Conservation of cofitness between CSW01_09445 and CSW01_12345 in Vibrio cholerae E7946 ATCC 55056

92 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09445 transcription-repair coupling factor 1.0 CSW01_12345 [glutamate--ammonia-ligase] adenylyltransferase 0.60 2
Rahnella sp. WP5 0.65 EX31_RS24520 transcription-repair coupling factor 0.55 EX31_RS08145 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 89
Escherichia coli ECOR38 0.65 HEPCGN_24015 mfd transcription-repair coupling factor 0.56 HEPCGN_17585 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 88
Serratia liquefaciens MT49 0.64 IAI46_10320 transcription-repair coupling factor 0.54 IAI46_22060 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 86
Escherichia coli BW25113 0.64 b1114 mfd transcription-repair coupling factor (NCBI) 0.56 b3053 glnE fused deadenylyltransferase/adenylyltransferase for glutamine synthetase (NCBI) low > 76
Escherichia coli ECRC101 0.64 MCAODC_22830 mfd transcription-repair coupling factor 0.55 MCAODC_09245 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 88
Escherichia coli ECRC99 0.64 KEDOAH_24285 mfd transcription-repair coupling factor 0.55 KEDOAH_09415 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase — —
Escherichia coli ECRC102 0.64 NIAGMN_24360 mfd transcription-repair coupling factor 0.55 NIAGMN_16495 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 80
Escherichia fergusonii Becca 0.64 EFB2_02861 Transcription-repair-coupling factor 0.56 EFB2_00758 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 86
Escherichia coli ECRC100 0.64 OKFHMN_03470 mfd transcription-repair coupling factor 0.55 OKFHMN_18730 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 79
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_02552 Transcription-repair-coupling factor 0.56 OHPLBJKB_00651 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 74
Escherichia coli ECRC98 0.64 JDDGAC_07130 mfd transcription-repair coupling factor 0.56 JDDGAC_22365 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 87
Escherichia coli ECOR27 0.64 NOLOHH_20995 mfd transcription-repair coupling factor 0.56 NOLOHH_10515 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 76
Escherichia coli ECRC62 0.64 BNILDI_19160 mfd transcription-repair coupling factor 0.56 BNILDI_01000 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 75
Escherichia coli BL21 0.64 ECD_01110 transcription-repair coupling factor 0.55 ECD_02923 fused deadenylyltransferase/adenylyltransferase for glutamine synthetase low > 61
Pectobacterium carotovorum WPP14 0.64 HER17_RS08775 transcription-repair coupling factor 0.56 HER17_RS04035 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 75
Pantoea sp. MT58 0.64 IAI47_11975 transcription-repair coupling factor 0.53 IAI47_03100 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 76
Klebsiella michiganensis M5al 0.64 BWI76_RS11205 transcription-repair coupling factor 0.55 BWI76_RS24460 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase low > 92
Enterobacter asburiae PDN3 0.64 EX28DRAFT_1816 transcription-repair coupling factor (mfd) 0.54 EX28DRAFT_3081 Glutamine synthetase adenylyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3397 Transcription-repair coupling factor 0.53 GFF3167 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 78
Enterobacter sp. TBS_079 0.64 MPMX20_01795 Transcription-repair-coupling factor 0.55 MPMX20_03890 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 85
Dickeya dadantii 3937 0.64 DDA3937_RS13000 transcription-repair coupling factor 0.53 DDA3937_RS17105 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 74
Erwinia amylovora T8 0.64 OLJFJH_15445 transcription-repair coupling factor 0.54 OLJFJH_07635 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 58
Dickeya dianthicola 67-19 0.64 HGI48_RS13065 transcription-repair coupling factor 0.53 HGI48_RS17155 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 71
Pantoea agglomerans CFBP13505 P0401 0.64 PagCFBP13505_RS19410 transcription-repair coupling factor 0.53 PagCFBP13505_RS11920 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 74
Dickeya dianthicola ME23 0.63 DZA65_RS13530 transcription-repair coupling factor 0.53 DZA65_RS18240 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 75
Erwinia tracheiphila SCR3 0.63 LU632_RS14730 mfd transcription-repair coupling factor 0.51 LU632_RS20675 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 74
Klebsiella pneumoniae MKP103 0.63 KDGMDA_18800 transcription-repair coupling factor 0.54 KDGMDA_05270 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 95
Erwinia tracheiphila HP pepo 2.2 0.63 IJEDHG_00560 mfd transcription-repair coupling factor 0.51 IJEDHG_14385 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase low > 61
Shewanella loihica PV-4 0.58 Shew_1630 transcription-repair coupling factor (RefSeq) 0.47 Shew_0628 (glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.57 MIT1002_01646 Transcription-repair-coupling factor 0.39 MIT1002_02879 Glutamate-ammonia-ligase adenylyltransferase low > 70
Shewanella oneidensis MR-1 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) 0.47 SO3760 glnE glutamate-ammonia-ligase adenylyltransferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) 0.47 Shewana3_0832 glutamate-ammonia ligase adenylyltransferase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.55 Sama_1330 transcription-repair coupling factor (RefSeq) 0.46 Sama_2663 (glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.55 Psest_1653 transcription-repair coupling factor (mfd) 0.41 Psest_0449 Glutamine synthetase adenylyltransferase low > 67
Pseudomonas aeruginosa PA14 0.55 IKLFDK_15275 transcription-repair coupling factor 0.41 IKLFDK_28465 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 100
Pseudomonas sp. S08-1 0.55 OH686_21990 transcription-repair coupling factor 0.41 OH686_09700 Glutamine synthetase adenylyl-L-tyrosine phosphorylase / Glutamate-ammonia-ligase adenylyltransferase low > 80
Pseudomonas sp. SVBP6 0.54 COO64_RS09460 mfd transcription-repair coupling factor 0.41 COO64_RS22835 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 93
Pseudomonas segetis P6 0.54 MPMX49_01844 Transcription-repair-coupling factor 0.42 MPMX49_04210 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 75
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_1896 transcription-repair coupling factor 0.40 Psyr_0519 Glutamate-ammonia-ligase adenylyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_1896 transcription-repair coupling factor 0.40 Psyr_0519 Glutamate-ammonia-ligase adenylyltransferase low > 86
Pseudomonas sp. BP01 0.54 JOY50_RS25100 mfd transcription-repair coupling factor 0.40 JOY50_RS17815 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 84
Pseudomonas putida KT2440 0.54 PP_2148 transcription-repair coupling factor 0.40 PP_0340 Glutamate-ammonia-ligase adenylyltransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_3916 Transcription-repair coupling factor 0.42 Pf1N1B4_1474 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_00435 transcription-repair coupling factor 0.42 AO353_12870 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 0.34 88
Pseudomonas sp. RS175 0.54 PFR28_01123 Transcription-repair-coupling factor 0.40 PFR28_05062 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme 0.26 82
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4027 Transcription-repair coupling factor 0.41 PfGW456L13_213 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 87
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_2278 Transcription-repair coupling factor 0.40 Pf6N2E2_3672 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 103
Pseudomonas simiae WCS417 0.53 PS417_07635 transcription-repair coupling factor 0.41 PS417_02225 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_02270 transcription-repair coupling factor 0.40 AO356_08955 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase low > 104
Pseudomonas lactucae CFBP13502 0.53 GEMAOFIL_01659 Transcription-repair-coupling factor 0.41 GEMAOFIL_00681 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 93
Pseudomonas fluorescens SBW25 0.53 PFLU_RS07710 transcription-repair coupling factor 0.41 PFLU_RS02280 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 109
Pseudomonas sp. DMC3 0.53 GFF1285 Transcription-repair-coupling factor 0.42 GFF3155 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 89
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS07710 transcription-repair coupling factor 0.41 PFLU_RS02280 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 109
Marinobacter adhaerens HP15 0.52 HP15_2257 transcription-repair-coupling factor 0.41 HP15_435 glutamate-ammonia-ligase adenylyltransferase low > 73
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1800 transcription-repair coupling factor 0.33 B158DRAFT_0849 Glutamine synthetase adenylyltransferase low > 40
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS02040 transcription-repair coupling factor 0.29 LRK54_RS06750 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 59
Rhodanobacter denitrificans MT42 0.49 LRK55_RS01815 transcription-repair coupling factor 0.29 LRK55_RS06495 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 63
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS21210 transcription-repair coupling factor 0.29 ABZR86_RS17150 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 74
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_09105 mfd transcription-repair coupling factor 0.28 OKGIIK_16880 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 53
Lysobacter sp. OAE881 0.49 ABIE51_RS14320 transcription-repair coupling factor 0.27 ABIE51_RS17670 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 62
Rhodanobacter sp000427505 FW510-R12 0.49 LRK53_RS08005 transcription-repair coupling factor 0.29 LRK53_RS01670 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 59
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.1775.1 Transcription-repair coupling factor 0.28 Xcc-8004.723.1 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 74
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13240 transcription-repair coupling factor 0.27 ABZR87_RS01090 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 80
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS22060 transcription-repair coupling factor 0.25 QEN71_RS26540 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 153
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS09290 helicase 0.26 BPHYT_RS03555 glutamine-synthetase adenylyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00880 transcription-repair coupling factor 0.25 H281DRAFT_04691 glutamate-ammonia-ligase adenylyltransferase low > 103
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS15180 transcription-repair coupling factor 0.26 HSERO_RS07140 glutamine-synthetase adenylyltransferase low > 78
Methylophilus sp. DMC18 0.46 GFF356 Transcription-repair-coupling factor 0.29 GFF995 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 43
Ralstonia solanacearum UW163 0.46 UW163_RS14755 transcription-repair coupling factor 0.27 UW163_RS08185 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01445 transcription-repair coupling factor 0.27 RALBFv3_RS05440 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 76
Ralstonia solanacearum GMI1000 0.46 RS_RS08275 transcription-repair coupling factor 0.27 RS_RS13300 [glutamate--ammonia-ligase] adenylyltransferase low > 80
Acinetobacter baumannii LAC-4 0.46 RR41_RS12305 transcription-repair coupling factor 0.33 RR41_RS02960 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 55
Acinetobacter radioresistens SK82 0.45 MPMX26_01319 Transcription-repair-coupling factor 0.33 MPMX26_00444 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 36
Ralstonia solanacearum PSI07 0.45 RPSI07_RS16040 transcription-repair coupling factor 0.27 RPSI07_RS11865 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 81
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF4934 Transcription-repair coupling factor 0.21 GFF2533 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 90
Variovorax sp. OAS795 0.45 ABID97_RS17285 transcription-repair coupling factor 0.21 ABID97_RS02015 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 91
Variovorax sp. SCN45 0.45 GFF412 Transcription-repair coupling factor 0.22 GFF5443 Glutamine synthetase adenylyl-L-tyrosine phosphorylase (EC 2.7.7.89) / Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 127
Acidovorax sp. GW101-3H11 0.45 Ac3H11_328 Transcription-repair coupling factor 0.21 Ac3H11_1209 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 79
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS07845 transcription-repair coupling factor 0.27 RR42_RS05890 glutamine-synthetase adenylyltransferase low > 128
Dechlorosoma suillum PS 0.44 Dsui_2385 transcription-repair coupling factor Mfd 0.31 Dsui_3404 glutamine synthetase adenylyltransferase low > 51
Castellaniella sp019104865 MT123 0.43 ABCV34_RS08660 transcription-repair coupling factor 0.26 ABCV34_RS06200 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 48
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_0960 transcription-repair coupling factor (mfd) 0.15 Ga0059261_3494 Glutamine synthetase adenylyltransferase low > 68
Xanthobacter sp. DMC5 0.33 GFF946 Transcription-repair-coupling factor 0.19 GFF3129 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme — —
Magnetospirillum magneticum AMB-1 0.32 AMB_RS12390 transcription-repair coupling factor 0.20 AMB_RS13495 glutamine-synthetase adenylyltransferase low > 64
Azospirillum sp. SherDot2 0.32 MPMX19_00876 Transcription-repair-coupling factor 0.19 MPMX19_01990 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 112
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_01920 transcription-repair coupling factor Mfd 0.15 CCNA_02839 glutamate-ammonia-ligase adenylyltransferase low > 67
Caulobacter crescentus NA1000 0.32 CCNA_01920 transcription-repair coupling factor Mfd 0.15 CCNA_02839 glutamate-ammonia-ligase adenylyltransferase low > 66
Sinorhizobium meliloti 1021 0.32 SMc04450 transcription-repair coupling factor 0.18 SMc02368 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase low > 103
Dinoroseobacter shibae DFL-12 0.32 Dshi_1561 transcription-repair coupling factor (RefSeq) 0.15 Dshi_1775 (Glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 64
Sphingobium sp. HT1-2 0.32 GFF3606 Transcription-repair coupling factor 0.17 GFF2561 Glutamine synthetase adenylyl-L-tyrosine phosphorylase (EC 2.7.7.89) / Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 95
Bosea sp. OAE506 0.32 ABIE41_RS15825 transcription-repair coupling factor 0.16 ABIE41_RS21430 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase low > 77
Rhizobium sp. OAE497 0.31 ABIE40_RS09310 transcription-repair coupling factor 0.20 ABIE40_RS05710 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase low > 107

Not shown: 13 genomes with orthologs for CSW01_09445 only; 2 genomes with orthologs for CSW01_12345 only