Conservation of cofitness between CSW01_01010 and CSW01_11210 in Vibrio cholerae E7946 ATCC 55056

83 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01010 oligopeptidase A 1.0 CSW01_11210 flagellar hook protein FlgE 0.59 17
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.22 GFF3357 Flagellar hook protein FlgE low > 78
Enterobacter asburiae PDN3 0.72 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.22 EX28DRAFT_1856 flagellar hook-basal body protein low > 76
Escherichia coli ECRC62 0.72 BNILDI_03210 prlC oligopeptidase A 0.22 BNILDI_19350 flgE flagellar hook protein FlgE low > 75
Pantoea sp. MT58 0.72 IAI47_01345 oligopeptidase A 0.21 IAI47_12150 flagellar hook protein FlgE low > 76
Escherichia coli BL21 0.72 ECD_03347 oligopeptidase A 0.22 ECD_01072 flagellar hook protein low > 61
Escherichia coli ECOR27 0.72 NOLOHH_08350 prlC oligopeptidase A 0.22 NOLOHH_21190 flgE flagellar hook protein FlgE low > 76
Escherichia fergusonii Becca 0.72 EFB2_00317 Oligopeptidase A 0.22 EFB2_02898 Flagellar hook protein FlgE low > 86
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS17845 oligopeptidase A 0.20 PagCFBP13505_RS05185 flagellar hook protein FlgE low > 74
Escherichia coli Nissle 1917 0.72 ECOLIN_RS19985 oligopeptidase A 0.22 ECOLIN_RS06230 flagellar hook protein FlgE — —
Escherichia coli ECOR38 0.72 HEPCGN_15325 prlC oligopeptidase A 0.22 HEPCGN_23830 flgE flagellar hook protein FlgE low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00205 Oligopeptidase A 0.22 OHPLBJKB_02589 Flagellar hook protein FlgE low > 74
Escherichia coli BW25113 0.72 b3498 prlC oligopeptidase A (NCBI) 0.22 b1076 flgE flagellar hook protein E (NCBI) low > 76
Enterobacter sp. TBS_079 0.72 MPMX20_04397 Oligopeptidase A 0.23 MPMX20_01755 Flagellar hook protein FlgE low > 85
Escherichia coli ECRC101 0.72 MCAODC_06930 prlC oligopeptidase A 0.22 MCAODC_23020 flgE flagellar hook protein FlgE low > 88
Escherichia coli ECRC102 0.72 NIAGMN_14180 prlC oligopeptidase A 0.22 NIAGMN_24170 flgE flagellar hook protein FlgE low > 80
Escherichia coli ECRC98 0.72 JDDGAC_20045 prlC oligopeptidase A 0.22 JDDGAC_07320 flgE flagellar hook protein FlgE low > 87
Escherichia coli ECRC100 0.72 OKFHMN_16415 prlC oligopeptidase A 0.22 OKFHMN_03660 flgE flagellar hook protein FlgE low > 79
Escherichia coli ECRC99 0.72 KEDOAH_11730 prlC oligopeptidase A 0.22 KEDOAH_24095 flgE flagellar hook protein FlgE — —
Dickeya dadantii 3937 0.72 DDA3937_RS21265 oligopeptidase A 0.19 DDA3937_RS13465 flagellar hook protein FlgE low > 74
Serratia liquefaciens MT49 0.71 IAI46_24210 oligopeptidase A 0.20 IAI46_15945 flagellar hook protein FlgE low > 86
Erwinia tracheiphila HP pepo 2.2 0.71 IJEDHG_12590 prlC oligopeptidase A 0.19 IJEDHG_21060 flgE flagellar hook protein FlgE low > 61
Erwinia tracheiphila SCR3 0.71 LU632_RS19470 prlC oligopeptidase A 0.19 LU632_RS10410 flgE flagellar hook protein FlgE low > 74
Dickeya dianthicola ME23 0.71 DZA65_RS00035 oligopeptidase A 0.19 DZA65_RS13995 flagellar hook protein FlgE low > 75
Erwinia amylovora T8 0.71 OLJFJH_04530 Oligopeptidase A 0.20 OLJFJH_15610 flagellar hook protein FlgE low > 58
Pectobacterium carotovorum WPP14 0.71 HER17_RS21300 oligopeptidase A 0.19 HER17_RS08180 flagellar hook protein FlgE low > 75
Rahnella sp. WP5 0.70 EX31_RS05165 oligopeptidase A 0.20 EX31_RS11300 flagellar hook protein FlgE low > 89
Dickeya dianthicola 67-19 0.70 HGI48_RS00045 oligopeptidase A 0.18 HGI48_RS13510 flagellar hook protein FlgE low > 71
Shewanella loihica PV-4 0.68 Shew_3657 oligopeptidase A (RefSeq) 0.41 Shew_1348 flgE flagellar hook protein FlgE (RefSeq) low > 60
Shewanella amazonensis SB2B 0.67 Sama_3546 oligopeptidase A (RefSeq) 0.42 Sama_2315 flgE flagellar hook protein FlgE (RefSeq) low > 62
Shewanella sp. ANA-3 0.67 Shewana3_4051 oligopeptidase A (RefSeq) 0.42 Shewana3_1324 flgE flagellar hook protein FlgE (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.42 SO3247 flgE flagellar hook protein FlgE (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.66 MIT1002_03633 Oligopeptidase A 0.38 MIT1002_01042 Flagellar hook protein FlgE low > 70
Pseudomonas aeruginosa PA14 0.58 IKLFDK_25215 oligopeptidase A 0.23 IKLFDK_04960 flagellar hook protein FlgE low > 100
Pseudomonas stutzeri RCH2 0.57 Psest_4320 Zn-dependent oligopeptidases 0.21 Psest_4150 fagellar hook-basal body proteins low > 67
Pseudomonas segetis P6 0.57 MPMX49_00359 Oligopeptidase A 0.26 MPMX49_03164 Flagellar hook protein FlgE low > 75
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.27 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.27 Psyr_3478 Flagellar basal body rod protein:Protein of unknown function DUF1078:Flagellar basal body FlaE low > 86
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.23 PfGW456L13_2004 Flagellar hook protein FlgE low > 87
Pseudomonas sp. S08-1 0.56 OH686_12360 Oligopeptidase A 0.25 OH686_02960 Flagellar hook protein FlgE low > 80
Pseudomonas sp. SVBP6 0.56 COO64_RS02335 prlC oligopeptidase A 0.24 COO64_RS21385 flgE flagellar hook protein FlgE low > 93
Pseudomonas sp. DMC3 0.56 GFF663 Oligopeptidase A 0.23 GFF4847 Flagellar hook protein FlgE low > 89
Pseudomonas putida KT2440 0.56 PP_0096 oligopeptidase A 0.24 PP_4388 Flagellar hook protein FlgE low > 96
Pseudomonas simiae WCS417 0.56 PS417_00245 oligopeptidase A 0.22 PS417_21555 flagellar hook protein FlgE 0.44 41
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00240 oligopeptidase A 0.22 PFLU_RS23165 flagellar hook protein FlgE low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00240 oligopeptidase A 0.22 PFLU_RS23165 flagellar hook protein FlgE low > 109
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.25 Pf1N1B4_3475 Flagellar hook protein FlgE low > 87
Pseudomonas sp. RS175 0.56 PFR28_04699 Oligopeptidase A 0.24 PFR28_03251 Flagellar hook protein FlgE low > 88
Pseudomonas lactucae CFBP13502 0.56 GEMAOFIL_00254 Oligopeptidase A 0.23 GEMAOFIL_04454 Flagellar hook protein FlgE low > 93
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_10775 oligopeptidase A 0.23 AO353_02845 flagellar biosynthesis protein FlgE low > 101
Pseudomonas sp. BP01 0.56 JOY50_RS21245 prlC oligopeptidase A 0.24 JOY50_RS00780 flgE flagellar hook protein FlgE low > 84
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.22 Pf6N2E2_5697 Flagellar hook protein FlgE low > 103
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_11120 oligopeptidase A 0.23 AO356_18930 flagellar biosynthesis protein FlgE low > 104
Methylophilus sp. DMC18 0.52 GFF2262 Oligopeptidase A 0.24 GFF560 Flagellar hook protein FlgE low > 43
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_15380 dcp oligopeptidase A 0.24 OKGIIK_02665 flgE flagellar hook protein FlgE low > 53
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS07290 oligopeptidase A 0.24 HSERO_RS17660 flagellar hook protein FlgE low > 78
Dechlorosoma suillum PS 0.48 Dsui_0046 Zn-dependent oligopeptidase 0.23 Dsui_1735 flagellar hook-basal body proteins low > 51
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS05695 M3 family metallopeptidase 0.23 QEN71_RS39330 flagellar hook protein FlgE low > 153
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS14940 M3 family metallopeptidase 0.24 ABZR86_RS20090 flagellar hook protein FlgE low > 74
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS12875 oligopeptidase A 0.23 BPHYT_RS11995 flagellar hook protein FlgE low > 109
Rhodanobacter sp000427505 FW510-R12 0.48 LRK53_RS02390 M3 family metallopeptidase 0.25 LRK53_RS15160 flagellar hook protein FlgE low > 59
Ralstonia solanacearum GMI1000 0.47 RS_RS08035 oligopeptidase A 0.26 RS_RS18810 flagellar hook protein FlgE low > 80
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.17 RR42_RS35710 flagellar hook protein FlgE low > 128
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS13490 M3 family metallopeptidase 0.25 ABZR87_RS22275 flagellar hook protein FlgE low > 80
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS01690 oligopeptidase A 0.26 RALBFv3_RS21725 flagellar hook protein FlgE low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS15000 oligopeptidase A 0.26 UW163_RS17460 flagellar hook protein FlgE — —
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.26 Xcc-8004.2781.1 Flagellar hook protein FlgE low > 74
Rhodanobacter denitrificans FW104-10B01 0.47 LRK54_RS08615 M3 family metallopeptidase 0.24 LRK54_RS13420 flagellar hook protein FlgE low > 59
Rhodanobacter denitrificans MT42 0.47 LRK55_RS08380 M3 family metallopeptidase 0.25 LRK55_RS13160 flagellar hook protein FlgE low > 63
Ralstonia solanacearum PSI07 0.47 RPSI07_RS15795 oligopeptidase A 0.25 RPSI07_RS01405 flagellar hook protein FlgE low > 81
Variovorax sp. SCN45 0.44 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.23 GFF5718 Flagellar hook protein FlgE low > 127
Acidovorax sp. GW101-3H11 0.43 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.26 Ac3H11_1374 Flagellar hook protein FlgE low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.21 GFF1412 Flagellar hook protein FlgE low > 90
Castellaniella sp019104865 MT123 0.42 ABCV34_RS04180 M3 family metallopeptidase 0.22 ABCV34_RS05755 flagellar hook protein FlgE low > 48
Sinorhizobium meliloti 1021 0.27 SMc04403 peptidyl-dipeptidase A protein 0.13 SMc03047 flagellar hook protein FlgE low > 103
Agrobacterium fabrum C58 0.27 Atu2664 peptidyl-dipeptidase 0.11 Atu0574 flagellar hook protein 0.23 53
Rhizobium sp. OAE497 0.27 ABIE40_RS18135 M3 family metallopeptidase 0.12 ABIE40_RS23030 flagellar hook protein FlgE low > 107
Rhodopseudomonas palustris CGA009 0.26 TX73_004495 M3 family metallopeptidase 0.13 TX73_003345 flagellar hook protein FlgE low > 86
Phaeobacter inhibens DSM 17395 0.26 PGA1_c26590 peptidyl-dipeptidase Dcp 0.11 PGA1_c35570 flagellar hook protein FlgE low > 62
Bosea sp. OAE506 0.24 ABIE41_RS12985 M3 family metallopeptidase 0.12 ABIE41_RS05505 flagellar hook protein FlgE low > 77
Azospirillum brasilense Sp245 0.24 AZOBR_RS23485 peptidase M3 0.13 AZOBR_RS30080 flagellar hook protein low > 97
Dinoroseobacter shibae DFL-12 0.22 Dshi_2973 Peptidyl-dipeptidase Dcp (RefSeq) 0.12 Dshi_3379 protein of unknown function DUF1078 domain protein (RefSeq) low > 64
Sphingomonas koreensis DSMZ 15582 0.22 Ga0059261_2479 Zn-dependent oligopeptidases 0.27 Ga0059261_2092 flagellar hook-basal body protein low > 68
Lysobacter sp. OAE881 0.21 ABIE51_RS09155 M3 family metallopeptidase 0.26 ABIE51_RS16685 flagellar hook protein FlgE low > 62

Not shown: 23 genomes with orthologs for CSW01_01010 only; 5 genomes with orthologs for CSW01_11210 only