| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Agrobacterium fabrum C58 | 1.0 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | 1.0 | Atu2709 | | 3-isopropylmalate dehydratase, large subunit | 0.88 | 6 |
| Sinorhizobium meliloti 1021 | 0.92 | SMc02124 | | nitrite reductase | 0.88 | SMc03823 | | isopropylmalate isomerase large subunit | 0.95 | 7 |
| Rhizobium sp. OAE497 | 0.91 | ABIE40_RS09150 | | nitrite/sulfite reductase | 0.87 | ABIE40_RS18380 | | 3-isopropylmalate dehydratase large subunit | 0.95 | 2 |
| Sphingomonas koreensis DSMZ 15582 | 0.64 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | 0.63 | Ga0059261_4223 | | 3-isopropylmalate dehydratase, large subunit | 0.88 | 30 |
| Bosea sp. OAE506 | 0.63 | ABIE41_RS15335 | | nitrite/sulfite reductase | 0.79 | ABIE41_RS11660 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Dinoroseobacter shibae DFL-12 | 0.62 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | 0.65 | Dshi_0085 | | 3-isopropylmalate dehydratase, large subunit (RefSeq) | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.61 | A4249_RS09665 | | nitrite/sulfite reductase | 0.49 | A4249_RS10005 | | 3-isopropylmalate dehydratase large subunit | 0.99 | 16 |
| Azospirillum sp. SherDot2 | 0.61 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | 0.74 | MPMX19_01998 | | 3-isopropylmalate dehydratase large subunit | 0.87 | 25 |
| Caulobacter crescentus NA1000 Δfur | 0.60 | CCNA_01177 | | sulfite reductase, beta subunit | 0.66 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | low | > 67 |
| Caulobacter crescentus NA1000 | 0.60 | CCNA_01177 | | sulfite reductase, beta subunit | 0.66 | CCNA_00196 | | 3-isopropylmalate dehydratase large subunit | 0.89 | 37 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS10125 | | sulfite reductase | 0.73 | AZOBR_RS03545 | | isopropylmalate isomerase | 0.91 | 10 |
| Rhodopseudomonas palustris CGA009 | 0.60 | TX73_021840 | | nitrite/sulfite reductase | 0.76 | TX73_001245 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Rhodospirillum rubrum S1H | 0.60 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | 0.72 | Rru_A1189 | | 3-isopropylmalate dehydratase large subunit region (NCBI) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.58 | PGA1_c20760 | | putative nitrite/sulfite reductase | 0.69 | PGA1_c29780 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS15550 | | sulfite reductase | 0.66 | HSERO_RS16515 | | isopropylmalate isomerase | 0.92 | 2 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS25255 | | nitrite/sulfite reductase | 0.66 | QEN71_RS17605 | | 3-isopropylmalate dehydratase large subunit | 0.87 | 35 |
| Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.63 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | 0.60 | 34 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | 0.63 | Psyr_1983 | | 3-isopropylmalate dehydratase, large subunit | low | > 86 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_03470 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.64 | OH686_04480 | | 3-isopropylmalate dehydratase large subunit | 0.61 | 68 |
| Pseudomonas fluorescens GW456-L13 | 0.56 | PfGW456L13_3285 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.64 | PfGW456L13_3948 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 87 |
| Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS04725 | | sulfite reductase | 0.66 | BPHYT_RS33915 | | isopropylmalate isomerase | 0.86 | 6 |
| Dechlorosoma suillum PS | 0.55 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | 0.62 | Dsui_3201 | | 3-isopropylmalate dehydratase, large subunit | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.55 | RALBFv3_RS04600 | | sulfite reductase | 0.67 | RALBFv3_RS02620 | | 3-isopropylmalate dehydratase large subunit | low | > 76 |
| Ralstonia solanacearum UW163 | 0.55 | UW163_RS09070 | | sulfite reductase | 0.67 | UW163_RS11105 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.55 | Pf1N1B4_4656 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.64 | Pf1N1B4_15 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 87 |
| Ralstonia sp. UNC404CL21Col | 0.55 | ABZR87_RS00210 | | nitrite/sulfite reductase | 0.68 | ABZR87_RS14540 | | 3-isopropylmalate dehydratase large subunit | 0.83 | 18 |
| Ralstonia solanacearum GMI1000 | 0.55 | RS_RS12170 | | nitrite/sulfite reductase | 0.66 | RS_RS10000 | | 3-isopropylmalate dehydratase large subunit | 0.44 | 23 |
| Pseudomonas fluorescens FW300-N2E2 | 0.55 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.64 | Pf6N2E2_63 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.77 | 28 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_22865 | | sulfite reductase | 0.64 | AO353_20620 | | isopropylmalate isomerase | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_00555 | | sulfite reductase | 0.64 | AO356_21400 | | isopropylmalate isomerase | 0.89 | 8 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS16270 | | sulfite reductase | 0.67 | RR42_RS14400 | | isopropylmalate isomerase | 0.89 | 10 |
| Pseudomonas sp. RS175 | 0.55 | PFR28_01366 | | Sulfite reductase [ferredoxin] | 0.65 | PFR28_02824 | | 3-isopropylmalate dehydratase large subunit | 0.64 | 21 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | 0.65 | ABIE53_004801 | | 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit | 0.91 | 9 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | 0.66 | H281DRAFT_06075 | | 3-isopropylmalate dehydratase, large subunit | 0.68 | 9 |
| Ralstonia solanacearum PSI07 | 0.55 | RPSI07_RS12775 | | nitrite/sulfite reductase | 0.67 | RPSI07_RS14695 | | 3-isopropylmalate dehydratase large subunit | low | > 81 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.64 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.52 | 20 |
| Pseudomonas simiae WCS417 | 0.54 | PS417_12290 | | sulfite reductase | 0.63 | PS417_18600 | | isopropylmalate isomerase | 0.86 | 13 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS12980 | | nitrite/sulfite reductase | 0.64 | PFLU_RS20580 | | 3-isopropylmalate dehydratase large subunit | 0.50 | 22 |
| Pseudomonas putida KT2440 | 0.54 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.64 | PP_1985 | | 3-isopropylmalate dehydratase large subunit | 0.79 | 14 |
| Marinobacter adhaerens HP15 | 0.54 | HP15_1795 | | sulfite reductase hemoprotein, beta subunit | 0.65 | HP15_1834 | | protein containing 3-isopropylmalate dehydratase, large subunit region domain | 0.75 | 7 |
| Acinetobacter radioresistens SK82 | 0.53 | MPMX26_00614 | | Sulfite reductase [ferredoxin] | 0.64 | MPMX26_00345 | | 3-isopropylmalate dehydratase large subunit | low | > 36 |
| Pseudomonas stutzeri RCH2 | 0.53 | Psest_2089 | | Sulfite reductase, beta subunit (hemoprotein) | 0.63 | Psest_2591 | | 3-isopropylmalate dehydratase, large subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.49 | GFF4293 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.65 | GFF3363 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.87 | 6 |
| Acidovorax sp. GW101-3H11 | 0.49 | Ac3H11_577 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.64 | Ac3H11_1525 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | 0.82 | 14 |
| Variovorax sp. SCN45 | 0.48 | GFF1206 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | 0.66 | GFF3890 | | 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) | low | > 127 |
| Variovorax sp. OAS795 | 0.48 | ABID97_RS15380 | | nitrite/sulfite reductase | 0.65 | ABID97_RS08465 | | 3-isopropylmalate dehydratase large subunit | — | — |
| Synechococcus elongatus PCC 7942 | 0.14 | Synpcc7942_1240 | nirA | ferredoxin-nitrite reductase | 0.49 | Synpcc7942_1898 | leuC | isopropylmalate isomerase large subunit | — | — |
| Mycobacterium tuberculosis H37Rv | 0.13 | Rv2391 | | Ferredoxin-dependent sulfite reductase SirA | 0.59 | Rv2988c | | Probable 3-isopropylmalate dehydratase (large subunit) LeuC (isopropylmalate isomerase) (alpha-IPM isomerase) (IPMI) | — | — |
| Shewanella oneidensis MR-1 | 0.08 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.63 | SO4234 | leuC | 3-isopropylmalate dehydratase, large subunit (NCBI ptt file) | 0.94 | 24 |
| Shewanella sp. ANA-3 | 0.08 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.63 | Shewana3_3759 | | isopropylmalate isomerase large subunit (RefSeq) | 0.93 | 23 |
| Shewanella loihica PV-4 | 0.08 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | 0.63 | Shew_3470 | | isopropylmalate isomerase large subunit (RefSeq) | 0.92 | 10 |
| Vibrio cholerae E7946 ATCC 55056 | 0.07 | CSW01_02015 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.60 | CSW01_12605 | | 3-isopropylmalate dehydratase large subunit | low | > 62 |
| Castellaniella sp019104865 MT123 | 0.07 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.67 | ABCV34_RS04290 | | 3-isopropylmalate dehydratase large subunit | low | > 48 |
| Lysobacter sp. OAE881 | 0.07 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.52 | ABIE51_RS17575 | | 3-isopropylmalate dehydratase large subunit | 0.94 | 46 |
| Dickeya dianthicola 67-19 | 0.07 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.63 | HGI48_RS18065 | | 3-isopropylmalate dehydratase large subunit | 0.76 | 71 |
| Dickeya dianthicola ME23 | 0.07 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.63 | DZA65_RS19210 | | 3-isopropylmalate dehydratase large subunit | 0.70 | 32 |
| Klebsiella michiganensis M5al | 0.07 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.64 | BWI76_RS04670 | | 3-isopropylmalate dehydratase large subunit | 0.83 | 21 |
| Escherichia coli ECOR27 | 0.07 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | NOLOHH_03070 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 57 |
| Escherichia coli ECOR38 | 0.07 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | HEPCGN_08705 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | low | > 85 |
| Escherichia coli ECRC101 | 0.07 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | MCAODC_01240 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia fergusonii Becca | 0.07 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.64 | EFB2_03973 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
| Escherichia coli ECRC98 | 0.07 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | JDDGAC_14320 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC102 | 0.07 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | NIAGMN_08575 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC99 | 0.07 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | KEDOAH_17430 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC62 | 0.07 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | BNILDI_08540 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Escherichia coli ECRC101 | 0.07 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | OKFHMN_10725 | leuC1 | 3-isopropylmalate dehydratase large subunit 1 | — | — |
| Rahnella sp. WP5 | 0.07 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.63 | EX31_RS03690 | | 3-isopropylmalate dehydratase large subunit | 0.94 | 22 |
| Escherichia coli Nissle 1917 | 0.07 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | ECOLIN_RS00390 | | 3-isopropylmalate dehydratase large subunit | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.07 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | 0.64 | OHPLBJKB_03585 | | 3-isopropylmalate dehydratase large subunit | low | > 73 |
| Shewanella amazonensis SB2B | 0.06 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.61 | Sama_0337 | | isopropylmalate isomerase large subunit (RefSeq) | 0.94 | 30 |
| Serratia liquefaciens MT49 | 0.06 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.62 | IAI46_03345 | | 3-isopropylmalate dehydratase large subunit | low | > 86 |
| Pantoea sp. MT58 | 0.06 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.64 | IAI47_16010 | | 3-isopropylmalate dehydratase large subunit | 0.92 | 10 |
Not shown: 0 genomes with orthologs for Atu1456 only; 31 genomes with orthologs for Atu2709 only