Conservation of cofitness between CSW01_01115 and CSW01_02850 in Vibrio cholerae E7946 ATCC 55056

93 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01115 ribonuclease PH 1.0 CSW01_02850 sulfate ABC transporter substrate-binding protein 0.40 13
Dickeya dianthicola 67-19 0.78 HGI48_RS00675 ribonuclease PH 0.42 HGI48_RS15990 sulfate ABC transporter substrate-binding protein low > 71
Dickeya dianthicola ME23 0.78 DZA65_RS00730 ribonuclease PH 0.42 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Dickeya dadantii 3937 0.77 DDA3937_RS20540 ribonuclease PH 0.43 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein 0.65 37
Pectobacterium carotovorum WPP14 0.76 HER17_RS20855 ribonuclease PH 0.59 HER17_RS17225 sulfate ABC transporter substrate-binding protein low > 75
Erwinia amylovora T8 0.75 OLJFJH_05765 ribonuclease PH 0.58 OLJFJH_10815 sulfate ABC transporter substrate-binding protein 0.37 31
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.58 GFF2059 Sulfate and thiosulfate binding protein CysP low > 78
Enterobacter sp. TBS_079 0.74 MPMX20_00092 Ribonuclease PH 0.58 MPMX20_03317 Thiosulfate-binding protein low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_3893 ribonuclease PH 0.58 EX28DRAFT_0205 sulfate/thiosulfate-binding protein low > 76
Erwinia tracheiphila SCR3 0.73 LU632_RS22020 rph ribonuclease PH 0.56 LU632_RS06695 cysP thiosulfate ABC transporter substrate-binding protein CysP low > 73
Erwinia tracheiphila HP pepo 2.2 0.73 IJEDHG_07755 rph ribonuclease PH 0.56 IJEDHG_16820 sulfate ABC transporter substrate-binding protein low > 61
Escherichia coli ECRC102 0.73 NIAGMN_13350 rph ribonuclease PH 0.58 NIAGMN_19920 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 80
Escherichia fergusonii Becca 0.73 EFB2_00170 Ribonuclease PH 0.58 EFB2_01452 Thiosulfate-binding protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00059 Ribonuclease PH 0.58 OHPLBJKB_01298 Thiosulfate-binding protein low > 74
Escherichia coli ECOR27 0.73 NOLOHH_07470 rph ribonuclease PH 0.58 NOLOHH_13830 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 76
Escherichia coli Nissle 1917 0.73 ECOLIN_RS20755 ribonuclease PH 0.58 ECOLIN_RS13920 thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 55
Pantoea sp. MT58 0.73 IAI47_00595 ribonuclease PH 0.58 IAI47_05385 sulfate ABC transporter substrate-binding protein low > 76
Escherichia coli ECRC62 0.73 BNILDI_04045 rph ribonuclease PH 0.58 BNILDI_12695 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 75
Escherichia coli ECOR38 0.73 HEPCGN_14410 rph ribonuclease PH 0.58 HEPCGN_21325 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 88
Klebsiella michiganensis M5al 0.73 BWI76_RS27390 ribonuclease PH 0.58 BWI76_RS20705 thiosulfate transporter subunit low > 92
Escherichia coli ECRC99 0.73 KEDOAH_12555 rph ribonuclease PH 0.58 KEDOAH_06070 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP — —
Escherichia coli ECRC100 0.73 OKFHMN_15590 rph ribonuclease PH 0.58 OKFHMN_22150 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 79
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS18750 ribonuclease PH 0.58 PagCFBP13505_RS19930 sulfate ABC transporter substrate-binding protein low > 74
Serratia liquefaciens MT49 0.73 IAI46_24850 ribonuclease PH 0.60 IAI46_18510 sulfate ABC transporter substrate-binding protein low > 87
Escherichia coli ECRC98 0.73 JDDGAC_19215 rph ribonuclease PH 0.58 JDDGAC_26100 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 87
Escherichia coli ECRC101 0.73 MCAODC_06100 rph ribonuclease PH 0.58 MCAODC_12680 cysP thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 87
Escherichia coli BL21 0.73 ECD_03500 ribonuclease PH 0.58 ECD_02325 thiosulfate-binding protein low > 61
Klebsiella pneumoniae MKP103 0.73 KDGMDA_08055 ribonuclease PH 0.58 KDGMDA_27545 thiosulfate/sulfate ABC transporter substrate-binding protein CysP low > 95
Rahnella sp. WP5 0.72 EX31_RS14505 ribonuclease PH 0.59 EX31_RS20225 sulfate ABC transporter substrate-binding protein low > 89
Shewanella sp. ANA-3 0.71 Shewana3_3777 RNAse PH (RefSeq) 0.82 Shewana3_3189 sulfate ABC transporter, periplasmic sulfate-binding protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.70 SO4256 rph ribonuclease PH (NCBI ptt file) 0.81 SO3599 cysP sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) low > 76
Escherichia coli BW25113 0.70 b3643 rph ribonuclease PH (NCBI) 0.58 b2425 cysP thiosulfate transporter subunit (NCBI) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.66 GFF3254 Ribonuclease PH (EC 2.7.7.56) 0.43 GFF5027 Sulfate and thiosulfate binding protein CysP low > 90
Acinetobacter baumannii LAC-4 0.65 RR41_RS18695 ribonuclease PH 0.43 RR41_RS04795 sulfate ABC transporter substrate-binding protein — —
Pseudomonas aeruginosa PUPa3 0.65 DQ20_RS49565 rph;go_function=tRNA-specific ribonuclease PH 0.45 DQ20_RS37930 sulfate ABC transporter substrate-binding protein low > 101
Pseudomonas aeruginosa MRSN321 0.65 DY961_RS12560 rph;go_function=tRNA-specific ribonuclease PH 0.45 DY961_RS21360 sulfate ABC transporter substrate-binding protein low > 100
Pseudomonas aeruginosa PA14 0.65 IKLFDK_26785 ribonuclease PH 0.45 IKLFDK_24045 sulfate ABC transporter substrate-binding protein low > 98
Pseudomonas sp. SVBP6 0.64 COO64_RS01510 rph ribonuclease PH 0.43 COO64_RS12510 sulfate ABC transporter substrate-binding protein low > 93
Pseudomonas sp. S08-1 0.64 OH686_13570 ribonuclease PH 0.43 OH686_11670 Sulfate and thiosulfate binding protein CysP low > 80
Pseudomonas sp. BP01 0.64 JOY50_RS09025 rph ribonuclease PH 0.45 JOY50_RS00385 sulfate ABC transporter substrate-binding protein low > 84
Dechlorosoma suillum PS 0.64 Dsui_0494 ribonuclease PH 0.45 Dsui_0261 sulfate/thiosulfate-binding protein low > 51
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_0213 RNAse PH 0.43 Psyr_3383 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_0213 RNAse PH 0.43 Psyr_3383 extracellular solute-binding protein, family 1 low > 86
Pseudomonas fluorescens FW300-N1B4 0.64 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.44 Pf1N1B4_3654 Sulfate and thiosulfate binding protein CysP low > 87
Pseudomonas fluorescens FW300-N2E3 0.64 AO353_09260 ribonuclease PH 0.42 AO353_01955 thiosulfate transporter subunit low > 101
Acinetobacter radioresistens SK82 0.64 MPMX26_00040 Ribonuclease PH 0.43 MPMX26_02825 Sulfate-binding protein low > 36
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.44 Pf6N2E2_5832 Sulfate and thiosulfate binding protein CysP low > 103
Pseudomonas segetis P6 0.64 ACVTMO_RS00150 rph ribonuclease PH 0.49 ACVTMO_RS05725 cysP thiosulfate ABC transporter substrate-binding protein CysP low > 75
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_12500 ribonuclease PH 0.44 AO356_19585 thiosulfate transporter subunit low > 104
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.44 PfGW456L13_4302 Sulfate and thiosulfate binding protein CysP low > 87
Marinobacter adhaerens HP15 0.64 HP15_300 ribonuclease PH 0.62 HP15_1344 thiosulfate transporter subunit low > 73
Pseudomonas putida KT2440 0.64 PP_5294 Ribonuclease PH 0.45 PP_4305 sulfate ABC transporter low > 96
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_00030 Ribonuclease PH 0.43 GEMAOFIL_00409 Sulfate-binding protein low > 96
Pseudomonas orientalis W4I3 0.63 QF045_RS02165 ribonuclease PH 0.43 QF045_RS11475 sulfate ABC transporter substrate-binding protein low > 93
Pseudomonas sp. RS175 0.63 PFR28_04420 Ribonuclease PH 0.44 PFR28_03117 Sulfate-binding protein low > 88
Pseudomonas stutzeri RCH2 0.63 Psest_3813 ribonuclease PH 0.46 Psest_4060 sulfate/thiosulfate-binding protein low > 67
Variovorax sp. SCN45 0.63 GFF2381 Ribonuclease PH (EC 2.7.7.56) 0.41 GFF1247 Sulfate and thiosulfate binding protein CysP low > 127
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS29490 ribonuclease PH 0.43 PFLU_RS08835 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25 0.63 PFLU_RS29490 ribonuclease PH 0.43 PFLU_RS08835 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas sp. DMC3 0.63 GFF415 Ribonuclease PH 0.42 GFF2496 Sulfate-binding protein low > 89
Pseudomonas simiae WCS417 0.63 PS417_27810 ribonuclease PH 0.43 PS417_08775 thiosulfate transporter subunit low > 88
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS11900 ribonuclease PH 0.40 ABZR86_RS02880 sulfate ABC transporter substrate-binding protein low > 74
Variovorax sp. OAS795 0.63 ABID97_RS23640 ribonuclease PH 0.42 ABID97_RS15465 sulfate ABC transporter substrate-binding protein low > 91
Methylophilus sp. DMC18 0.62 GFF2136 Ribonuclease PH 0.46 GFF391 Sulfate-binding protein low > 43
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.1221.1 Ribonuclease PH (EC 2.7.7.56) 0.40 Xcc-8004.4087.1 Sulfate and thiosulfate binding protein CysP low > 74
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS03645 ribonuclease PH 0.48 QEN71_RS01080 sulfate ABC transporter substrate-binding protein low > 153
Azospirillum brasilense Sp245 0.61 AZOBR_RS02205 ribonuclease PH 0.44 AZOBR_RS19265 sulfate transporter subunit low > 97
Bosea sp. OAE506 0.61 ABIE41_RS03295 ribonuclease PH 0.41 ABIE41_RS15360 sulfate ABC transporter substrate-binding protein low > 77
Acidovorax sp. GW101-3H11 0.60 Ac3H11_3670 Ribonuclease PH (EC 2.7.7.56) 0.43 Ac3H11_581 Sulfate and thiosulfate binding protein CysP low > 79
Paraburkholderia graminis OAS925 0.60 ABIE53_003234 ribonuclease PH 0.47 ABIE53_000576 sulfate transport system substrate-binding protein low > 113
Rhodopseudomonas palustris CGA009 0.60 TX73_001710 ribonuclease PH 0.43 TX73_003875 sulfate ABC transporter substrate-binding protein low > 86
Burkholderia phytofirmans PsJN 0.60 BPHYT_RS15325 ribonuclease PH 0.47 BPHYT_RS02145 sulfate ABC transporter substrate-binding protein low > 109
Sinorhizobium meliloti 1021 0.60 SMc01144 ribonuclease PH 0.39 SM_b21133 sulfate ABC transporter substrate-binding protein low > 103
Paraburkholderia bryophila 376MFSha3.1 0.60 H281DRAFT_04008 RNAse PH 0.46 H281DRAFT_02098 sulfate transport system substrate-binding protein low > 103
Rhodanobacter sp. FW510-T8 0.59 OKGIIK_12150 rph ribonuclease PH 0.40 OKGIIK_10935 ABC transporter permease — —
Rhodanobacter sp000427505 FW510-R12 0.59 LRK53_RS16795 ribonuclease PH 0.40 LRK53_RS12180 sulfate ABC transporter substrate-binding protein — —
Azospirillum sp. SherDot2 0.59 MPMX19_02576 Ribonuclease PH 0.43 MPMX19_04166 Sulfate-binding protein low > 112
Lysobacter sp. OAE881 0.59 ABIE51_RS17285 ribonuclease PH 0.42 ABIE51_RS01855 sulfate ABC transporter substrate-binding protein low > 62
Cupriavidus basilensis FW507-4G11 0.59 RR42_RS04890 ribonuclease PH 0.41 RR42_RS12295 ABC transporter permease low > 128
Agrobacterium fabrum C58 0.59 Atu0327 ribonuclease PH 0.49 Atu3504 sulfate ABC transporter substrate-binding protein — —
Herbaspirillum seropedicae SmR1 0.59 HSERO_RS10655 ribonuclease PH 0.47 HSERO_RS08185 sulfate transporter subunit low > 78
Rhizobium sp. OAE497 0.59 ABIE40_RS01640 ribonuclease PH 0.42 ABIE40_RS24590 sulfate ABC transporter substrate-binding protein low > 107
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15255 ribonuclease PH 0.43 ABZR87_RS11490 sulfate ABC transporter substrate-binding protein low > 80
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13840 ribonuclease PH 0.42 RPSI07_RS17445 sulfate ABC transporter substrate-binding protein — —
Ralstonia solanacearum GMI1000 0.58 RS_RS10830 ribonuclease PH 0.43 RS_RS06700 sulfate ABC transporter substrate-binding protein — —
Rhodospirillum rubrum S1H 0.57 Rru_A3641 Ribonuclease PH (NCBI) 0.43 Rru_A3400 Thiosulphate-binding protein (NCBI) — —
Ralstonia solanacearum UW163 0.57 UW163_RS10375 ribonuclease PH 0.42 UW163_RS13365 sulfate ABC transporter substrate-binding protein — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS03345 ribonuclease PH 0.42 RALBFv3_RS00035 sulfate ABC transporter substrate-binding protein low > 76
Castellaniella sp019104865 MT123 0.57 ABCV34_RS03515 ribonuclease PH 0.41 ABCV34_RS03935 sulfate ABC transporter substrate-binding protein low > 48
Xanthobacter sp. DMC5 0.57 GFF1893 Ribonuclease PH 0.46 GFF1745 Thiosulfate-binding protein — —
Magnetospirillum magneticum AMB-1 0.55 AMB_RS22760 ribonuclease PH 0.51 AMB_RS18050 sulfate ABC transporter substrate-binding protein low > 64
Caulobacter crescentus NA1000 0.54 CCNA_00151 ribonuclease PH 0.43 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 66
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00151 ribonuclease PH 0.43 CCNA_00288 ABC-type sulfate transport system, periplasmic component low > 67
Synechococcus elongatus PCC 7942 0.53 Synpcc7942_1073 rph ribonuclease PH 0.31 Synpcc7942_1686 sbpA Thiosulphate-binding protein low > 38

Not shown: 13 genomes with orthologs for CSW01_01115 only; 1 genomes with orthologs for CSW01_02850 only