | | ABC-type sugar transport systems, permease components | 0.32 | Psest_2578 | | O-succinylhomoserine sulfhydrylase | 0.27 | 47 |
| Pseudomonas aeruginosa MRSN321 | 0.14 | DY961_RS18090 | | sugar ABC transporter permease | 0.37 | DY961_RS21980 | | cystathionine gamma-synthase | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.14 | DQ20_RS59325 | | sugar ABC transporter permease | 0.37 | DQ20_RS37320 | | cystathionine gamma-synthase | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.14 | IKLFDK_11455 | | sugar ABC transporter permease | 0.37 | IKLFDK_23420 | | cystathionine gamma-synthase | low | > 98 |
| Pseudomonas sp. S08-1 | 0.14 | OH686_02465 | | Glucose ABC transport system, inner membrane component 1 | 0.31 | OH686_04415 | | O-succinylhomoserine sulfhydrylase | low | > 80 |
| Marinobacter adhaerens HP15 | 0.14 | HP15_2957 | | sugar ABC transporter, permease protein | 0.27 | HP15_1820 | | methionine gamma-lyase | low | > 73 |
| Pseudomonas sp. SVBP6 | 0.14 | COO64_RS04560 | | carbohydrate ABC transporter permease | 0.37 | COO64_RS14890 | | cystathionine gamma-synthase | low | > 93 |
Not shown: 2 genomes with orthologs for CSW01_07790 only; 31 genomes with orthologs for CSW01_13550 only