Conservation of cofitness between BPHYT_RS02150 and BPHYT_RS17760 in Burkholderia phytofirmans PsJN

76 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS02150 biotin synthase 1.0 BPHYT_RS17760 ABC transporter permease 0.24 20
Paraburkholderia bryophila 376MFSha3.1 0.91 H281DRAFT_02097 biotin synthase 0.97 H281DRAFT_05642 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 103
Paraburkholderia graminis OAS925 0.90 ABIE53_000577 biotin synthase 0.96 ABIE53_003711 phospholipid/cholesterol/gamma-HCH transport system permease protein low > 113
Paraburkholderia sabiae LMG 24235 0.85 QEN71_RS01085 biotin synthase BioB 0.89 QEN71_RS27915 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Ralstonia solanacearum PSI07 0.71 RPSI07_RS22850 biotin synthase BioB 0.74 RPSI07_RS10340 ABC transporter permease low > 81
Ralstonia solanacearum GMI1000 0.70 RS_RS01305 biotin synthase 0.75 RS_RS14840 ABC transporter permease low > 80
Ralstonia solanacearum UW163 0.70 UW163_RS03115 biotin synthase BioB 0.74 UW163_RS06720 ABC transporter permease
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS10465 biotin synthase BioB 0.74 RALBFv3_RS06895 ABC transporter permease
Ralstonia sp. UNC404CL21Col 0.69 ABZR87_RS06265 biotin synthase BioB 0.75 ABZR87_RS02550 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 80
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS00940 biotin synthase 0.78 RR42_RS18965 ABC transporter permease 0.42 63
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3992 Biotin synthase (EC 2.8.1.6) 0.70 GFF1324 Uncharacterized ABC transporter, permease component YrbE low > 90
Dyella japonica UNC79MFTsu3.2 0.59 ABZR86_RS15840 biotin synthase BioB 0.50 ABZR86_RS11880 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 74
Acidovorax sp. GW101-3H11 0.57 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.76 Ac3H11_4713 Uncharacterized ABC transporter, permease component YrbE low > 79
Castellaniella sp019104865 MT123 0.57 ABCV34_RS15280 biotin synthase BioB 0.72 ABCV34_RS11185 lipid asymmetry maintenance ABC transporter permease subunit MlaE
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_05645 biotin synthase 0.58 CSW01_12770 ABC transporter permease low > 62
Marinobacter adhaerens HP15 0.57 HP15_2486 biotin synthase 0.56 HP15_2435 ABC-type transport system involved in resistance to organic solvents, permease component low > 73
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS12235 biotin synthase 0.73 HSERO_RS20395 ABC transporter permease
Pseudomonas putida KT2440 0.57 PP_0362 Biotin synthase 0.58 PP_0959 phospholipid ABC transporter low > 96
Pseudomonas stutzeri RCH2 0.57 Psest_0411 biotin synthetase 0.57 Psest_3306 conserved hypothetical integral membrane protein low > 67
Pseudomonas sp. S08-1 0.57 OH686_10355 biotin synthase 0.58 OH686_08505 Phospholipid ABC transporter permease protein MlaE low > 80
Escherichia coli ECRC98 0.57 JDDGAC_10035 bioB biotin synthase BioB 0.56 JDDGAC_21605 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 86
Escherichia coli ECRC99 0.57 KEDOAH_21510 bioB biotin synthase BioB 0.56 KEDOAH_10170 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Alteromonas macleodii MIT1002 0.57 MIT1002_01379 Biotin synthase 0.59 MIT1002_00835 putative phospholipid ABC transporter permease protein MlaE low > 70
Escherichia coli ECRC100 0.57 OKFHMN_06400 bioB biotin synthase BioB 0.56 OKFHMN_17980 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 80
Escherichia coli ECRC101 0.57 MCAODC_25615 bioB biotin synthase BioB 0.56 MCAODC_08500 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 87
Escherichia coli ECRC102 0.57 NIAGMN_04445 bioB biotin synthase BioB 0.56 NIAGMN_15740 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Escherichia coli BW25113 0.56 b0775 bioB biotin synthase (NCBI) 0.56 b3194 yrbE predicted toluene transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Enterobacter sp. TBS_079 0.56 MPMX20_01403 Biotin synthase 0.56 MPMX20_04100 Intermembrane phospholipid transport system permease protein MlaE 0.20 80
Escherichia coli ECRC62 0.56 BNILDI_21040 bioB biotin synthase BioB 0.56 BNILDI_01755 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4687 biotin synthase 0.57 Psyr_4140 Protein of unknown function DUF140 low > 86
Pantoea sp. MT58 0.56 IAI47_13530 biotin synthase BioB 0.59 IAI47_17140 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 76
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27650 biotin synthase BioB 0.56 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4687 biotin synthase 0.57 Psyr_4140 Protein of unknown function DUF140 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.56 OHPLBJKB_02938 Biotin synthase 0.56 OHPLBJKB_00506 putative phospholipid ABC transporter permease protein MlaE low > 73
Escherichia coli ECOR38 0.56 HEPCGN_01640 bioB biotin synthase BioB 0.56 HEPCGN_16855 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 87
Escherichia coli ECOR27 0.56 NOLOHH_22770 bioB biotin synthase BioB 0.56 NOLOHH_09780 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Lysobacter sp. OAE881 0.56 ABIE51_RS01140 biotin synthase BioB 0.38 ABIE51_RS01010 MlaE family lipid ABC transporter permease subunit low > 62
Klebsiella michiganensis M5al 0.56 BWI76_RS08760 biotin synthase 0.56 BWI76_RS25225 ABC transporter permease low > 92
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27650 biotin synthase BioB 0.56 PFLU_RS04435 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 109
Escherichia coli BL21 0.56 ECD_00742 biotin synthase 0.56 ECD_03059 ABC transporter maintaining OM lipid asymmetry, inner membrane permease protein low > 61
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.57 Pf6N2E2_3259 Uncharacterized ABC transporter, permease component YrbE
Variovorax sp. SCN45 0.56 GFF937 Biotin synthase (EC 2.8.1.6) 0.74 GFF5335 Phospholipid ABC transporter permease protein MlaE low > 127
Enterobacter asburiae PDN3 0.56 EX28DRAFT_2216 biotin synthase (EC 2.8.1.6) 0.56 EX28DRAFT_3248 ABC transport permease subunit low > 76
Shewanella amazonensis SB2B 0.56 Sama_1438 biotin synthase (RefSeq) 0.56 Sama_3080 hypothetical protein (RefSeq)
Xanthomonas campestris pv. campestris strain 8004 0.56 Xcc-8004.505.1 Biotin synthase (EC 2.8.1.6) 0.44 Xcc-8004.5365.1 Uncharacterized ABC transporter, permease component YrbE low > 74
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_14135 biotin synthase 0.57 AO356_07000 ABC transporter permease low > 104
Escherichia fergusonii Becca 0.56 EFB2_03330 Biotin synthase 0.56 EFB2_00629 Intermembrane phospholipid transport system permease protein MlaE low > 86
Escherichia coli Nissle 1917 0.56 ECOLIN_RS04130 biotin synthase BioB 0.56 ECOLIN_RS18385 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF671 Biotin synthase (EC 2.8.1.6) 0.57 GFF2938 Uncharacterized ABC transporter, permease component YrbE low > 78
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_07525 biotin synthase 0.58 AO353_05145 ABC transporter permease low > 101
Pseudomonas simiae WCS417 0.56 PS417_26005 biotin synthase 0.57 PS417_04380 ABC transporter permease low > 88
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.56 Pf1N1B4_1073 Uncharacterized ABC transporter, permease component YrbE
Erwinia tracheiphila SCR3 0.56 LU632_RS09130 bioB biotin synthase BioB 0.59 LU632_RS21240 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE
Dechlorosoma suillum PS 0.56 Dsui_1297 biotin synthetase 0.62 Dsui_1399 conserved hypothetical integral membrane protein low > 51
Pseudomonas sp. RS175 0.56 PFR28_04103 Biotin synthase 0.57 PFR28_00180 Intermembrane phospholipid transport system permease protein MlaE low > 88
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.57 PfGW456L13_5007 Uncharacterized ABC transporter, permease component YrbE
Dickeya dadantii 3937 0.55 DDA3937_RS08510 biotin synthase BioB 0.57 DDA3937_RS01570 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS08965 biotin synthase BioB 0.56 DZA65_RS01550 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Serratia liquefaciens MT49 0.55 IAI46_06525 biotin synthase BioB 0.58 IAI46_22425 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 86
Variovorax sp. OAS795 0.55 ABID97_RS13955 biotin synthase BioB 0.75 ABID97_RS23210 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 91
Rhodanobacter sp. FW510-T8 0.55 OKGIIK_13650 bioB biotin synthase BioB 0.49 OKGIIK_12130 mlaE lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 52
Rahnella sp. WP5 0.55 EX31_RS23695 biotin synthase BioB 0.58 EX31_RS12440 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 89
Rhodanobacter denitrificans MT42 0.55 LRK55_RS09900 biotin synthase BioB 0.49 LRK55_RS11490 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 63
Dickeya dianthicola 67-19 0.55 HGI48_RS08675 biotin synthase BioB 0.56 HGI48_RS01485 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 71
Rhodanobacter denitrificans FW104-10B01 0.55 LRK54_RS10260 biotin synthase BioB 0.49 LRK54_RS11765 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 59
Shewanella oneidensis MR-1 0.55 SO2740 bioB biotin synthase (NCBI ptt file) 0.56 SO3953 conserved hypothetical protein TIGR00056 (NCBI ptt file)
Shewanella loihica PV-4 0.55 Shew_1719 biotin synthase (RefSeq) 0.55 Shew_3303 hypothetical protein (RefSeq)
Pectobacterium carotovorum WPP14 0.55 HER17_RS13460 biotin synthase BioB 0.59 HER17_RS20020 lipid asymmetry maintenance ABC transporter permease subunit MlaE low > 75
Magnetospirillum magneticum AMB-1 0.55 AMB_RS13865 biotin synthase 0.32 AMB_RS10570 ABC transporter permease
Shewanella sp. ANA-3 0.54 Shewana3_2519 biotin synthase (RefSeq) 0.56 Shewana3_0679 hypothetical protein (RefSeq) low > 73
Caulobacter crescentus NA1000 Δfur 0.52 CCNA_03636 biotin synthase 0.30 CCNA_03809 organic solvent resistance transport system permease low > 67
Acinetobacter radioresistens SK82 0.52 MPMX26_01785 Biotin synthase 0.54 MPMX26_02740 Intermembrane phospholipid transport system permease protein MlaE low > 36
Caulobacter crescentus NA1000 0.52 CCNA_03636 biotin synthase 0.30 CCNA_03809 organic solvent resistance transport system permease low > 66
Phaeobacter inhibens DSM 17395 0.51 PGA1_c09120 biotin synthase BioB 0.27 PGA1_c10870 conserved hypothetical integral membrane protein low > 62
Synechococcus elongatus PCC 7942 0.50 Synpcc7942_0419 bioB biotin synthase 0.25 Synpcc7942_0378 ycf63 Protein of unknown function DUF140
Desulfovibrio vulgaris Hildenborough JW710 0.22 DVU2558 bioB biotin synthase (Dmitry Rodionov) 0.39 DVU1246 membrane protein, putative (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.20 DvMF_1001 biotin synthase (RefSeq) 0.39 DvMF_0852 protein of unknown function DUF140 (RefSeq) low > 51

Not shown: 14 genomes with orthologs for BPHYT_RS02150 only; 4 genomes with orthologs for BPHYT_RS17760 only