Conservation of cofitness between b1941 and b1887 in Escherichia coli BW25113

75 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b1941 fliI flagellum-specific ATP synthase (NCBI) 1.0 b1887 cheW purine-binding chemotaxis protein (NCBI) 0.58 12
Escherichia coli ECRC62 1.00 BNILDI_15120 fliI flagellum-specific ATP synthase FliI 1.00 BNILDI_15355 cheW chemotaxis protein CheW — —
Escherichia coli ECRC101 1.00 OKFHMN_25700 fliI flagellum-specific ATP synthase FliI 1.00 OKFHMN_26125 cheW chemotaxis protein CheW — —
Escherichia coli ECRC98 1.00 JDDGAC_00285 fliI flagellum-specific ATP synthase FliI 1.00 JDDGAC_00700 cheW chemotaxis protein CheW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01788 Flagellum-specific ATP synthase 1.00 OHPLBJKB_01841 Chemotaxis protein CheW low > 73
Escherichia coli ECRC99 1.00 KEDOAH_02395 fliI flagellum-specific ATP synthase FliI 1.00 KEDOAH_01980 cheW chemotaxis protein CheW — —
Escherichia coli ECRC102 1.00 NIAGMN_02355 fliI flagellum-specific ATP synthase FliI 1.00 NIAGMN_01935 cheW chemotaxis protein CheW — —
Escherichia coli ECRC101 1.00 MCAODC_19695 fliI flagellum-specific ATP synthase FliI 1.00 MCAODC_19280 cheW chemotaxis protein CheW — —
Escherichia coli ECOR27 1.00 NOLOHH_16330 fliI flagellum-specific ATP synthase FliI 1.00 NOLOHH_16565 cheW chemotaxis protein CheW low > 57
Escherichia coli Nissle 1917 1.00 ECOLIN_RS11075 flagellar protein export ATPase FliI 1.00 ECOLIN_RS10775 chemotaxis protein CheW — —
Escherichia fergusonii Becca 1.00 EFB2_02005 Flagellum-specific ATP synthase 1.00 EFB2_02056 Chemotaxis protein CheW low > 86
Escherichia coli ECOR38 0.99 HEPCGN_04060 fliI flagellum-specific ATP synthase FliI 1.00 HEPCGN_04545 cheW chemotaxis protein CheW low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF4015 Flagellum-specific ATP synthase FliI 0.93 GFF1668 Positive regulator of CheA protein activity (CheW) low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_02938 Flagellum-specific ATP synthase 0.93 MPMX20_02797 Chemotaxis protein CheW 0.78 37
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0613 flagellar protein export ATPase FliI 0.94 EX28DRAFT_0663 Chemotaxis signal transduction protein low > 76
Pectobacterium carotovorum WPP14 0.85 HER17_RS08265 flagellum-specific ATP synthase FliI 0.85 HER17_RS08105 chemotaxis protein CheW low > 75
Pantoea sp. MT58 0.84 IAI47_08015 flagellum-specific ATP synthase FliI 0.82 IAI47_08305 chemotaxis protein CheW low > 76
Erwinia tracheiphila SCR3 0.83 LU632_RS10560 fliI flagellum-specific ATP synthase FliI 0.84 LU632_RS13555 cheW chemotaxis protein CheW 0.38 66
Dickeya dadantii 3937 0.81 DDA3937_RS13380 flagellum-specific ATP synthase FliI 0.87 DDA3937_RS13540 chemotaxis protein CheW 0.90 37
Dickeya dianthicola 67-19 0.81 HGI48_RS13425 flagellum-specific ATP synthase FliI 0.87 HGI48_RS13585 chemotaxis protein CheW low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS13910 flagellum-specific ATP synthase FliI 0.87 DZA65_RS14070 chemotaxis protein CheW 0.95 40
Serratia liquefaciens MT49 0.79 IAI46_15855 flagellum-specific ATP synthase FliI 0.85 IAI46_16035 chemotaxis protein CheW low > 86
Rahnella sp. WP5 0.79 EX31_RS09555 flagellum-specific ATP synthase FliI 0.82 EX31_RS11400 chemotaxis protein CheW 0.51 40
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS28810 flagellar protein export ATPase FliI 0.65 QEN71_RS29005 chemotaxis protein CheW 0.93 55
Paraburkholderia graminis OAS925 0.66 ABIE53_000077 flagellum-specific ATP synthase 0.66 ABIE53_000124 purine-binding chemotaxis protein CheW low > 113
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05783 flagellum-specific ATP synthase 0.66 H281DRAFT_05743 CheW protein low > 103
Burkholderia phytofirmans PsJN 0.66 BPHYT_RS18790 ATP synthase 0.66 BPHYT_RS18995 purine-binding chemotaxis protein 0.57 44
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS23555 ATP synthase 0.68 RR42_RS35800 chemotaxis protein CheW 0.37 39
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS10295 ATP synthase 0.61 HSERO_RS14950 purine-binding chemotaxis protein 0.65 55
Variovorax sp. SCN45 0.63 GFF5747 Flagellum-specific ATP synthase FliI 0.60 GFF5730 Positive regulator of CheA protein activity (CheW) — —
Castellaniella sp019104865 MT123 0.62 ABCV34_RS05660 flagellar protein export ATPase FliI 0.54 ABCV34_RS05830 chemotaxis protein CheW 0.74 29
Dechlorosoma suillum PS 0.61 Dsui_1753 flagellar protein export ATPase FliI 0.58 Dsui_1709 chemotaxis signal transduction protein low > 51
Ralstonia solanacearum PSI07 0.60 RPSI07_RS01550 flagellum-specific ATP synthase FliI 0.65 RPSI07_RS06250 chemotaxis protein CheW low > 81
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS22065 flagellar protein export ATPase FliI 0.64 ABZR87_RS17965 chemotaxis protein CheW low > 80
Ralstonia solanacearum IBSBF1503 0.59 RALBFv3_RS21575 flagellum-specific ATP synthase FliI 0.65 RALBFv3_RS17395 chemotaxis protein CheW low > 76
Ralstonia solanacearum UW163 0.59 UW163_RS17615 flagellum-specific ATP synthase FliI 0.65 UW163_RS21755 chemotaxis protein CheW — —
Ralstonia solanacearum GMI1000 0.59 RS_RS19050 flagellum-specific ATP synthase FliI 0.65 RS_RS23915 chemotaxis protein CheW low > 80
Acidovorax sp. GW101-3H11 0.57 Ac3H11_1407 Flagellum-specific ATP synthase FliI 0.55 Ac3H11_1422 Positive regulator of CheA protein activity (CheW) low > 79
Dyella japonica UNC79MFTsu3.2 0.57 ABZR86_RS20185 flagellar protein export ATPase FliI 0.36 ABZR86_RS22225 chemotaxis protein CheW low > 74
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3454 ATPase FliI/YscN 0.31 Psyr_3428 CheW-like protein 0.64 32
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3454 ATPase FliI/YscN 0.31 Psyr_3428 CheW-like protein low > 86
Marinobacter adhaerens HP15 0.57 HP15_2323 flagellum-specific ATP synthase FliI 0.30 HP15_2292 purine-binding chemotaxis protein CheW low > 73
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_18695 flagellar protein export ATPase FliI 0.29 AO353_18830 chemotaxis protein CheW 0.65 37
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS21760 flagellar protein export ATPase FliI 0.30 PFLU_RS24980 purine-binding chemotaxis protein CheW low > 109
Rhodanobacter denitrificans MT42 0.56 LRK55_RS13250 flagellar protein export ATPase FliI 0.40 LRK55_RS13390 chemotaxis protein CheW low > 63
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_2590 Flagellum-specific ATP synthase FliI 0.35 Pf6N2E2_1778 Positive regulator of CheA protein activity (CheW) low > 103
Pseudomonas fluorescens SBW25 0.56 PFLU_RS21760 flagellar protein export ATPase FliI 0.30 PFLU_RS24980 purine-binding chemotaxis protein CheW low > 109
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_4350 Flagellum-specific ATP synthase FliI 0.29 PfGW456L13_4321 Positive regulator of CheA protein activity (CheW) low > 87
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_03820 flagellar protein export ATPase FliI 0.34 AO356_29855 hypothetical protein low > 104
Rhodanobacter denitrificans FW104-10B01 0.56 LRK54_RS13510 flagellar protein export ATPase FliI 0.40 LRK54_RS13650 chemotaxis protein CheW low > 59
Rhodanobacter sp. FW510-T8 0.56 OKGIIK_02760 fliI flagellar protein export ATPase FliI 0.41 OKGIIK_02895 Chemotaxis protein CheW low > 52
Pseudomonas sp. RS175 0.56 PFR28_00835 Flagellum-specific ATP synthase 0.32 PFR28_01431 Chemotaxis protein CheW low > 88
Pseudomonas simiae WCS417 0.56 PS417_19790 ATP synthase 0.29 PS417_19650 chemotaxis protein CheW 0.83 27
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_3607 Flagellum-specific ATP synthase FliI 0.29 Pf1N1B4_3635 Positive regulator of CheA protein activity (CheW) — —
Shewanella amazonensis SB2B 0.55 Sama_2294 fliI flagellum-specific ATP synthase (RefSeq) 0.38 Sama_3496 biotin synthase (RefSeq) low > 62
Shewanella sp. ANA-3 0.55 Shewana3_1345 fliI flagellum-specific ATP synthase (RefSeq) 0.54 Shewana3_2217 CheW protein (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.55 MIT1002_01088 Flagellum-specific ATP synthase 0.30 MIT1002_01110 Chemotaxis protein CheW low > 70
Shewanella loihica PV-4 0.55 Shew_1369 fliI flagellum-specific ATP synthase (RefSeq) 0.44 Shew_0112 CheW protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.55 SO3225 fliI flagellum-specific ATP synthase FliI (NCBI ptt file) 0.52 SO2122 cheW-1 purine-binding chemotaxis protein CheW (NCBI ptt file) low > 76
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF1454 Flagellum-specific ATP synthase FliI 0.56 GFF2450 Positive regulator of CheA protein activity (CheW) low > 90
Pseudomonas stutzeri RCH2 0.55 Psest_1722 flagellar protein export ATPase FliI 0.30 Psest_1749 Chemotaxis signal transduction protein 0.73 36
Pseudomonas putida KT2440 0.55 PP_4366 flagellum-specific ATP synthase 0.30 PP_4332 Chemotaxis protein CheW 0.55 40
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_10635 flagellum-specific ATP synthase FliI 0.36 CSW01_19540 chemotaxis protein CheW low > 62
Pseudomonas sp. S08-1 0.54 OH686_02820 flagellar protein export ATPase FliI 0.27 OH686_02685 Positive regulator of CheA protein activity (CheW) 0.76 67
Lysobacter sp. OAE881 0.52 ABIE51_RS16795 flagellar protein export ATPase FliI 0.51 ABIE51_RS16920 chemotaxis protein CheW low > 62
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.2812.1 Flagellum-specific ATP synthase FliI 0.52 Xcc-8004.2882.1 Positive regulator of CheA protein activity (CheW) low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.42 DVU0310 fliI flagellum-specific ATP synthase FliI (TIGR) 0.32 DVU1904 cheW-2 chemotaxis protein CheW (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.42 DvMF_2290 flagellar protein export ATPase FliI (RefSeq) 0.33 DvMF_0284 CheW protein (RefSeq) — —
Azospirillum sp. SherDot2 0.41 MPMX19_05679 Flagellum-specific ATP synthase 0.38 MPMX19_01949 Chemotaxis protein CheW low > 112
Azospirillum brasilense Sp245 0.41 AZOBR_RS20120 ATP synthase 0.39 AZOBR_RS14240 chemotaxis protein CheW low > 97
Magnetospirillum magneticum AMB-1 0.39 AMB_RS03235 flagellum-specific ATP synthase FliI 0.22 AMB_RS01645 chemotaxis protein CheW low > 64
Rhodopseudomonas palustris CGA009 0.36 TX73_008390 flagellar protein export ATPase FliI 0.22 TX73_000720 chemotaxis protein CheW low > 86
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_03135 flagellum-specific ATP synthase fliL 0.32 CCNA_00443 chemotaxis protein cheW low > 67
Caulobacter crescentus NA1000 0.35 CCNA_03135 flagellum-specific ATP synthase fliL 0.32 CCNA_00443 chemotaxis protein cheW low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.34 A4249_RS10290 flagellar protein export ATPase FliI 0.32 A4249_RS15570 chemotaxis protein CheW low > 48
Phaeobacter inhibens DSM 17395 0.32 PGA1_c35840 flagellum-specific ATP synthase FliI 0.25 PGA1_262p02110 putative chemotaxis protein CheW low > 62

Not shown: 4 genomes with orthologs for b1941 only; 6 genomes with orthologs for b1887 only