Conservation of cofitness between CCNA_01399 and CCNA_01976 in Caulobacter crescentus NA1000 Δfur

66 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Caulobacter crescentus NA1000 Δfur 1.0 CCNA_01399 ammonium transporter/methylammonium transporter 1.0 CCNA_01976 Indole-3-glycerol phosphate synthase 0.78 5
Caulobacter crescentus NA1000 1.00 CCNA_01399 ammonium transporter/methylammonium transporter 1.00 CCNA_01976 Indole-3-glycerol phosphate synthase low > 66
Sphingomonas koreensis DSMZ 15582 0.53 Ga0059261_2256 ammonium transporter 0.53 Ga0059261_0930 indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 68
Bosea sp. OAE506 0.52 ABIE41_RS04755 ammonium transporter 0.57 ABIE41_RS17425 indole-3-glycerol phosphate synthase TrpC — —
Rhodopseudomonas palustris CGA009 0.51 TX73_001435 ammonium transporter 0.56 TX73_014985 indole-3-glycerol phosphate synthase TrpC — —
Rhizobium sp. OAE497 0.48 ABIE40_RS18420 ammonium transporter 0.59 ABIE40_RS09550 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS06700 ammonium transporter 0.41 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC low > 80
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS10850 ammonia channel protein 0.46 RALBFv3_RS20300 indole-3-glycerol phosphate synthase TrpC low > 76
Ralstonia solanacearum UW163 0.47 UW163_RS02730 ammonia channel protein 0.46 UW163_RS18875 indole-3-glycerol phosphate synthase TrpC — —
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS00425 ammonia channel protein 0.41 HSERO_RS19450 indole-3-glycerol-phosphate synthase low > 78
Ralstonia solanacearum PSI07 0.47 RPSI07_RS22460 ammonia channel protein 0.47 RPSI07_RS02565 indole-3-glycerol phosphate synthase TrpC low > 81
Ralstonia solanacearum GMI1000 0.47 RS_RS01690 ammonium transporter 0.46 RS_RS20380 indole-3-glycerol phosphate synthase 2 low > 80
Sinorhizobium meliloti 1021 0.46 SMc03807 ammonium transporter 0.55 SMc00236 Indole-3-glycerol phosphate synthase low > 103
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS01760 ammonia channel protein 0.41 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Pseudomonas sp. RS175 0.43 PFR28_04382 Ammonia channel 0.48 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Lysobacter sp. OAE881 0.43 ABIE51_RS01435 ammonium transporter 0.48 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_4412 Ammonium transporter 0.48 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.32 62
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_12705 ammonia channel protein 0.47 AO356_14440 indole-3-glycerol-phosphate synthase 0.27 63
Acidovorax sp. GW101-3H11 0.42 Ac3H11_3401 Ammonium transporter 0.44 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 79
Agrobacterium fabrum C58 0.42 Atu2758 ammonium transporter 0.54 Atu1688 indole-3-glycerol-phosphate synthase low > 89
Xanthomonas campestris pv. campestris strain 8004 0.42 Xcc-8004.249.1 Ammonium transporter 0.45 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.63 53
Variovorax sp. OAS795 0.42 ABID97_RS03635 ammonium transporter 0.44 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Pseudomonas stutzeri RCH2 0.41 Psest_3772 ammonium transporter 0.47 Psest_3647 Indole-3-glycerol phosphate synthase low > 67
Pseudomonas sp. S08-1 0.40 OH686_13760 Ammonium transporter 0.49 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS09495 ammonium transporter 0.43 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.44 32
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29300 ammonium transporter 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29300 ammonium transporter 0.48 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.14 88
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_838 Ammonium transporter 0.48 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Dechlorosoma suillum PS 0.39 Dsui_0763 ammonium transporter 0.42 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Variovorax sp. SCN45 0.39 GFF5119 Ammonium transporter 0.43 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2167 Ammonium transporter 0.48 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 87
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_14925 Ammonium transporter 0.47 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_09070 ammonia channel protein 0.47 AO353_07210 indole-3-glycerol-phosphate synthase low > 101
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS08110 ammonium transporter 0.42 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS07860 ammonium transporter 0.42 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF1922 Ammonium transporter 0.45 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 90
Azospirillum sp. SherDot2 0.38 MPMX19_02223 Ammonia channel 0.57 MPMX19_01014 Indole-3-glycerol phosphate synthase low > 112
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_0189 ammonium transporter 0.58 Psyr_0756 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_0189 ammonium transporter 0.58 Psyr_0756 indole-3-glycerol phosphate synthase 0.34 24
Pseudomonas simiae WCS417 0.37 PS417_27615 ammonia channel protein 0.48 PS417_25710 indole-3-glycerol-phosphate synthase low > 88
Rhodospirillum rubrum S1H 0.37 Rru_A1129 Ammonium transporter (NCBI) 0.53 Rru_A1897 Indole-3-glycerol-phosphate synthase (NCBI) low > 58
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS01405 ammonium transporter 0.41 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Acinetobacter radioresistens SK82 0.37 MPMX26_00150 Ammonia channel 0.43 MPMX26_00983 Indole-3-glycerol phosphate synthase low > 36
Pseudomonas putida KT2440 0.37 PP_5233 ammonium transporter AmtB 0.47 PP_0422 Indole-3-glycerol phosphate synthase low > 96
Burkholderia phytofirmans PsJN 0.36 BPHYT_RS02550 ammonia channel protein 0.38 BPHYT_RS17405 indole-3-glycerol phosphate synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_02012 ammonium transporter 0.38 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Paraburkholderia graminis OAS925 0.36 ABIE53_000655 Amt family ammonium transporter 0.39 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Magnetospirillum magneticum AMB-1 0.35 AMB_RS00080 ammonium transporter 0.46 AMB_RS14415 indole-3-glycerol phosphate synthase TrpC — —
Azospirillum brasilense Sp245 0.35 AZOBR_RS00845 ammonia channel protein 0.54 AZOBR_RS07450 indole-3-glycerol-phosphate synthase low > 97
Bacteroides ovatus ATCC 8483 0.35 BACOVA_03766 ammonium transporter 0.33 BACOVA_03783 indole-3-glycerol phosphate synthase low > 94
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS09990 ammonium transporter 0.73 A4249_RS06175 indole-3-glycerol phosphate synthase TrpC — —
Castellaniella sp019104865 MT123 0.30 ABCV34_RS04770 ammonium transporter 0.43 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Phaeobacter inhibens DSM 17395 0.29 PGA1_c14730 ammonia channel 0.49 PGA1_c16910 indole-3-glycerol phosphate synthase TrpC — —
Pedobacter sp. GW460-11-11-14-LB5 0.24 CA265_RS14975 ammonia channel protein 0.32 CA265_RS22900 indole-3-glycerol phosphate synthase low > 88
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_3535 ammonium transporter 0.30 Echvi_2508 Indole-3-glycerol phosphate synthase — —
Mycobacterium tuberculosis H37Rv 0.24 Rv2920c Probable ammonium-transport integral membrane protein Amt 0.31 Rv1611 Probable indole-3-glycerol phosphate synthase TrpC — —
Synechococcus elongatus PCC 7942 0.24 Synpcc7942_2279 amtB ammonium transporter 0.39 Synpcc7942_1197 trpC indole-3-glycerol-phosphate synthase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.23 ABZR88_RS15715 ammonium transporter 0.29 ABZR88_RS16605 indole-3-glycerol phosphate synthase TrpC — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_09145 ammonia channel protein 0.23 CA264_05070 indole-3-glycerol phosphate synthase 0.44 10
Bacteroides stercoris CC31F 0.19 HMPREF1181_RS16015 ammonium transporter 0.29 HMPREF1181_RS15340 indole-3-glycerol phosphate synthase TrpC low > 56
Bacteroides thetaiotaomicron VPI-5482 0.19 BT0544 ammonium transporter (NCBI ptt file) 0.33 BT0529 indole-3-glycerol phosphate synthase (NCBI ptt file) low > 81
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS14275 ammonium transporter 0.25 ABI39_RS21065 indole-3-glycerol phosphate synthase TrpC low > 72
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS06895 ammonium transporter 0.25 HMPREF1058_RS07190 indole-3-glycerol phosphate synthase TrpC low > 67
Dinoroseobacter shibae DFL-12 0.14 Dshi_0144 ammonium transporter (RefSeq) 0.51 Dshi_1800 Indole-3-glycerol-phosphate synthase (RefSeq) — —
Methanococcus maripaludis JJ 0.13 MMJJ_RS05110 ammonium transporter 0.20 MMJJ_RS09165 indole-3-glycerol phosphate synthase TrpC — —
Methanococcus maripaludis S2 0.12 MMP_RS00375 ammonium transporter 0.20 MMP_RS05215 indole-3-glycerol phosphate synthase TrpC — —
Marinobacter adhaerens HP15 0.12 HP15_274 ammonium/methylammonium permease 0.43 HP15_3291 indole-3-glycerol phosphate synthase low > 73

Not shown: 34 genomes with orthologs for CCNA_01399 only; 1 genomes with orthologs for CCNA_01976 only