| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_12610 | | 3-isopropylmalate dehydratase small subunit | 1.0 | CSW01_00700 | | DNA starvation/stationary phase protection protein | 0.70 | 16 |
| Serratia liquefaciens MT49 | 0.78 | IAI46_03340 | | 3-isopropylmalate dehydratase small subunit | 0.67 | IAI46_14135 | | DNA starvation/stationary phase protection protein | low | > 87 |
| Dickeya dadantii 3937 | 0.78 | DDA3937_RS18130 | | 3-isopropylmalate dehydratase small subunit | 0.66 | DDA3937_RS06890 | | DNA starvation/stationary phase protection protein | low | > 74 |
| Dickeya dianthicola ME23 | 0.76 | DZA65_RS19215 | | 3-isopropylmalate dehydratase small subunit | 0.66 | DZA65_RS07220 | | DNA starvation/stationary phase protection protein | low | > 75 |
| Dickeya dianthicola 67-19 | 0.76 | HGI48_RS18070 | | 3-isopropylmalate dehydratase small subunit | 0.66 | HGI48_RS06880 | | DNA starvation/stationary phase protection protein | low | > 71 |
| Shewanella oneidensis MR-1 | 0.65 | SO4233 | leuD | 3-isopropylmalate dehydratase, small subunit (NCBI ptt file) | 0.31 | SO1158 | | Dps family protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.64 | Shewana3_3758 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.31 | Shewana3_0985 | | Ferritin, Dps family protein (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.63 | Sama_0338 | leuD | isopropylmalate isomerase small subunit (RefSeq) | 0.31 | Sama_2598 | | Dps family protein (RefSeq) | low | > 62 |
| Pseudomonas orientalis W4I3 | 0.61 | QF045_RS20735 | | 3-isopropylmalate dehydratase small subunit | 0.28 | QF045_RS24645 | | Dps family protein | low | > 93 |
| Pseudomonas simiae WCS417 | 0.61 | PS417_18595 | | 3-isopropylmalate dehydratase | 0.28 | PS417_22480 | | ferritin | low | > 88 |
| Pseudomonas stutzeri RCH2 | 0.61 | Psest_2590 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psest_1492 | | DNA-binding ferritin-like protein (oxidative damage protectant) | low | > 67 |
| Pseudomonas sp. SVBP6 | 0.60 | COO64_RS05660 | leuD | 3-isopropylmalate dehydratase small subunit | 0.28 | COO64_RS20065 | | Dps family protein | low | > 93 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.28 | PFLU_RS24120 | | DNA starvation/stationary phase protection protein | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS20575 | | 3-isopropylmalate dehydratase small subunit | 0.28 | PFLU_RS24120 | | DNA starvation/stationary phase protection protein | low | > 109 |
| Pseudomonas lactucae CFBP13502 | 0.60 | GEMAOFIL_03947 | | 3-isopropylmalate dehydratase small subunit | 0.28 | GEMAOFIL_04648 | | hypothetical protein | low | > 96 |
| Pseudomonas putida KT2440 | 0.60 | PP_1986 | | 3-isopropylmalate dehydratase small subunit | 0.28 | PP_1210 | | DNA-binding stress protein | low | > 96 |
| Pseudomonas sp. S08-1 | 0.60 | OH686_04475 | | 3-isopropylmalate dehydratase small subunit | 0.28 | OH686_19105 | | DNA protection during starvation protein | low | > 80 |
| Pseudomonas segetis P6 | 0.60 | MPMX49_03073 | | 3-isopropylmalate dehydratase small subunit 1 | 0.27 | MPMX49_01680 | | DNA protection during starvation protein 2 | low | > 75 |
| Pseudomonas sp. BP01 | 0.60 | JOY50_RS16625 | leuD | 3-isopropylmalate dehydratase small subunit | 0.29 | JOY50_RS01850 | | Dps family protein | low | > 84 |
| Pseudomonas sp. DMC3 | 0.59 | GFF786 | | 3-isopropylmalate dehydratase small subunit 1 | 0.29 | GFF5191 | | DNA protection during starvation protein 2 | low | > 89 |
| Pseudomonas aeruginosa PA14 | 0.59 | IKLFDK_15875 | | 3-isopropylmalate dehydratase small subunit | 0.27 | IKLFDK_04350 | | DNA starvation/stationary phase protection protein | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.59 | DQ20_RS34230 | leuD;go_component=3-isopropylmalate | 3-isopropylmalate dehydratase small subunit | 0.27 | DQ20_RS45170 | | Dps family protein | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.59 | DY961_RS01325 | leuD;go_component=3-isopropylmalate | 3-isopropylmalate dehydratase small subunit | 0.27 | DY961_RS07620 | | Dps family protein | low | > 100 |
| Pseudomonas fluorescens FW300-N2E2 | 0.59 | Pf6N2E2_64 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.28 | Pf6N2E2_5529 | | Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) | low | > 103 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_02823 | | 3-isopropylmalate dehydratase small subunit 1 | 0.29 | PFR28_03419 | | DNA protection during starvation protein 2 | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.58 | MPMX26_00346 | | 3-isopropylmalate dehydratase small subunit 1 | 0.24 | MPMX26_01495 | | DNA protection during starvation protein 2 | low | > 36 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_21405 | | 3-isopropylmalate dehydratase | 0.28 | AO356_17990 | | ferritin | low | > 104 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.58 | Xcc-8004.1050.1 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.26 | Xcc-8004.1478.1 | | Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) | low | > 74 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_1833 | | isopropylmalate isomerase small subunit | 0.63 | HP15_3253 | | ferritin-like DNA-binding protein | low | > 73 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.58 | H281DRAFT_06073 | | 3-isopropylmalate dehydratase, small subunit | 0.27 | H281DRAFT_04677 | | starvation-inducible DNA-binding protein | low | > 103 |
| Alteromonas macleodii MIT1002 | 0.57 | MIT1002_00946 | | 3-isopropylmalate dehydratase small subunit 1 | 0.31 | MIT1002_00525 | | DNA protection during starvation protein 2 | low | > 70 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psyr_1404 | | Ferritin and Dps | low | > 86 |
| Burkholderia phytofirmans PsJN | 0.57 | BPHYT_RS33905 | | 3-isopropylmalate dehydratase small subunit | 0.27 | BPHYT_RS03480 | | ferritin | low | > 109 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_1984 | | 3-isopropylmalate dehydratase, small subunit | 0.29 | Psyr_1404 | | Ferritin and Dps | low | > 86 |
| Ralstonia solanacearum PSI07 | 0.57 | RPSI07_RS14700 | | 3-isopropylmalate dehydratase small subunit | 0.24 | RPSI07_RS11705 | | DNA starvation/stationary phase protection protein | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS17615 | | 3-isopropylmalate dehydratase small subunit | 0.26 | QEN71_RS26610 | | Dps family protein | low | > 153 |
| Ralstonia solanacearum IBSBF1503 | 0.57 | RALBFv3_RS02615 | | 3-isopropylmalate dehydratase small subunit | 0.24 | RALBFv3_RS05595 | | DNA starvation/stationary phase protection protein | low | > 76 |
| Ralstonia solanacearum UW163 | 0.57 | UW163_RS11110 | | 3-isopropylmalate dehydratase small subunit | 0.24 | UW163_RS08030 | | DNA starvation/stationary phase protection protein | — | — |
| Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS24180 | | 3-isopropylmalate dehydratase | 0.29 | RR42_RS17370 | | ferritin | — | — |
| Paraburkholderia graminis OAS925 | 0.56 | ABIE53_004803 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit | 0.27 | ABIE53_000838 | | starvation-inducible DNA-binding protein | low | > 113 |
| Ralstonia sp. UNC404CL21Col | 0.56 | ABZR87_RS14535 | | 3-isopropylmalate dehydratase small subunit | 0.25 | ABZR87_RS01245 | | Dps family protein | low | > 80 |
| Ralstonia solanacearum GMI1000 | 0.56 | RS_RS09995 | | 3-isopropylmalate dehydratase small subunit | 0.24 | RS_RS13455 | | DNA starvation/stationary phase protection protein | — | — |
| Kangiella aquimarina DSM 16071 | 0.56 | B158DRAFT_1320 | | 3-isopropylmalate dehydratase, small subunit | 0.31 | B158DRAFT_0476 | | DNA-binding ferritin-like protein (oxidative damage protectant) | low | > 40 |
| Herbaspirillum seropedicae SmR1 | 0.55 | HSERO_RS16505 | | 3-isopropylmalate dehydratase small subunit | 0.26 | HSERO_RS02145 | | ferritin | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.55 | GFF3361 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.24 | GFF2804 | | Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) | low | > 90 |
| Variovorax sp. OAS795 | 0.55 | ABID97_RS08460 | | 3-isopropylmalate dehydratase small subunit | 0.23 | ABID97_RS01565 | | DNA starvation/stationary phase protection protein | — | — |
| Methylophilus sp. DMC18 | 0.55 | GFF647 | | 3-isopropylmalate dehydratase small subunit 1 | 0.29 | GFF348 | | putative protein | — | — |
| Castellaniella sp019104865 MT123 | 0.53 | ABCV34_RS04285 | | 3-isopropylmalate dehydratase small subunit | 0.21 | ABCV34_RS03580 | | Dps family protein | low | > 48 |
| Azospirillum sp. SherDot2 | 0.53 | MPMX19_00606 | | 3-isopropylmalate dehydratase small subunit 1 | 0.28 | MPMX19_02373 | | DNA protection during starvation protein 2 | low | > 112 |
| Dechlorosoma suillum PS | 0.53 | Dsui_3199 | | 3-isopropylmalate dehydratase, small subunit | 0.26 | Dsui_0822 | | DNA-binding ferritin-like protein (oxidative damage protectant) | — | — |
| Azospirillum brasilense Sp245 | 0.52 | AZOBR_RS14135 | | isopropylmalate isomerase | 0.30 | AZOBR_RS12945 | | ferritin | — | — |
| Acidovorax sp. GW101-3H11 | 0.52 | Ac3H11_1527 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.24 | Ac3H11_786 | | Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) | — | — |
| Dinoroseobacter shibae DFL-12 | 0.51 | Dshi_0083 | | 3-isopropylmalate dehydratase, small subunit (RefSeq) | 0.22 | Dshi_4223 | | Ferritin Dps family protein (RefSeq) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_001215 | | 3-isopropylmalate dehydratase small subunit | 0.24 | TX73_014275 | | DNA starvation/stationary phase protection protein | — | — |
| Rhodospirillum rubrum S1H | 0.50 | Rru_A1190 | | 3-isopropylmalate dehydratase small subunit region (NCBI) | 0.27 | Rru_A0333 | | Ferritin and Dps (NCBI) | low | > 58 |
| Phaeobacter inhibens DSM 17395 | 0.50 | PGA1_c29790 | | 3-isopropylmalate dehydratase small subunit | 0.22 | PGA1_262p00250 | | ferritin-like protein | low | > 62 |
| Rhizobium sp. OAE497 | 0.49 | ABIE40_RS19040 | | 3-isopropylmalate dehydratase small subunit | 0.18 | ABIE40_RS25400 | | DNA starvation/stationary phase protection protein | low | > 107 |
| Xanthobacter sp. DMC5 | 0.47 | GFF1843 | | 3-isopropylmalate dehydratase small subunit 1 | 0.29 | GFF899 | | DNA protection during starvation protein 1 | — | — |
| Rhodanobacter sp000427505 FW510-R12 | 0.44 | LRK53_RS16370 | | 3-isopropylmalate dehydratase small subunit | 0.31 | LRK53_RS15890 | | DNA starvation/stationary phase protection protein | low | > 59 |
| Caulobacter crescentus NA1000 Δfur | 0.43 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.25 | CCNA_02966 | | non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase | low | > 67 |
| Caulobacter crescentus NA1000 | 0.43 | CCNA_00195 | | 3-isopropylmalate dehydratase small subunit | 0.25 | CCNA_02966 | | non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase | low | > 66 |
| Rhodanobacter denitrificans MT42 | 0.42 | LRK55_RS07100 | | 3-isopropylmalate dehydratase small subunit | 0.32 | LRK55_RS12415 | | Dps family protein | low | > 63 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.42 | ABZR88_RS11600 | | 3-isopropylmalate dehydratase small subunit | 0.41 | ABZR88_RS06705 | | Dps family protein | — | — |
| Rhodanobacter denitrificans FW104-10B01 | 0.42 | LRK54_RS07370 | | 3-isopropylmalate dehydratase small subunit | 0.33 | LRK54_RS12710 | | DNA starvation/stationary phase protection protein | low | > 59 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.41 | CA264_09440 | | 3-isopropylmalate dehydratase small subunit | 0.62 | CA264_12205 | | DNA starvation/stationary phase protection protein | low | > 74 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.41 | CA265_RS15840 | | 3-isopropylmalate dehydratase small subunit | 0.34 | CA265_RS06325 | | DNA starvation/stationary phase protection protein | low | > 88 |
| Bacteroides stercoris CC31F | 0.40 | HMPREF1181_RS14140 | | 3-isopropylmalate dehydratase small subunit | 0.45 | HMPREF1181_RS02165 | | DNA starvation/stationary phase protection protein | low | > 56 |
| Parabacteroides merdae CL09T00C40 | 0.39 | HMPREF1078_RS16655 | | 3-isopropylmalate dehydratase small subunit | 0.50 | HMPREF1078_RS01145 | | Dps family protein | low | > 61 |
| Bacteroides ovatus ATCC 8483 | 0.39 | BACOVA_04602 | | 3-isopropylmalate dehydratase, small subunit | 0.46 | BACOVA_05566 | | DNA protection during starvation protein | low | > 96 |
| Phocaeicola dorei CL03T12C01 | 0.38 | ABI39_RS10205 | | 3-isopropylmalate dehydratase small subunit | 0.48 | ABI39_RS06080 | | DNA starvation/stationary phase protection protein | low | > 72 |
| Dyella japonica UNC79MFTsu3.2 | 0.38 | ABZR86_RS15955 | | 3-isopropylmalate dehydratase small subunit | 0.34 | ABZR86_RS19715 | | Dps family protein | low | > 74 |
| Sphingobium sp. HT1-2 | 0.38 | GFF2628 | | 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) | 0.20 | GFF3338 | | DNA protection during starvation protein | low | > 95 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.38 | BT1859 | | 3-isopropylmalate dehydratase small subunit (NCBI ptt file) | 0.46 | BT4715 | | non-specific DNA-binding protein Dps (NCBI ptt file) | low | > 81 |
| Lysobacter sp. OAE881 | 0.37 | ABIE51_RS17580 | | 3-isopropylmalate dehydratase small subunit | 0.28 | ABIE51_RS05150 | | Dps family protein | low | > 62 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.36 | A4249_RS10000 | | 3-isopropylmalate dehydratase small subunit | 0.22 | A4249_RS05095 | | DNA starvation/stationary phase protection protein | low | > 48 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.36 | Echvi_2060 | | 3-isopropylmalate dehydratase, small subunit | 0.53 | Echvi_0586 | | DNA-binding ferritin-like protein (oxidative damage protectant) | — | — |
| Cellulophaga baltica 18 | 0.36 | M666_RS15055 | | 3-isopropylmalate dehydratase small subunit | 0.50 | M666_RS10830 | | DNA starvation/stationary phase protection protein | low | > 67 |
| Synechocystis sp000284455 PCC 6803 | 0.30 | SGL_RS10800 | | 3-isopropylmalate dehydratase small subunit | 0.33 | SGL_RS05855 | | Dps family protein | — | — |
| Synechococcus elongatus PCC 7942 | 0.25 | Synpcc7942_2548 | leuD | isopropylmalate isomerase small subunit | 0.27 | Synpcc7942_0109 | | DNA-binding ferritin-like protein (oxidative damage protectant)-like | — | — |
Not shown: 39 genomes with orthologs for CSW01_12610 only; 2 genomes with orthologs for CSW01_00700 only