| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12405 | | GTP diphosphokinase | 1.0 | CSW01_05930 | | tryptophan synthase subunit beta | 0.46 | 8 |
| Dickeya dianthicola 67-19 | 0.67 | HGI48_RS17070 | | GTP diphosphokinase | 0.85 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
| Dickeya dadantii 3937 | 0.67 | DDA3937_RS17015 | | GTP diphosphokinase | 0.85 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.67 | GFF4837 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | 0.83 | GFF2725 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 78 |
| Dickeya dianthicola ME23 | 0.67 | DZA65_RS18145 | | GTP diphosphokinase | 0.85 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.67 | KDGMDA_03335 | | GTP diphosphokinase | 0.83 | KDGMDA_19550 | | tryptophan synthase subunit beta | low | > 95 |
| Escherichia coli ECRC99 | 0.67 | KEDOAH_07880 | relA | GTP diphosphokinase | 0.82 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia coli BL21 | 0.67 | ECD_02629 | | (p)ppGpp synthetase I/GTP pyrophosphokinase | 0.82 | ECD_01235 | | tryptophan synthase, beta subunit | low | > 61 |
| Escherichia coli ECOR38 | 0.67 | HEPCGN_19500 | relA | GTP diphosphokinase | 0.82 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | 0.46 | 76 |
| Escherichia coli ECRC101 | 0.67 | MCAODC_10775 | relA | GTP diphosphokinase | 0.82 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | low | > 88 |
| Escherichia coli ECOR27 | 0.67 | NOLOHH_12125 | relA | GTP diphosphokinase | 0.82 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 76 |
| Escherichia coli ECRC98 | 0.67 | JDDGAC_23915 | relA | GTP diphosphokinase | 0.82 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | 0.35 | 85 |
| Escherichia coli ECRC62 | 0.67 | BNILDI_10630 | relA | GTP diphosphokinase | 0.82 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | 0.50 | 56 |
| Escherichia coli ECRC100 | 0.67 | OKFHMN_20250 | relA | GTP diphosphokinase | 0.82 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | low | > 79 |
| Escherichia coli Nissle 1917 | 0.67 | ECOLIN_RS15515 | | GTP diphosphokinase | 0.82 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 55 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.67 | OHPLBJKB_00947 | | GTP pyrophosphokinase | 0.82 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 74 |
| Escherichia coli BW25113 | 0.67 | b2784 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | 0.82 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | 0.49 | 53 |
| Escherichia coli ECRC102 | 0.67 | NIAGMN_18020 | relA | GTP diphosphokinase | 0.82 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
| Escherichia fergusonii Becca | 0.67 | EFB2_01133 | | GTP pyrophosphokinase | 0.82 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
| Klebsiella michiganensis M5al | 0.67 | BWI76_RS22805 | | GTP diphosphokinase | 0.83 | BWI76_RS11845 | | tryptophan synthase subunit beta | 0.57 | 20 |
| Enterobacter sp. TBS_079 | 0.66 | MPMX20_03653 | | GTP pyrophosphokinase | 0.83 | MPMX20_02513 | | Tryptophan synthase beta chain | 0.58 | 19 |
| Pantoea sp. MT58 | 0.66 | IAI47_04120 | | GTP diphosphokinase | 0.84 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
| Enterobacter asburiae PDN3 | 0.66 | EX28DRAFT_2864 | | (p)ppGpp synthetase, RelA/SpoT family | 0.82 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | low | > 76 |
| Erwinia tracheiphila HP pepo 2.2 | 0.66 | IJEDHG_17375 | relA | GTP diphosphokinase | 0.82 | IJEDHG_23490 | trpB | tryptophan synthase subunit beta | 0.83 | 36 |
| Erwinia tracheiphila SCR3 | 0.66 | LU632_RS06350 | relA | GTP diphosphokinase | 0.83 | LU632_RS12770 | trpB | tryptophan synthase subunit beta | low | > 74 |
| Erwinia amylovora T8 | 0.66 | OLJFJH_09245 | | GTP diphosphokinase | 0.84 | OLJFJH_13475 | | tryptophan synthase subunit beta | low | > 58 |
| Pantoea agglomerans CFBP13505 P0401 | 0.66 | PagCFBP13505_RS16850 | | GTP diphosphokinase | 0.84 | PagCFBP13505_RS07015 | | tryptophan synthase subunit beta | low | > 74 |
| Rahnella sp. WP5 | 0.66 | EX31_RS07955 | | GTP diphosphokinase | 0.82 | EX31_RS09975 | | tryptophan synthase subunit beta | 0.87 | 28 |
| Pectobacterium carotovorum WPP14 | 0.66 | HER17_RS04115 | | GTP diphosphokinase | 0.85 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
| Serratia liquefaciens MT49 | 0.66 | IAI46_03600 | | GTP diphosphokinase | 0.84 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 86 |
| Shewanella amazonensis SB2B | 0.57 | Sama_1033 | | GTP diphosphokinase (RefSeq) | 0.81 | Sama_2133 | | tryptophan synthase subunit beta (RefSeq) | 0.91 | 23 |
| Shewanella sp. ANA-3 | 0.56 | Shewana3_1111 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | 0.82 | Shewana3_1516 | | tryptophan synthase subunit beta (RefSeq) | 0.89 | 3 |
| Shewanella oneidensis MR-1 | 0.56 | SO3455 | relA | GTP pyrophosphokinase (NCBI ptt file) | 0.82 | SO3023 | trpB | tryptophan synthase, beta subunit (NCBI ptt file) | 0.91 | 34 |
| Shewanella loihica PV-4 | 0.56 | Shew_1202 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | 0.82 | Shew_2255 | | tryptophan synthase subunit beta (RefSeq) | 0.92 | 2 |
| Alteromonas macleodii MIT1002 | 0.53 | MIT1002_00794 | | GTP pyrophosphokinase | 0.74 | MIT1002_01426 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_2035 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.53 | PfGW456L13_566 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.45 | Psyr_3695 | | RelA/SpoT protein | 0.52 | Psyr_0034 | | tryptophan synthase, beta chain | 0.46 | 19 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.45 | Psyr_3695 | | RelA/SpoT protein | 0.52 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.45 | AO356_19060 | | (p)ppGpp synthetase | 0.53 | AO356_10915 | | tryptophan synthase subunit beta | 0.44 | 19 |
| Pseudomonas lactucae CFBP13502 | 0.45 | GEMAOFIL_04223 | | GTP pyrophosphokinase | 0.53 | GEMAOFIL_00242 | | Tryptophan synthase beta chain | low | > 93 |
| Pseudomonas sp. RS175 | 0.45 | PFR28_03223 | | GTP pyrophosphokinase | 0.54 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_5723 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.53 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.35 | 23 |
| Pseudomonas fluorescens FW300-N2E3 | 0.45 | AO353_02710 | | (p)ppGpp synthetase | 0.53 | AO353_10710 | | tryptophan synthase subunit beta | 0.48 | 52 |
| Pseudomonas fluorescens SBW25-INTG | 0.45 | PFLU_RS22095 | | GTP diphosphokinase | 0.54 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.45 | PFLU_RS22095 | | GTP diphosphokinase | 0.54 | PFLU_RS00180 | | tryptophan synthase subunit beta | low | > 109 |
| Pseudomonas simiae WCS417 | 0.45 | PS417_20150 | | (p)ppGpp synthetase | 0.54 | PS417_00185 | | tryptophan synthase subunit beta | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_3508 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.54 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.45 | GFF4818 | | GTP pyrophosphokinase | 0.53 | GFF676 | | Tryptophan synthase beta chain | low | > 89 |
| Pseudomonas putida KT2440 | 0.45 | PP_1656 | | ATP:GTP 3'-pyrophosphotransferase | 0.54 | PP_0083 | | tryptophan synthase beta chain | 0.50 | 8 |
| Pseudomonas sp. BP01 | 0.45 | JOY50_RS23910 | relA | GTP diphosphokinase | 0.54 | JOY50_RS21310 | trpB | tryptophan synthase subunit beta | low | > 84 |
| Pseudomonas sp. SVBP6 | 0.45 | COO64_RS07325 | relA | GTP diphosphokinase | 0.52 | COO64_RS02275 | trpB | tryptophan synthase subunit beta | low | > 93 |
| Pseudomonas aeruginosa PA14 | 0.45 | IKLFDK_04200 | | GTP diphosphokinase | 0.53 | IKLFDK_25375 | | tryptophan synthase subunit beta | low | > 100 |
| Pseudomonas sp. S08-1 | 0.45 | OH686_18960 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I | 0.53 | OH686_12425 | | tryptophan synthase, beta subunit | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.44 | Psest_1640 | | (p)ppGpp synthetase, RelA/SpoT family | 0.53 | Psest_0063 | | tryptophan synthase, beta subunit | 0.31 | 62 |
| Pseudomonas segetis P6 | 0.44 | MPMX49_01654 | | GTP pyrophosphokinase | 0.53 | MPMX49_00373 | | Tryptophan synthase beta chain | — | — |
| Marinobacter adhaerens HP15 | 0.43 | HP15_791 | | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA | 0.55 | HP15_1827 | | tryptophan synthase, beta subunit | — | — |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_2277 | | (p)ppGpp synthetase, RelA/SpoT family | 0.63 | B158DRAFT_2429 | | tryptophan synthase, beta subunit | low | > 40 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.39 | Xcc-8004.1489.1 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.51 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 74 |
| Dyella japonica UNC79MFTsu3.2 | 0.39 | ABZR86_RS19725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.52 | ABZR86_RS08000 | | tryptophan synthase subunit beta | 0.47 | 31 |
| Rhodanobacter sp. FW510-T8 | 0.39 | OKGIIK_02170 | relA | GTP diphosphokinase | 0.52 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | low | > 52 |
| Rhodanobacter denitrificans FW104-10B01 | 0.38 | LRK54_RS12725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.51 | LRK54_RS01685 | | tryptophan synthase subunit beta | low | > 59 |
| Rhodanobacter denitrificans MT42 | 0.38 | LRK55_RS12430 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.51 | LRK55_RS01465 | | tryptophan synthase subunit beta | 0.90 | 4 |
| Ralstonia solanacearum GMI1000 | 0.38 | RS_RS07930 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | RS_RS09965 | | tryptophan synthase subunit beta | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.38 | ABZR87_RS13745 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.38 | RPSI07_RS15685 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | RPSI07_RS14730 | | tryptophan synthase subunit beta | low | > 81 |
| Rhodanobacter sp000427505 FW510-R12 | 0.38 | LRK53_RS15870 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.51 | LRK53_RS08350 | | tryptophan synthase subunit beta | low | > 59 |
| Dechlorosoma suillum PS | 0.38 | Dsui_2816 | | (p)ppGpp synthetase, RelA/SpoT family | 0.53 | Dsui_3192 | | tryptophan synthase, beta subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.38 | RALBFv3_RS01805 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
| Ralstonia solanacearum UW163 | 0.38 | UW163_RS15115 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.37 | QEN71_RS05265 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.54 | QEN71_RS17645 | | tryptophan synthase subunit beta | low | > 153 |
| Methylophilus sp. DMC18 | 0.37 | GFF2658 | | GTP pyrophosphokinase | 0.54 | GFF656 | | Tryptophan synthase beta chain | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.37 | RR42_RS06585 | | GTP pyrophosphokinase | 0.55 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS05170 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.52 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
| Paraburkholderia graminis OAS925 | 0.35 | ABIE53_002905 | | GTP pyrophosphokinase | 0.53 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04499 | | GTP pyrophosphokinase | 0.53 | H281DRAFT_06067 | | tryptophan synthase, beta chain | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.35 | HSERO_RS09855 | | GTP pyrophosphokinase | 0.50 | HSERO_RS16475 | | tryptophan synthase subunit alpha | low | > 78 |
| Acinetobacter baumannii LAC-4 | 0.35 | RR41_RS16080 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.53 | RR41_RS03115 | | tryptophan synthase subunit beta | low | > 55 |
| Acinetobacter radioresistens SK82 | 0.35 | MPMX26_00539 | | GTP pyrophosphokinase | 0.52 | MPMX26_02617 | | Tryptophan synthase beta chain | low | > 36 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS13655 | | GTP pyrophosphokinase | 0.54 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | 0.17 | 103 |
| Acidovorax sp. GW101-3H11 | 0.34 | Ac3H11_362 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.53 | Ac3H11_1534 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.47 | 33 |
| Castellaniella sp019104865 MT123 | 0.34 | ABCV34_RS08440 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.51 | ABCV34_RS08435 | | tryptophan synthase subunit beta | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.34 | GFF4925 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.53 | GFF3355 | | Tryptophan synthase beta chain (EC 4.2.1.20) | 0.63 | 42 |
| Variovorax sp. SCN45 | 0.32 | GFF403 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.53 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.25 | HMPREF1058_RS17885 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.48 | HMPREF1058_RS07170 | | tryptophan synthase subunit beta | 0.55 | 37 |
| Phocaeicola dorei CL03T12C01 | 0.25 | ABI39_RS14150 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.48 | ABI39_RS21045 | | tryptophan synthase subunit beta | low | > 72 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.24 | BT0700 | | GTP pyrophosphokinase (NCBI ptt file) | 0.48 | BT0533 | | tryptophan synthase beta chain (NCBI ptt file) | low | > 81 |
| Bacteroides ovatus ATCC 8483 | 0.24 | BACOVA_02404 | | RelA/SpoT family protein | 0.47 | BACOVA_03779 | | tryptophan synthase, beta subunit | low | > 96 |
| Bacteroides stercoris CC31F | 0.24 | HMPREF1181_RS16240 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.47 | HMPREF1181_RS15320 | | tryptophan synthase subunit beta | low | > 56 |
Not shown: 0 genomes with orthologs for CSW01_12405 only; 31 genomes with orthologs for CSW01_05930 only