Conservation of cofitness between CSW01_12100 and CSW01_08685 in Vibrio cholerae E7946 ATCC 55056

88 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12100 carbamoyl-phosphate synthase large chain 1.0 CSW01_08685 glycogen synthase 0.75 6
Klebsiella michiganensis M5al 0.87 BWI76_RS04470 carbamoyl phosphate synthase large subunit 0.26 BWI76_RS26200 starch synthase low > 92
Klebsiella pneumoniae MKP103 0.87 KDGMDA_12710 carbamoyl-phosphate synthase large subunit 0.26 KDGMDA_07085 glycogen synthase GlgA low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF213 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.25 GFF578 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) low > 78
Enterobacter asburiae PDN3 0.87 EX28DRAFT_3638 carbamoyl-phosphate synthase, large subunit 0.26 EX28DRAFT_4118 glycogen/starch synthase, ADP-glucose type
Escherichia coli ECRC62 0.87 BNILDI_08330 carB carbamoyl-phosphate synthase large subunit 0.26 BNILDI_02825 glgA glycogen synthase GlgA low > 75
Escherichia coli BL21 0.87 ECD_00037 carbamoyl-phosphate synthase large subunit 0.26 ECD_03281 glycogen synthase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.87 OHPLBJKB_03624 Carbamoyl-phosphate synthase large chain 0.26 OHPLBJKB_00272 Glycogen synthase low > 74
Escherichia coli ECOR27 0.87 NOLOHH_03270 carB carbamoyl-phosphate synthase large subunit 0.26 NOLOHH_08690 glgA glycogen synthase GlgA low > 76
Shewanella loihica PV-4 0.87 Shew_2838 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.14 Shew_1172 starch synthase (RefSeq) low > 60
Escherichia fergusonii Becca 0.87 EFB2_04012 Carbamoyl-phosphate synthase large chain 0.26 EFB2_00390 Glycogen synthase low > 86
Escherichia coli ECOR38 0.87 HEPCGN_08925 carB carbamoyl-phosphate synthase large subunit 0.26 HEPCGN_15715 glgA glycogen synthase GlgA low > 88
Escherichia coli BW25113 0.87 b0033 carB carbamoyl-phosphate synthase large subunit (NCBI) 0.26 b3429 glgA glycogen synthase (NCBI) low > 76
Escherichia coli ECRC98 0.87 JDDGAC_14535 carB carbamoyl-phosphate synthase large subunit 0.26 JDDGAC_20530 glgA glycogen synthase GlgA 0.72 51
Shewanella amazonensis SB2B 0.87 Sama_2503 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.15 Sama_2449 starch synthase (RefSeq) low > 62
Escherichia coli ECRC101 0.87 MCAODC_01455 carB carbamoyl-phosphate synthase large subunit 0.26 MCAODC_07430 glgA glycogen synthase GlgA low > 87
Escherichia coli Nissle 1917 0.87 ECOLIN_RS00180 carbamoyl-phosphate synthase large subunit 0.26 ECOLIN_RS19625 glycogen synthase GlgA low > 55
Escherichia coli ECRC102 0.87 NIAGMN_08790 carB carbamoyl-phosphate synthase large subunit 0.26 NIAGMN_14670 glgA glycogen synthase GlgA low > 80
Escherichia coli ECRC100 0.87 OKFHMN_10940 carB carbamoyl-phosphate synthase large subunit 0.26 OKFHMN_16900 glgA glycogen synthase GlgA low > 79
Escherichia coli ECRC99 0.87 KEDOAH_17215 carB carbamoyl-phosphate synthase large subunit 0.26 KEDOAH_11240 glgA glycogen synthase GlgA
Enterobacter sp. TBS_079 0.87 MPMX20_00740 Carbamoyl-phosphate synthase large chain 0.26 MPMX20_04311 Glycogen synthase low > 85
Pectobacterium carotovorum WPP14 0.87 HER17_RS02900 carbamoyl-phosphate synthase large subunit 0.24 HER17_RS01500 glycogen synthase GlgA low > 75
Shewanella sp. ANA-3 0.86 Shewana3_0968 carB carbamoyl phosphate synthase large subunit (RefSeq) 0.15 Shewana3_2930 starch synthase catalytic subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.86 SO1142 carB carbamoyl-phosphate synthase, large subunit (NCBI ptt file) 0.14 SO1499 glgA glycogen synthase (NCBI ptt file) low > 76
Rahnella sp. WP5 0.86 EX31_RS03830 carbamoyl-phosphate synthase large subunit 0.26 EX31_RS05010 glycogen synthase GlgA low > 89
Dickeya dadantii 3937 0.86 DDA3937_RS18305 carbamoyl-phosphate synthase large subunit 0.24 DDA3937_RS19730 glycogen synthase GlgA low > 74
Dickeya dianthicola ME23 0.86 DZA65_RS19380 carbamoyl-phosphate synthase large subunit 0.24 DZA65_RS20915 glycogen synthase GlgA low > 75
Dickeya dianthicola 67-19 0.86 HGI48_RS18240 carbamoyl-phosphate synthase large subunit 0.24 HGI48_RS19840 glycogen synthase GlgA low > 71
Pantoea sp. MT58 0.86 IAI47_16115 carbamoyl-phosphate synthase large subunit 0.27 IAI47_01695 glycogen synthase GlgA low > 76
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS12880 carbamoyl-phosphate synthase large subunit 0.27 PagCFBP13505_RS18210 glycogen synthase GlgA low > 74
Serratia liquefaciens MT49 0.85 IAI46_03195 carbamoyl-phosphate synthase large subunit 0.23 IAI46_23925 glycogen synthase GlgA low > 87
Erwinia amylovora T8 0.84 OLJFJH_01395 carbamoyl-phosphate synthase large subunit 0.25 OLJFJH_04245 glycogen synthase GlgA low > 58
Alteromonas macleodii MIT1002 0.81 MIT1002_01467 Carbamoyl-phosphate synthase large chain 0.45 MIT1002_00235 Glycogen synthase low > 70
Pseudomonas lactucae CFBP13502 0.76 GEMAOFIL_04958 Carbamoyl-phosphate synthase large chain 0.21 GEMAOFIL_03185 Glycogen synthase
Pseudomonas aeruginosa PA14 0.76 IKLFDK_29815 carbamoyl-phosphate synthase large subunit 0.22 IKLFDK_10595 glycogen synthase GlgA low > 98
Pseudomonas aeruginosa PUPa3 0.76 DQ20_RS52500 carB;go_function=ATP carbamoyl-phosphate synthase large subunit 0.22 DQ20_RS39345 glgA;go_function=glycogen glycogen synthase GlgA low > 101
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1172 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.22 Pf1N1B4_4687 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas simiae WCS417 0.76 PS417_24040 carbamoyl phosphate synthase large subunit 0.21 PS417_14480 glycogen synthase
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_5099 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.22 PfGW456L13_3245 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas aeruginosa MRSN321 0.76 DY961_RS09535 carB;go_function=ATP carbamoyl-phosphate synthase large subunit 0.22 DY961_RS17085 glgA;go_function=glycogen glycogen synthase GlgA low > 100
Pseudomonas sp. DMC3 0.76 GFF4977 Carbamoyl-phosphate synthase large chain 0.22 GFF3482 Glycogen synthase
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_05630 carbamoyl phosphate synthase large subunit 0.21 AO353_23775 glycogen synthase
Pseudomonas sp. RS175 0.76 PFR28_00077 Carbamoyl-phosphate synthase large chain 0.22 PFR28_02145 Glycogen synthase
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit 0.21 PFLU_RS16410 glycogen synthase GlgA
Pseudomonas fluorescens SBW25 0.76 PFLU_RS25880 carbamoyl-phosphate synthase large subunit 0.21 PFLU_RS16410 glycogen synthase GlgA
Pseudomonas syringae pv. syringae B728a ΔmexB 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit 0.22 Psyr_2992 Starch (bacterial glycogen) synthase
Pseudomonas syringae pv. syringae B728a 0.76 Psyr_4191 carbamoyl-phosphate synthase large subunit 0.22 Psyr_2992 Starch (bacterial glycogen) synthase
Pseudomonas orientalis W4I3 0.76 QF045_RS26295 carbamoyl-phosphate synthase large subunit 0.22 QF045_RS15315 glycogen synthase GlgA
Pseudomonas sp. S08-1 0.75 OH686_17080 Carbamoyl-phosphate synthase large chain 0.23 OH686_01280 Glycogen synthase, ADP-glucose transglucosylase
Pseudomonas putida KT2440 0.75 PP_4723 Carbamoyl-phosphate synthase large chain 0.22 PP_4050 glycogen synthase low > 96
Pseudomonas fluorescens FW300-N2C3 0.75 AO356_07480 carbamoyl phosphate synthase large subunit 0.22 AO356_26025 glycogen synthase low > 104
Pseudomonas stutzeri RCH2 0.75 Psest_0968 carbamoyl-phosphate synthase, large subunit 0.22 Psest_2172 glycogen/starch synthases, ADP-glucose type
Pseudomonas fluorescens FW300-N2E2 0.75 Pf6N2E2_3364 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.22 Pf6N2E2_1078 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Pseudomonas sp. BP01 0.75 JOY50_RS26765 carB carbamoyl-phosphate synthase large subunit 0.22 JOY50_RS06710 glgA glycogen synthase GlgA
Pseudomonas sp. SVBP6 0.75 COO64_RS15240 carB carbamoyl-phosphate synthase large subunit 0.23 COO64_RS24815 glgA glycogen synthase GlgA low > 93
Marinobacter adhaerens HP15 0.75 HP15_3077 carbamoyl-phosphate synthase, large subunit 0.28 HP15_1713 glycogen/starch synthase, ADP-glucose type
Methylophilus sp. DMC18 0.73 GFF312 Carbamoyl-phosphate synthase large chain 0.27 GFF1174 Glycogen synthase
Xanthomonas campestris pv. campestris strain 8004 0.69 Xcc-8004.2912.1 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.23 Xcc-8004.537.1 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Ralstonia solanacearum PSI07 0.67 RPSI07_RS15255 carbamoyl-phosphate synthase large subunit 0.24 RPSI07_RS00900 glycogen synthase GlgA
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS06925 carbamoyl phosphate synthase large subunit 0.22 HSERO_RS12515 glycogen synthase
Ralstonia sp. UNC404CL21Col 0.67 ABZR87_RS14140 carbamoyl-phosphate synthase large subunit 0.25 ABZR87_RS17230 glycogen synthase GlgA
Ralstonia solanacearum IBSBF1503 0.67 RALBFv3_RS02190 carbamoyl-phosphate synthase large subunit 0.24 RALBFv3_RS22290 glycogen synthase GlgA
Ralstonia solanacearum UW163 0.67 UW163_RS15500 carbamoyl-phosphate synthase large subunit 0.24 UW163_RS22835 glycogen synthase GlgA
Paraburkholderia graminis OAS925 0.66 ABIE53_003004 carbamoyl-phosphate synthase large subunit 0.26 ABIE53_001742 starch synthase
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS14190 carbamoyl phosphate synthase large subunit 0.28 BPHYT_RS07615 glycogen synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_04403 carbamoyl-phosphate synthase large subunit 0.28 H281DRAFT_04861 starch synthase
Variovorax sp. OAS795 0.66 ABID97_RS17080 carbamoyl-phosphate synthase large subunit 0.25 ABID97_RS04535 glycogen synthase GlgA
Ralstonia solanacearum GMI1000 0.66 RS_RS07630 carbamoyl-phosphate synthase large chain 0.24 RS_RS18320 glycogen synthase
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS04780 carbamoyl-phosphate synthase large subunit 0.29 QEN71_RS23430 glycogen synthase GlgA
Variovorax sp. SCN45 0.66 GFF376 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.25 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Magnetospirillum magneticum AMB-1 0.61 AMB_RS03605 carbamoyl-phosphate synthase large subunit 0.25 AMB_RS10650 glycogen synthase
Rhodospirillum rubrum S1H 0.61 Rru_A2886 Carbamoyl-phosphate synthase, large subunit, glutamine-dependent (NCBI) 0.29 Rru_A2245 Glycogen/starch synthases, ADP-glucose type (NCBI)
Rhodopseudomonas palustris CGA009 0.60 TX73_021090 carbamoyl-phosphate synthase large subunit 0.24 TX73_001985 glycogen synthase GlgA
Azospirillum brasilense Sp245 0.59 AZOBR_RS12895 carbamoyl phosphate synthase large subunit 0.27 AZOBR_RS00855 glycogen synthase
Sphingobium sp. HT1-2 0.59 GFF2087 Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) 0.23 GFF2034 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Desulfovibrio vulgaris Hildenborough JW710 0.59 DVU0162 carB carbamoyl-phosphate synthase, large subunit (TIGR) 0.31 DVU2244 glgA glycogen synthase (TIGR)
Sinorhizobium meliloti 1021 0.59 SMc01215 carbamoyl phosphate synthase large subunit 0.25 SMc03924 glycogen synthase low > 103
Azospirillum sp. SherDot2 0.59 MPMX19_02299 Carbamoyl-phosphate synthase large chain 0.26 MPMX19_02225 Glycogen synthase
Agrobacterium fabrum C58 0.58 Atu2178 carbamoylphosphate synthase large subunit 0.26 Atu5285 glycogen synthase
Desulfovibrio vulgaris Miyazaki F 0.58 DvMF_2306 carbamoyl-phosphate synthase, large subunit (RefSeq) 0.30 DvMF_0841 glycogen/starch synthase, ADP-glucose type (RefSeq) low > 51
Bosea sp. OAE506 0.57 ABIE41_RS11910 carbamoyl-phosphate synthase large subunit 0.20 ABIE41_RS13060 glycogen synthase GlgA
Synechococcus elongatus PCC 7942 0.57 Synpcc7942_0711 carB carbamoyl phosphate synthase large subunit 0.23 Synpcc7942_2518 glgA glycogen synthase
Synechocystis sp000284455 PCC 6803 0.57 SGL_RS14530 carbamoyl-phosphate synthase large subunit 0.23 SGL_RS12525 glycogen synthase GlgA
Methanococcus maripaludis S2 0.48 MMP_RS05240 carbamoyl-phosphate synthase large subunit 0.11 MMP_RS06665 glycogen/starch synthase
Methanococcus maripaludis JJ 0.48 MMJJ_RS09140 carbamoyl-phosphate synthase large subunit 0.11 MMJJ_RS07685 glycogen/starch synthase
Fusobacterium nucleatum SB010 0.46 HUW76_08750 carbamoyl-phosphate synthase large subunit 0.25 HUW76_05855 glycogen synthase low > 35
Mucilaginibacter yixingensis YX-36 DSM 26809 0.44 ABZR88_RS20475 carbamoyl-phosphate synthase large subunit 0.23 ABZR88_RS18980 glycogen synthase
Pedobacter sp. GW460-11-11-14-LB5 0.43 CA265_RS20080 carbamoyl phosphate synthase large subunit 0.24 CA265_RS04140 glycogen synthase
Cellulophaga baltica 18 0.42 M666_RS18155 carbamoyl-phosphate synthase large subunit 0.15 M666_RS00870 glycogen/starch synthase low > 67

Not shown: 35 genomes with orthologs for CSW01_12100 only; 0 genomes with orthologs for CSW01_08685 only