Conservation of cofitness between BPHYT_RS14845 and BPHYT_RS03725 in Burkholderia phytofirmans PsJN

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS14845 cysteine synthase 1.0 BPHYT_RS03725 serine hydroxymethyltransferase 0.75 14
Paraburkholderia bryophila 376MFSha3.1 0.99 H281DRAFT_03911 cysteine synthase 0.99 H281DRAFT_04726 serine hydroxymethyltransferase — —
Paraburkholderia graminis OAS925 0.94 ABIE53_003144 cysteine synthase B 0.99 ABIE53_000888 glycine hydroxymethyltransferase — —
Paraburkholderia sabiae LMG 24235 0.94 QEN71_RS04135 cysteine synthase CysM 0.94 QEN71_RS26235 serine hydroxymethyltransferase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS04560 cysteine synthase CysM 0.85 RS_RS03670 serine hydroxymethyltransferase — —
Ralstonia solanacearum IBSBF1503 0.82 RALBFv3_RS13825 cysteine synthase CysM 0.85 RALBFv3_RS12895 serine hydroxymethyltransferase — —
Ralstonia solanacearum UW163 0.82 UW163_RS15985 cysteine synthase CysM 0.85 UW163_RS00670 serine hydroxymethyltransferase — —
Ralstonia sp. UNC404CL21Col 0.82 ABZR87_RS09515 cysteine synthase CysM 0.86 ABZR87_RS08955 serine hydroxymethyltransferase — —
Ralstonia solanacearum PSI07 0.82 RPSI07_RS19645 cysteine synthase CysM 0.85 RPSI07_RS20330 serine hydroxymethyltransferase — —
Herbaspirillum seropedicae SmR1 0.82 HSERO_RS04915 cysteine synthase 0.84 HSERO_RS06140 serine hydroxymethyltransferase — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS04535 cysteine synthase 0.86 RR42_RS15485 serine hydroxymethyltransferase — —
Dechlorosoma suillum PS 0.79 Dsui_1954 cysteine synthase B 0.79 Dsui_1265 glycine/serine hydroxymethyltransferase — —
Variovorax sp. SCN45 0.75 GFF6025 Cysteine synthase B (EC 2.5.1.47) 0.79 GFF560 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Variovorax sp. OAS795 0.74 ABID97_RS07880 cysteine synthase CysM 0.79 ABID97_RS17890 serine hydroxymethyltransferase — —
Acidovorax sp. GW101-3H11 0.73 Ac3H11_644 Cysteine synthase B (EC 2.5.1.47) 0.78 Ac3H11_2921 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.73 GFF709 Cysteine synthase B (EC 2.5.1.47) 0.80 GFF5152 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Marinobacter adhaerens HP15 0.69 HP15_789 cysteine synthase B 0.66 HP15_489 glycine hydroxymethyltransferase — —
Pseudomonas putida KT2440 0.68 PP_1654 cysteine synthase B 0.65 PP_0671 serine hydroxymethyltransferase — —
Pseudomonas simiae WCS417 0.68 PS417_20160 cysteine synthase 0.65 PS417_24280 serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_02720 cysteine synthase 0.65 AO353_14020 serine hydroxymethyltransferase — —
Pseudomonas stutzeri RCH2 0.67 Psest_1638 cysteine synthase B 0.67 Psest_3404 Glycine/serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_19050 cysteine synthase 0.65 AO356_16850 serine hydroxymethyltransferase low > 104
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3506 Cysteine synthase B (EC 2.5.1.47) 0.65 Pf1N1B4_2778 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_2032 Cysteine synthase B (EC 2.5.1.47) 0.65 PfGW456L13_1451 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas sp. RS175 0.67 PFR28_03225 Cysteine synthase B 0.65 PFR28_03786 Serine hydroxymethyltransferase — —
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5721 Cysteine synthase B (EC 2.5.1.47) 0.65 Pf6N2E2_5082 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Pseudomonas sp. S08-1 0.67 OH686_18950 cysteine synthase B 0.65 OH686_16230 Serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS22105 cysteine synthase CysM 0.65 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS22105 cysteine synthase CysM 0.65 PFLU_RS26195 serine hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3697 cysteine synthase 0.64 Psyr_4270 serine hydroxymethyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3697 cysteine synthase 0.64 Psyr_4270 serine hydroxymethyltransferase — —
Castellaniella sp019104865 MT123 0.66 ABCV34_RS07055 cysteine synthase CysM 0.77 ABCV34_RS10555 serine hydroxymethyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_02845 cysteine synthase CysM 0.64 CSW01_04820 serine hydroxymethyltransferase low > 62
Acinetobacter radioresistens SK82 0.61 MPMX26_00536 Cysteine synthase B 0.63 MPMX26_02049 Serine hydroxymethyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF2055 Cysteine synthase (EC 2.5.1.47) 0.66 GFF2447 Serine hydroxymethyltransferase (EC 2.1.2.1) — —
Klebsiella michiganensis M5al 0.61 BWI76_RS20685 cysteine synthase B 0.65 BWI76_RS21225 serine hydroxymethyltransferase — —
Rahnella sp. WP5 0.60 EX31_RS20205 cysteine synthase CysM 0.68 EX31_RS20585 serine hydroxymethyltransferase — —
Escherichia coli Nissle 1917 0.60 ECOLIN_RS13900 cysteine synthase B 0.65 ECOLIN_RS14440 serine hydroxymethyltransferase — —
Escherichia coli ECOR38 0.60 HEPCGN_21345 cysM cysteine synthase B 0.65 HEPCGN_20655 glyA serine hydroxymethyltransferase low > 87
Escherichia coli BW25113 0.60 b2421 cysM cysteine synthase B (O-acetylserine sulfhydrolase B) (NCBI) 0.65 b2551 glyA serine hydroxymethyltransferase (NCBI) — —
Escherichia fergusonii Becca 0.60 EFB2_01456 Cysteine synthase B 0.65 EFB2_01345 Serine hydroxymethyltransferase — —
Escherichia coli ECRC62 0.60 BNILDI_12715 cysM cysteine synthase B 0.65 BNILDI_11985 glyA serine hydroxymethyltransferase 0.60 45
Enterobacter asburiae PDN3 0.60 EX28DRAFT_0209 cysteine synthase B 0.65 EX28DRAFT_0099 Glycine/serine hydroxymethyltransferase — —
Escherichia coli ECOR27 0.60 NOLOHH_13850 cysM cysteine synthase B 0.65 NOLOHH_13185 glyA serine hydroxymethyltransferase low > 75
Enterobacter sp. TBS_079 0.60 MPMX20_03313 Cysteine synthase B 0.65 MPMX20_03420 Serine hydroxymethyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_01302 Cysteine synthase B 0.65 OHPLBJKB_01156 Serine hydroxymethyltransferase low > 73
Escherichia coli BL21 0.60 ECD_02321 cysteine synthase B (O-acetylserine sulfhydrolase B) 0.65 ECD_02443 serine hydroxymethyltransferase low > 61
Dickeya dadantii 3937 0.60 DDA3937_RS04425 cysteine synthase CysM 0.67 DDA3937_RS15600 serine hydroxymethyltransferase — —
Dickeya dianthicola ME23 0.59 DZA65_RS04315 cysteine synthase CysM 0.67 DZA65_RS16775 serine hydroxymethyltransferase — —
Shewanella sp. ANA-3 0.59 Shewana3_3188 cysM cysteine synthase B (RefSeq) 0.68 Shewana3_1094 glyA serine hydroxymethyltransferase (RefSeq) low > 73
Escherichia coli ECRC98 0.59 JDDGAC_26120 cysM cysteine synthase B 0.65 JDDGAC_25175 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC99 0.59 KEDOAH_06050 cysM cysteine synthase B 0.65 KEDOAH_06710 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC100 0.59 OKFHMN_22170 cysM cysteine synthase B 0.65 OKFHMN_21510 glyA serine hydroxymethyltransferase low > 80
Escherichia coli ECRC102 0.59 NIAGMN_19940 cysM cysteine synthase B 0.65 NIAGMN_19280 glyA serine hydroxymethyltransferase — —
Escherichia coli ECRC101 0.59 MCAODC_12700 cysM cysteine synthase B 0.65 MCAODC_12040 glyA serine hydroxymethyltransferase low > 87
Shewanella oneidensis MR-1 0.59 SO3598 cysM cysteine synthase B (NCBI ptt file) 0.68 SO3471 glyA serine hydroxymethyltransferase (NCBI ptt file) low > 76
Dickeya dianthicola 67-19 0.59 HGI48_RS04400 cysteine synthase CysM 0.66 HGI48_RS15700 serine hydroxymethyltransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.57 CA264_08940 cysteine synthase B 0.49 CA264_17045 serine hydroxymethyltransferase low > 74
Pectobacterium carotovorum WPP14 0.57 HER17_RS17210 cysteine synthase CysM 0.67 HER17_RS05950 serine hydroxymethyltransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.56 Echvi_0220 cysteine synthase B 0.50 Echvi_1188 Glycine/serine hydroxymethyltransferase — —
Erwinia tracheiphila SCR3 0.55 LU632_RS06675 cysM cysteine synthase CysM 0.67 LU632_RS17915 serine hydroxymethyltransferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.55 CA265_RS10150 cysteine synthase B 0.52 CA265_RS19165 serine hydroxymethyltransferase low > 88
Serratia liquefaciens MT49 0.55 IAI46_18490 cysteine synthase CysM 0.67 IAI46_19395 serine hydroxymethyltransferase — —
Pantoea sp. MT58 0.54 IAI47_05405 cysteine synthase CysM 0.67 IAI47_04960 serine hydroxymethyltransferase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT1852 cysteine synthase A (NCBI ptt file) 0.53 BT0738 serine hydroxymethyltransferase (NCBI ptt file) 0.12 75
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS08075 cysteine synthase A 0.51 HMPREF1078_RS02145 serine hydroxymethyltransferase — —
Bacteroides ovatus ATCC 8483 0.37 BACOVA_04596 cysteine synthase A 0.54 BACOVA_02446 glycine hydroxymethyltransferase low > 94
Bacteroides stercoris CC31F 0.36 HMPREF1181_RS14120 cysteine synthase A 0.53 HMPREF1181_RS15010 serine hydroxymethyltransferase low > 56
Phocaeicola vulgatus CL09T03C04 0.36 HMPREF1058_RS02875 cysteine synthase A 0.54 HMPREF1058_RS03800 serine hydroxymethyltransferase low > 67
Phocaeicola dorei CL03T12C01 0.36 ABI39_RS02185 cysteine synthase A 0.54 ABI39_RS17420 serine hydroxymethyltransferase low > 72
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1247.1 Cysteine synthase (EC 2.5.1.47) 0.67 Xcc-8004.4398.1 Serine hydroxymethyltransferase (EC 2.1.2.1) low > 74
Lysobacter sp. OAE881 0.35 ABIE51_RS16995 cysteine synthase A 0.67 ABIE51_RS04620 serine hydroxymethyltransferase low > 62
Synechococcus elongatus PCC 7942 0.35 Synpcc7942_B2664 srpG cysteine synthase 0.61 Synpcc7942_0282 glyA serine hydroxymethyltransferase — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2334 Cysteine synthase a CysK1 (O-acetylserine sulfhydrylase A) (O-acetylserine (thiol)-lyase A) (CSASE A) 0.52 Rv0070c Serine hydroxymethyltransferase GlyA2 (serine methylase 2) (SHMT 2) — —
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00680 cysteine synthase A 0.67 LRK55_RS04400 serine hydroxymethyltransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00905 cysteine synthase A 0.67 LRK54_RS04625 serine hydroxymethyltransferase 0.54 54
Kangiella aquimarina DSM 16071 0.32 B158DRAFT_1208 cystathionine beta-synthase (acetylserine-dependent) (EC 4.2.1.-) 0.63 B158DRAFT_1908 Glycine/serine hydroxymethyltransferase low > 40
Alteromonas macleodii MIT1002 0.31 MIT1002_02237 Cysteine synthase A 0.62 MIT1002_02702 Serine hydroxymethyltransferase — —
Shewanella loihica PV-4 0.31 Shew_2382 cysteine synthase A (RefSeq) 0.68 Shew_1185 glyA serine hydroxymethyltransferase (RefSeq) 0.81 13
Shewanella amazonensis SB2B 0.30 Sama_1508 cysteine synthase A (RefSeq) 0.68 Sama_1014 glyA serine hydroxymethyltransferase (RefSeq) 0.89 53

Not shown: 19 genomes with orthologs for BPHYT_RS14845 only; 2 genomes with orthologs for BPHYT_RS03725 only