Conservation of cofitness between BPHYT_RS33580 and BPHYT_RS03555 in Burkholderia phytofirmans PsJN

80 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS33580 geranyltranstransferase 1.0 BPHYT_RS03555 glutamine-synthetase adenylyltransferase 0.43 9
Paraburkholderia bryophila 376MFSha3.1 0.96 H281DRAFT_06016 farnesyl-diphosphate synthase 0.91 H281DRAFT_04691 glutamate-ammonia-ligase adenylyltransferase
Paraburkholderia sabiae LMG 24235 0.86 QEN71_RS15235 polyprenyl synthetase family protein 0.84 QEN71_RS26540 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS19130 geranyl transferase 0.45 HSERO_RS07140 glutamine-synthetase adenylyltransferase
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS15010 geranyl transferase 0.55 RR42_RS05890 glutamine-synthetase adenylyltransferase
Dechlorosoma suillum PS 0.57 Dsui_3509 geranylgeranyl pyrophosphate synthase 0.43 Dsui_3404 glutamine synthetase adenylyltransferase
Ralstonia sp. UNC404CL21Col 0.56 ABZR87_RS15640 polyprenyl synthetase family protein 0.56 ABZR87_RS01090 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Ralstonia solanacearum IBSBF1503 0.55 RALBFv3_RS03710 (2E,6E)-farnesyl diphosphate synthase 0.55 RALBFv3_RS05440 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Ralstonia solanacearum UW163 0.55 UW163_RS09960 (2E,6E)-farnesyl diphosphate synthase 0.55 UW163_RS08185 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Ralstonia solanacearum PSI07 0.54 RPSI07_RS13520 polyprenyl synthetase family protein 0.55 RPSI07_RS11865 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Ralstonia solanacearum GMI1000 0.52 RS_RS11155 polyprenyl synthetase family protein 0.55 RS_RS13300 [glutamate--ammonia-ligase] adenylyltransferase
Castellaniella sp019104865 MT123 0.52 ABCV34_RS02230 polyprenyl synthetase family protein 0.37 ABCV34_RS06200 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Lysobacter sp. OAE881 0.49 ABIE51_RS06815 (2E,6E)-farnesyl diphosphate synthase 0.24 ABIE51_RS17670 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 62
Rhodanobacter sp. FW510-T8 0.48 OKGIIK_10250 ispA geranyl transferase 0.24 OKGIIK_16880 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Erwinia tracheiphila SCR3 0.48 LU632_RS23555 polyprenyl synthetase family protein 0.27 LU632_RS20675 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 74
Variovorax sp. SCN45 0.47 GFF6129 (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) 0.39 GFF5443 Glutamine synthetase adenylyl-L-tyrosine phosphorylase (EC 2.7.7.89) / Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 127
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS03365 polyprenyl synthetase family protein 0.23 LRK54_RS06750 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS03115 polyprenyl synthetase family protein 0.24 LRK55_RS06495 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase low > 63
Acidovorax sp. GW101-3H11 0.45 Ac3H11_3565 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) 0.37 Ac3H11_1209 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Variovorax sp. OAS795 0.45 ABID97_RS09275 polyprenyl synthetase family protein 0.39 ABID97_RS02015 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase 0.48 77
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS21690 farnesyl diphosphate synthase 0.24 ABZR86_RS17150 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Xanthomonas campestris pv. campestris strain 8004 0.44 Xcc-8004.1890.1 hypothetical protein 0.23 Xcc-8004.723.1 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42) low > 74
Kangiella aquimarina DSM 16071 0.44 B158DRAFT_1919 farnesyl-diphosphate synthase (EC 2.5.1.10) 0.24 B158DRAFT_0849 Glutamine synthetase adenylyltransferase
Marinobacter adhaerens HP15 0.44 HP15_581 geranyltranstransferase 0.30 HP15_435 glutamate-ammonia-ligase adenylyltransferase
Pseudomonas sp. S08-1 0.44 OH686_15785 (2E,6E)-farnesyl diphosphate synthase 0.31 OH686_09700 Glutamine synthetase adenylyl-L-tyrosine phosphorylase / Glutamate-ammonia-ligase adenylyltransferase
Pseudomonas putida KT2440 0.43 PP_0528 farnesyl diphosphate synthase 0.29 PP_0340 Glutamate-ammonia-ligase adenylyltransferase
Pseudomonas fluorescens GW456-L13 0.42 PfGW456L13_1326 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) 0.30 PfGW456L13_213 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Pseudomonas fluorescens FW300-N2E3 0.42 AO353_06650 geranyl transferase 0.30 AO353_12870 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Shewanella loihica PV-4 0.42 Shew_2770 polyprenyl synthetase (RefSeq) 0.25 Shew_0628 (glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 60
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_2662 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) 0.30 Pf1N1B4_1474 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Pseudomonas stutzeri RCH2 0.42 Psest_0642 Geranylgeranyl pyrophosphate synthase 0.30 Psest_0449 Glutamine synthetase adenylyltransferase
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF5576 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) 0.39 GFF2533 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_4933 Octaprenyl-diphosphate synthase (EC 2.5.1.-) / Dimethylallyltransferase (EC 2.5.1.1) / Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) / Geranylgeranyl pyrophosphate synthetase (EC 2.5.1.29) 0.30 Pf6N2E2_3672 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Pantoea sp. MT58 0.41 IAI47_14735 (2E,6E)-farnesyl diphosphate synthase 0.28 IAI47_03100 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Pseudomonas sp. RS175 0.41 PFR28_03936 Farnesyl diphosphate synthase 0.29 PFR28_05062 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme
Shewanella oneidensis MR-1 0.41 SO1526 ispA geranyltranstransferase (NCBI ptt file) 0.25 SO3760 glnE glutamate-ammonia-ligase adenylyltransferase (NCBI ptt file)
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_0605 farnesyl-diphosphate synthase 0.29 Psyr_0519 Glutamate-ammonia-ligase adenylyltransferase
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_0605 farnesyl-diphosphate synthase 0.29 Psyr_0519 Glutamate-ammonia-ligase adenylyltransferase
Shewanella amazonensis SB2B 0.40 Sama_2435 geranyltranstransferase (RefSeq) 0.26 Sama_2663 (glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_14995 geranyl transferase 0.30 AO356_08955 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_04565 (2E,6E)-farnesyl diphosphate synthase 0.28 CSW01_12345 [glutamate--ammonia-ligase] adenylyltransferase
Rahnella sp. WP5 0.40 EX31_RS22160 (2E,6E)-farnesyl diphosphate synthase 0.28 EX31_RS08145 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Enterobacter sp. TBS_079 0.40 MPMX20_01012 Farnesyl diphosphate synthase 0.28 MPMX20_03890 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme
Klebsiella michiganensis M5al 0.40 BWI76_RS06385 (2E,6E)-farnesyl diphosphate synthase 0.28 BWI76_RS24460 bifunctional glutamine synthetase adenylyltransferase/deadenyltransferase
Pectobacterium carotovorum WPP14 0.40 HER17_RS15930 (2E,6E)-farnesyl diphosphate synthase 0.29 HER17_RS04035 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Enterobacter asburiae PDN3 0.39 EX28DRAFT_2550 Geranylgeranyl pyrophosphate synthase 0.28 EX28DRAFT_3081 Glutamine synthetase adenylyltransferase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF4325 Octaprenyl diphosphate synthase (EC 2.5.1.90) / Dimethylallyltransferase (EC 2.5.1.1) / (2E,6E)-farnesyl diphosphate synthase (EC 2.5.1.10) / Geranylgeranyl diphosphate synthase (EC 2.5.1.29) 0.28 GFF3167 Glutamate-ammonia-ligase adenylyltransferase (EC 2.7.7.42)
Pseudomonas simiae WCS417 0.38 PS417_25200 geranyl transferase 0.30 PS417_02225 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Escherichia coli ECRC98 0.38 JDDGAC_12070 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 JDDGAC_22365 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECRC100 0.38 OKFHMN_08415 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 OKFHMN_18730 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECRC99 0.38 KEDOAH_19550 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 KEDOAH_09415 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECRC102 0.38 NIAGMN_06470 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 NIAGMN_16495 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECRC101 0.38 MCAODC_27640 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 MCAODC_09245 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Pseudomonas fluorescens SBW25 0.38 PFLU_RS26840 hypothetical protein 0.31 PFLU_RS02280 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03255 Farnesyl diphosphate synthase 0.28 OHPLBJKB_00651 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS26840 hypothetical protein 0.31 PFLU_RS02280 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECRC62 0.38 BNILDI_22780 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 BNILDI_01000 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli Nissle 1917 0.38 ECOLIN_RS02540 (2E,6E)-farnesyl diphosphate synthase 0.28 ECOLIN_RS17620 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli BL21 0.38 ECD_00369 geranyltranstransferase 0.28 ECD_02923 fused deadenylyltransferase/adenylyltransferase for glutamine synthetase
Escherichia fergusonii Becca 0.38 EFB2_03636 Farnesyl diphosphate synthase 0.28 EFB2_00758 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme
Escherichia coli BW25113 0.38 b0421 ispA geranyltranstransferase (NCBI) 0.28 b3053 glnE fused deadenylyltransferase/adenylyltransferase for glutamine synthetase (NCBI)
Escherichia coli ECOR27 0.38 NOLOHH_01365 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 NOLOHH_10515 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Escherichia coli ECOR38 0.38 HEPCGN_07045 ispA (2E,6E)-farnesyl diphosphate synthase 0.28 HEPCGN_17585 glnE bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Shewanella sp. ANA-3 0.37 Shewana3_2900 farnesyl-diphosphate synthase (RefSeq) 0.26 Shewana3_0832 glutamate-ammonia ligase adenylyltransferase (RefSeq)
Dickeya dianthicola 67-19 0.37 HGI48_RS05595 (2E,6E)-farnesyl diphosphate synthase 0.27 HGI48_RS17155 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Acinetobacter radioresistens SK82 0.37 MPMX26_00661 Farnesyl diphosphate synthase 0.26 MPMX26_00444 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme
Dickeya dadantii 3937 0.37 DDA3937_RS05535 (2E,6E)-farnesyl diphosphate synthase 0.27 DDA3937_RS17105 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Dickeya dianthicola ME23 0.37 DZA65_RS05920 (2E,6E)-farnesyl diphosphate synthase 0.27 DZA65_RS18240 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_1008 Geranylgeranyl pyrophosphate synthase 0.16 Ga0059261_3494 Glutamine synthetase adenylyltransferase low > 68
Serratia liquefaciens MT49 0.36 IAI46_04930 (2E,6E)-farnesyl diphosphate synthase 0.27 IAI46_22060 bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase
Azospirillum sp. SherDot2 0.36 MPMX19_05065 Farnesyl diphosphate synthase 0.20 MPMX19_01990 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme low > 112
Rhodopseudomonas palustris CGA009 0.34 TX73_002715 polyprenyl synthetase family protein 0.21 TX73_009965 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
Alteromonas macleodii MIT1002 0.33 MIT1002_02692 Farnesyl diphosphate synthase 0.25 MIT1002_02879 Glutamate-ammonia-ligase adenylyltransferase
Caulobacter crescentus NA1000 0.32 CCNA_02150 dimethylallyltransferase/geranyltranstransferase 0.16 CCNA_02839 glutamate-ammonia-ligase adenylyltransferase
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_02150 dimethylallyltransferase/geranyltranstransferase 0.16 CCNA_02839 glutamate-ammonia-ligase adenylyltransferase
Sinorhizobium meliloti 1021 0.30 SMc03884 geranyltranstransferase 0.19 SMc02368 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Magnetospirillum magneticum AMB-1 0.29 AMB_RS14610 polyprenyl synthetase family protein 0.20 AMB_RS13495 glutamine-synthetase adenylyltransferase
Dinoroseobacter shibae DFL-12 0.29 Dshi_3295 Polyprenyl synthetase (RefSeq) 0.15 Dshi_1775 (Glutamate--ammonia-ligase) adenylyltransferase (RefSeq) low > 64
Rhizobium sp. OAE497 0.29 ABIE40_RS18720 polyprenyl synthetase family protein 0.18 ABIE40_RS05710 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase low > 107
Phaeobacter inhibens DSM 17395 0.29 PGA1_c34160 geranyltranstransferase IspA 0.16 PGA1_c20010 glutamate-ammonia-ligase adenylyltransferase GlnE
Bosea sp. OAE506 0.28 ABIE41_RS08680 polyprenyl synthetase family protein 0.16 ABIE41_RS21430 bifunctional [glutamine synthetase] adenylyltransferase/[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase

Not shown: 11 genomes with orthologs for BPHYT_RS33580 only; 0 genomes with orthologs for BPHYT_RS03555 only