| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS04235 | | heavy metal translocating P-type ATPase | 1.0 | ABZR87_RS01255 | | LysR substrate-binding domain-containing protein | 0.70 | 5 |
| Ralstonia solanacearum PSI07 | 0.83 | RPSI07_RS08310 | | copper-translocating P-type ATPase | 0.94 | RPSI07_RS11690 | | hydrogen peroxide-inducible genes activator | 0.47 | 54 |
| Ralstonia solanacearum UW163 | 0.83 | UW163_RS04650 | | copper-translocating P-type ATPase | 0.94 | UW163_RS08020 | | hydrogen peroxide-inducible genes activator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.83 | RALBFv3_RS08960 | | copper-translocating P-type ATPase | 0.94 | RALBFv3_RS05605 | | hydrogen peroxide-inducible genes activator | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.83 | RS_RS16775 | | copper-translocating P-type ATPase | 0.95 | RS_RS13470 | | hydrogen peroxide-inducible genes activator | 0.62 | 17 |
| Acidovorax sp. GW101-3H11 | 0.58 | Ac3H11_4218 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.67 | Ac3H11_784 | | Hydrogen peroxide-inducible genes activator | 0.47 | 11 |
| Herbaspirillum seropedicae SmR1 | 0.57 | HSERO_RS08020 | | heavy metal translocating P-type ATPase | 0.72 | HSERO_RS18935 | | LysR family transcriptional regulator | low | > 78 |
| Paraburkholderia sabiae LMG 24235 | 0.57 | QEN71_RS17330 | | heavy metal translocating P-type ATPase | 0.80 | QEN71_RS26625 | | LysR substrate-binding domain-containing protein | low | > 153 |
| Pseudomonas fluorescens FW300-N2E2 | 0.56 | Pf6N2E2_3487 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.49 | Pf6N2E2_4353 | | Hydrogen peroxide-inducible genes activator | low | > 103 |
| Pseudomonas sp. RS175 | 0.56 | PFR28_05244 | | Copper-exporting P-type ATPase | 0.48 | PFR28_04434 | | Hydrogen peroxide-inducible genes activator | low | > 88 |
| Pseudomonas sp. S08-1 | 0.56 | OH686_07395 | | copper-translocating P-type ATPase | 0.49 | OH686_13510 | | Hydrogen peroxide-inducible genes activator | low | > 80 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.55 | H281DRAFT_03512 | | Cu+-exporting ATPase | 0.80 | H281DRAFT_04673 | | transcriptional regulator, LysR family | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.55 | AO356_08065 | | copper-transporting ATPase | 0.48 | AO356_12385 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_06155 | | copper-transporting ATPase | 0.47 | AO353_09315 | | LysR family transcriptional regulator | low | > 101 |
| Cupriavidus basilensis FW507-4G11 | 0.55 | RR42_RS20305 | | metal ABC transporter ATPase | 0.85 | RR42_RS17385 | | LysR family transcriptional regulator | low | > 128 |
| Pseudomonas simiae WCS417 | 0.55 | PS417_03160 | | metal ABC transporter ATPase | 0.48 | PS417_27865 | | LysR family transcriptional regulator | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.55 | PfGW456L13_24 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.48 | PfGW456L13_773 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Pseudomonas syringae pv. syringae B728a | 0.55 | Psyr_0654 | | Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase | 0.50 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.55 | Psyr_0654 | | Copper-translocating P-type ATPase:Heavy metal translocating P-type ATPase | 0.50 | Psyr_0202 | | transcriptional regulator, LysR family | low | > 86 |
| Paraburkholderia graminis OAS925 | 0.55 | ABIE53_004745 | | Cu+-exporting ATPase | 0.79 | ABIE53_000834 | | LysR family hydrogen peroxide-inducible transcriptional activator | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.55 | BPHYT_RS34125 | | heavy metal translocating P-type ATPase | 0.80 | BPHYT_RS03470 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas putida KT2440 | 0.54 | PP_0586 | | cadmium translocating P-type ATPase | 0.49 | PP_5309 | | oxidative and nitrosative stress transcriptional dual regulator | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.54 | PFLU_RS03240 | | copper-translocating P-type ATPase | 0.48 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.54 | PFLU_RS03240 | | copper-translocating P-type ATPase | 0.48 | PFLU_RS29545 | | hydrogen peroxide-inducible genes activator | low | > 109 |
| Lysobacter sp. OAE881 | 0.54 | ABIE51_RS09555 | | heavy metal translocating P-type ATPase | 0.33 | ABIE51_RS05475 | | LysR substrate-binding domain-containing protein | low | > 62 |
| Pseudomonas stutzeri RCH2 | 0.54 | Psest_0738 | | copper-(or silver)-translocating P-type ATPase | 0.49 | Psest_4191 | | Transcriptional regulator | low | > 67 |
| Pseudomonas fluorescens FW300-N1B4 | 0.54 | Pf1N1B4_1262 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.48 | Pf1N1B4_2106 | | Hydrogen peroxide-inducible genes activator | low | > 87 |
| Rhodanobacter denitrificans MT42 | 0.53 | LRK55_RS18700 | | heavy metal translocating P-type ATPase | 0.34 | LRK55_RS04545 | | LysR substrate-binding domain-containing protein | low | > 63 |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_04397 | | Copper-exporting P-type ATPase | 0.32 | MPMX19_05834 | | Hydrogen peroxide-inducible genes activator | low | > 112 |
| Variovorax sp. OAS795 | 0.52 | ABID97_RS02825 | | heavy metal translocating P-type ATPase | 0.67 | ABID97_RS01570 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Variovorax sp. SCN45 | 0.52 | GFF3317 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.67 | GFF5549 | | Hydrogen peroxide-inducible genes activator => OxyR | low | > 127 |
| Dechlorosoma suillum PS | 0.52 | Dsui_1065 | | copper/silver-translocating P-type ATPase | 0.53 | Dsui_0823 | | transcriptional regulator | low | > 51 |
| Shewanella amazonensis SB2B | 0.51 | Sama_1786 | | copper-translocating P-type ATPase (RefSeq) | 0.23 | Sama_0860 | | LysR family transcriptional regulator (RefSeq) | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.51 | GFF2052 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.66 | GFF2803 | | Hydrogen peroxide-inducible genes activator | low | > 90 |
| Rhodospirillum rubrum S1H | 0.45 | Rru_A1894 | | heavy metal translocating P-type ATPase (NCBI) | 0.33 | Rru_A2782 | | Transcriptional Regulator, LysR family (NCBI) | low | > 58 |
| Magnetospirillum magneticum AMB-1 | 0.43 | AMB_RS09145 | | copper-translocating P-type ATPase | 0.30 | AMB_RS03045 | | hydrogen peroxide-inducible genes activator | — | — |
| Serratia liquefaciens MT49 | 0.39 | IAI46_13395 | | copper-translocating P-type ATPase | 0.32 | IAI46_24475 | | DNA-binding transcriptional regulator OxyR | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.38 | MPMX26_01948 | | Copper-transporting P-type ATPase | 0.23 | MPMX26_02334 | | Hydrogen peroxide-inducible genes activator | low | > 36 |
| Marinobacter adhaerens HP15 | 0.38 | HP15_3546 | | copper-translocating P-type ATPase | 0.49 | HP15_308 | | oxidative stress regulatory protein OxyR | low | > 73 |
| Agrobacterium fabrum C58 | 0.38 | Atu1195 | | heavy-metal transporting P-type ATPase | 0.29 | Atu4641 | | LysR family transcriptional regulator | low | > 89 |
| Kangiella aquimarina DSM 16071 | 0.38 | B158DRAFT_1616 | | copper-(or silver)-translocating P-type ATPase | 0.45 | B158DRAFT_0567 | | Transcriptional regulator | low | > 40 |
| Sinorhizobium meliloti 1021 | 0.37 | SMa1013 | | ATPase P | 0.28 | SMc00818 | | hydrogen peroxide-inducible genes activator (morphology and AUTO-aggregation control protein) | low | > 103 |
| Bacteroides stercoris CC31F | 0.37 | HMPREF1181_RS09430 | | heavy metal translocating P-type ATPase | 0.29 | HMPREF1181_RS02160 | | hydrogen peroxide-inducible genes activator | 0.61 | 20 |
| Shewanella loihica PV-4 | 0.37 | Shew_3818 | | copper-translocating P-type ATPase (RefSeq) | 0.23 | Shew_1035 | | LysR family transcriptional regulator (RefSeq) | low | > 60 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | 0.37 | CA264_21425 | | copper-translocating P-type ATPase | 0.31 | CA264_13765 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF4248 | | Lead, cadmium, zinc and mercury transporting ATPase (EC 3.6.3.3) (EC 3.6.3.5); Copper-translocating P-type ATPase (EC 3.6.3.4) | 0.34 | GFF2347 | | Hydrogen peroxide-inducible genes activator | low | > 78 |
| Shewanella sp. ANA-3 | 0.36 | Shewana3_4145 | | copper-translocating P-type ATPase (RefSeq) | 0.25 | Shewana3_3046 | | LysR family transcriptional regulator (RefSeq) | low | > 73 |
| Alteromonas macleodii MIT1002 | 0.36 | MIT1002_00284 | | Copper-exporting P-type ATPase A | 0.21 | MIT1002_00881 | | Morphology and auto-aggregation control protein | low | > 70 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.36 | Echvi_4125 | | copper-(or silver)-translocating P-type ATPase | 0.30 | Echvi_1045 | | Transcriptional regulator | low | > 79 |
| Sphingomonas koreensis DSMZ 15582 | 0.36 | Ga0059261_1162 | | copper-(or silver)-translocating P-type ATPase | 0.30 | Ga0059261_0159 | | Transcriptional regulator | low | > 68 |
| Pantoea sp. MT58 | 0.36 | IAI47_14400 | | copper-exporting P-type ATPase CopA | 0.32 | IAI47_00930 | | DNA-binding transcriptional regulator OxyR | low | > 76 |
| Bosea sp. OAE506 | 0.36 | ABIE41_RS14220 | | heavy metal translocating P-type ATPase | 0.27 | ABIE41_RS01195 | | hydrogen peroxide-inducible genes activator | low | > 77 |
| Parabacteroides merdae CL09T00C40 | 0.36 | HMPREF1078_RS01895 | | heavy metal translocating P-type ATPase | 0.29 | HMPREF1078_RS01140 | | hydrogen peroxide-inducible genes activator | low | > 61 |
| Phaeobacter inhibens DSM 17395 | 0.36 | PGA1_c02520 | | copper-transporting P-type ATPase ActP | 0.29 | PGA1_78p00040 | | hydrogen peroxide-inducible genes activator OxyR | — | — |
| Dinoroseobacter shibae DFL-12 | 0.35 | Dshi_1259 | | heavy metal translocating P-type ATPase (RefSeq) | 0.27 | Dshi_3802 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Castellaniella sp019104865 MT123 | 0.35 | ABCV34_RS04200 | | heavy metal translocating P-type ATPase | 0.67 | ABCV34_RS03575 | | LysR substrate-binding domain-containing protein | low | > 48 |
| Enterobacter asburiae PDN3 | 0.35 | EX28DRAFT_2474 | | copper-(or silver)-translocating P-type ATPase | 0.33 | EX28DRAFT_4424 | | Transcriptional regulator | — | — |
| Vibrio cholerae E7946 ATCC 55056 | 0.35 | CSW01_11300 | | copper-exporting P-type ATPase A | 0.35 | CSW01_13340 | | DNA-binding transcriptional regulator OxyR | low | > 62 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.35 | BT1091 | | cation-transporting ATPase pacS (NCBI ptt file) | 0.29 | BT4716 | | redox-sensitive transcriptional activator (NCBI ptt file) | low | > 81 |
| Escherichia coli ECOR38 | 0.35 | HEPCGN_06710 | copA | copper-exporting P-type ATPase CopA | 0.33 | HEPCGN_12210 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 87 |
| Pectobacterium carotovorum WPP14 | 0.35 | HER17_RS15625 | | copper-exporting P-type ATPase CopA | 0.33 | HER17_RS00955 | | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_01084 | | Copper-exporting P-type ATPase | 0.33 | MPMX20_04519 | | Hydrogen peroxide-inducible genes activator | low | > 85 |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS06905 | | Cu+ exporting ATPase | 0.34 | BWI76_RS00865 | | DNA-binding transcriptional regulator OxyR | low | > 92 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.34 | OHPLBJKB_03190 | | Copper-exporting P-type ATPase | 0.33 | OHPLBJKB_04089 | | Hydrogen peroxide-inducible genes activator | low | > 73 |
| Escherichia fergusonii Becca | 0.34 | EFB2_03575 | | Copper-exporting P-type ATPase | 0.33 | EFB2_04651 | | Hydrogen peroxide-inducible genes activator | low | > 86 |
| Escherichia coli ECRC62 | 0.34 | BNILDI_22435 | copA | copper-exporting P-type ATPase CopA | 0.33 | BNILDI_05825 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Escherichia coli ECRC98 | 0.34 | JDDGAC_11720 | copA | copper-exporting P-type ATPase CopA | 0.33 | JDDGAC_17190 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 86 |
| Escherichia coli ECRC99 | 0.34 | KEDOAH_19895 | copA | copper-exporting P-type ATPase CopA | 0.33 | KEDOAH_14595 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC100 | 0.34 | OKFHMN_08075 | copA | copper-exporting P-type ATPase CopA | 0.33 | OKFHMN_13565 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 80 |
| Escherichia coli ECRC102 | 0.34 | NIAGMN_06125 | copA | copper-exporting P-type ATPase CopA | 0.33 | NIAGMN_11315 | oxyR | DNA-binding transcriptional regulator OxyR | — | — |
| Escherichia coli ECRC101 | 0.34 | MCAODC_27295 | copA | copper-exporting P-type ATPase CopA | 0.33 | MCAODC_04065 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 87 |
| Escherichia coli Nissle 1917 | 0.34 | ECOLIN_RS02865 | | copper-exporting P-type ATPase CopA | 0.33 | ECOLIN_RS22870 | | DNA-binding transcriptional regulator OxyR | low | > 55 |
| Escherichia coli BW25113 | 0.34 | b0484 | copA | copper transporter (NCBI) | 0.33 | b3961 | oxyR | DNA-binding transcriptional dual regulator (NCBI) | low | > 76 |
| Phocaeicola dorei CL03T12C01 | 0.34 | ABI39_RS15120 | | copper-translocating P-type ATPase | 0.29 | ABI39_RS06075 | | hydrogen peroxide-inducible genes activator | low | > 72 |
| Escherichia coli BL21 | 0.34 | ECD_00435 | | copper transporter | 0.33 | ECD_03846 | | oxidative and nitrosative stress transcriptional regulator | low | > 61 |
| Dyella japonica UNC79MFTsu3.2 | 0.34 | ABZR86_RS01750 | | heavy metal translocating P-type ATPase | 0.33 | ABZR86_RS19355 | | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Rahnella sp. WP5 | 0.34 | EX31_RS22575 | | copper-exporting P-type ATPase CopA | 0.33 | EX31_RS14170 | | DNA-binding transcriptional regulator OxyR | low | > 89 |
| Bacteroides ovatus ATCC 8483 | 0.34 | BACOVA_04047 | | copper-exporting ATPase | 0.29 | BACOVA_05567 | | LysR substrate binding domain protein | low | > 94 |
| Escherichia coli ECOR27 | 0.34 | NOLOHH_01015 | copA | copper-exporting P-type ATPase CopA | 0.33 | NOLOHH_05700 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 75 |
| Shewanella oneidensis MR-1 | 0.34 | SO1689 | | cation transport ATPase, E1-E2 family (NCBI ptt file) | 0.26 | SO1328 | | transcriptional regulator, LysR family (NCBI ptt file) | low | > 76 |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.33 | A4249_RS03270 | | heavy metal translocating P-type ATPase | 0.24 | A4249_RS12755 | | hydrogen peroxide-inducible genes activator | low | > 48 |
| Erwinia tracheiphila SCR3 | 0.32 | LU632_RS15300 | copA | copper-exporting P-type ATPase CopA | 0.33 | LU632_RS19590 | oxyR | DNA-binding transcriptional regulator OxyR | low | > 74 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.29 | ABZR88_RS09650 | | cation-translocating P-type ATPase | 0.32 | ABZR88_RS18535 | | hydrogen peroxide-inducible genes activator | low | > 71 |
Not shown: 8 genomes with orthologs for ABZR87_RS04235 only; 12 genomes with orthologs for ABZR87_RS01255 only