Conservation of cofitness between b4005 and b0907 in Escherichia coli BW25113

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 1.0 b0907 serC phosphoserine aminotransferase (NCBI) 0.84 16
Escherichia coli ECOR27 0.99 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 1.00 NOLOHH_22050 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 1.00 OHPLBJKB_02761 Phosphoserine aminotransferase — —
Escherichia coli ECRC62 0.99 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 1.00 BNILDI_20305 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli BL21 0.98 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 1.00 ECD_00911 3-phosphoserine/phosphohydroxythreonine aminotransferase low > 60
Escherichia coli ECRC102 0.98 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 1.00 NIAGMN_03210 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECOR38 0.98 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.99 HEPCGN_23030 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 85
Escherichia coli Nissle 1917 0.98 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.99 ECOLIN_RS04805 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Escherichia fergusonii Becca 0.98 EFB2_04605 Phosphoribosylamine--glycine ligase 0.99 EFB2_03157 Phosphoserine aminotransferase low > 86
Escherichia coli ECRC101 0.98 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 1.00 OKFHMN_05490 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC101 0.98 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 1.00 MCAODC_24880 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC99 0.98 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 1.00 KEDOAH_22245 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Escherichia coli ECRC98 0.98 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 1.00 JDDGAC_09100 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.92 GFF3664 Phosphoserine aminotransferase (EC 2.6.1.52) low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.89 BWI76_RS09755 phosphoserine transaminase 0.77 34
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.91 EX28DRAFT_2028 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Enterobacter sp. TBS_079 0.92 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.93 MPMX20_01566 Phosphoserine aminotransferase 0.86 29
Pantoea sp. MT58 0.84 IAI47_18045 phosphoribosylamine--glycine ligase 0.82 IAI47_12865 3-phosphoserine/phosphohydroxythreonine transaminase 0.72 66
Dickeya dadantii 3937 0.83 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.81 DDA3937_RS09670 3-phosphoserine/phosphohydroxythreonine transaminase 0.65 72
Dickeya dianthicola 67-19 0.83 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.80 HGI48_RS09680 3-phosphoserine/phosphohydroxythreonine transaminase — —
Dickeya dianthicola ME23 0.83 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.79 DZA65_RS09990 3-phosphoserine/phosphohydroxythreonine transaminase low > 75
Rahnella sp. WP5 0.82 EX31_RS16855 phosphoribosylamine--glycine ligase 0.79 EX31_RS18255 3-phosphoserine/phosphohydroxythreonine transaminase low > 89
Pectobacterium carotovorum WPP14 0.82 HER17_RS20340 phosphoribosylamine--glycine ligase 0.80 HER17_RS12290 3-phosphoserine/phosphohydroxythreonine transaminase — —
Erwinia tracheiphila SCR3 0.81 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.81 LU632_RS09790 serC 3-phosphoserine/phosphohydroxythreonine transaminase — —
Serratia liquefaciens MT49 0.81 IAI46_01360 phosphoribosylamine--glycine ligase 0.79 IAI46_08635 3-phosphoserine/phosphohydroxythreonine transaminase 0.48 55
Vibrio cholerae E7946 ATCC 55056 0.79 CSW01_01415 phosphoribosylamine--glycine ligase 0.66 CSW01_05875 3-phosphoserine/phosphohydroxythreonine transaminase — —
Marinobacter adhaerens HP15 0.75 HP15_3228 phosphoribosylamine-glycine ligase 0.52 HP15_1361 phosphoserine aminotransferase — —
Pseudomonas putida KT2440 0.74 PP_4823 Phosphoribosylamine--glycine ligase 0.56 PP_1768 phosphoserine aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_08230 phosphoribosylamine--glycine ligase 0.55 AO356_03470 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3520 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.55 Pf6N2E2_2521 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas sp. RS175 0.73 PFR28_05213 Phosphoribosylamine--glycine ligase 0.56 PFR28_00906 Phosphoserine aminotransferase — —
Pseudomonas fluorescens SBW25 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS03010 phosphoribosylamine--glycine ligase 0.55 PFLU_RS08090 3-phosphoserine/phosphohydroxythreonine transaminase — —
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_13645 phosphoribosylamine--glycine ligase 0.56 AO353_02075 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.55 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_4407 phosphoribosylamine--glycine ligase 0.55 Psyr_3646 phosphoserine aminotransferase apoenzyme — —
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1316 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.44 Pf1N1B4_351 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas stutzeri RCH2 0.73 Psest_1013 phosphoribosylamine--glycine ligase 0.57 Psest_1983 phosphoserine aminotransferase — —
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_58 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.56 PfGW456L13_2175 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Pseudomonas sp. S08-1 0.72 OH686_07625 Phosphoribosylamine--glycine ligase 0.55 OH686_20865 phosphoserine transaminase — —
Alteromonas macleodii MIT1002 0.72 MIT1002_03961 Phosphoribosylamine--glycine ligase 0.59 MIT1002_02192 Phosphoserine aminotransferase — —
Pseudomonas simiae WCS417 0.72 PS417_02935 phosphoribosylamine--glycine ligase 0.55 PS417_08120 MFS transporter — —
Kangiella aquimarina DSM 16071 0.71 B158DRAFT_0167 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.51 B158DRAFT_2322 phosphoserine aminotransferase apoenzyme (EC 2.6.1.52) — —
Shewanella amazonensis SB2B 0.71 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.56 Sama_1732 phosphoserine aminotransferase (RefSeq) — —
Shewanella sp. ANA-3 0.70 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.58 Shewana3_1973 phosphoserine aminotransferase (RefSeq) — —
Shewanella oneidensis MR-1 0.68 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.56 SO2410 serC phosphoserine aminotransferase (NCBI ptt file) — —
Shewanella loihica PV-4 0.67 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.56 Shew_1950 phosphoserine aminotransferase (RefSeq) — —
Xanthomonas campestris pv. campestris strain 8004 0.66 Xcc-8004.657.1 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.48 Xcc-8004.3283.1 Phosphoserine aminotransferase (EC 2.6.1.52) 0.85 6
Dyella japonica UNC79MFTsu3.2 0.64 ABZR86_RS13850 phosphoribosylamine--glycine ligase 0.52 ABZR86_RS02220 3-phosphoserine/phosphohydroxythreonine transaminase 0.95 23
Acinetobacter radioresistens SK82 0.64 MPMX26_01140 Phosphoribosylamine--glycine ligase 0.56 MPMX26_02219 Phosphoserine aminotransferase — —
Rhodanobacter denitrificans FW104-10B01 0.63 LRK54_RS10165 phosphoribosylamine--glycine ligase 0.52 LRK54_RS00400 3-phosphoserine/phosphohydroxythreonine transaminase 0.61 39
Rhodanobacter denitrificans MT42 0.63 LRK55_RS09805 phosphoribosylamine--glycine ligase 0.52 LRK55_RS00140 3-phosphoserine/phosphohydroxythreonine transaminase low > 63
Lysobacter sp. OAE881 0.63 ABIE51_RS17770 phosphoribosylamine--glycine ligase 0.54 ABIE51_RS12150 3-phosphoserine/phosphohydroxythreonine transaminase low > 62
Rhodanobacter sp. FW510-T8 0.62 OKGIIK_13750 purD phosphoribosylamine--glycine ligase 0.52 OKGIIK_06910 serC 3-phosphoserine/phosphohydroxythreonine transaminase low > 52
Dechlorosoma suillum PS 0.62 Dsui_1596 phosphoribosylamine--glycine ligase 0.54 Dsui_1939 phosphoserine aminotransferase — —
Herbaspirillum seropedicae SmR1 0.60 HSERO_RS17755 phosphoribosylamine--glycine ligase 0.55 HSERO_RS18435 MFS transporter — —
Paraburkholderia bryophila 376MFSha3.1 0.59 H281DRAFT_04521 phosphoribosylamine--glycine ligase 0.55 H281DRAFT_03926 phosphoserine aminotransferase apoenzyme — —
Paraburkholderia graminis OAS925 0.59 ABIE53_001545 phosphoribosylamine--glycine ligase 0.46 ABIE53_003159 phosphoserine aminotransferase — —
Burkholderia phytofirmans PsJN 0.59 BPHYT_RS06405 phosphoribosylamine--glycine ligase 0.55 BPHYT_RS14915 phosphoserine aminotransferase 0.72 52
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS24400 phosphoribosylamine--glycine ligase 0.54 QEN71_RS04065 3-phosphoserine/phosphohydroxythreonine transaminase 0.75 19
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS15410 phosphoribosylamine--glycine ligase 0.51 ABZR87_RS09445 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum GMI1000 0.58 RS_RS10995 phosphoribosylamine--glycine ligase 0.52 RS_RS04490 3-phosphoserine/phosphohydroxythreonine aminotransferase — —
Ralstonia solanacearum PSI07 0.58 RPSI07_RS13680 phosphoribosylamine--glycine ligase 0.51 RPSI07_RS19715 3-phosphoserine/phosphohydroxythreonine transaminase — —
Acidovorax sp. GW101-3H11 0.58 Ac3H11_2421 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.50 Ac3H11_2573 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.57 GFF4524 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.52 GFF5342 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Castellaniella sp019104865 MT123 0.57 ABCV34_RS02550 phosphoribosylamine--glycine ligase 0.49 ABCV34_RS07115 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum UW163 0.57 UW163_RS10125 phosphoribosylamine--glycine ligase 0.52 UW163_RS16055 3-phosphoserine/phosphohydroxythreonine transaminase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS03545 phosphoribosylamine--glycine ligase 0.52 RALBFv3_RS13755 3-phosphoserine/phosphohydroxythreonine transaminase — —
Variovorax sp. SCN45 0.56 GFF302 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.50 GFF6183 Phosphoserine aminotransferase (EC 2.6.1.52) — —
Variovorax sp. OAS795 0.56 ABID97_RS16735 phosphoribosylamine--glycine ligase 0.46 ABID97_RS09520 3-phosphoserine/phosphohydroxythreonine transaminase — —
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS04730 phosphoribosylamine--glycine ligase 0.50 RR42_RS04455 MFS transporter — —
Parabacteroides merdae CL09T00C40 0.44 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.38 HMPREF1078_RS15400 3-phosphoserine/phosphohydroxythreonine transaminase 0.96 9
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.39 HMPREF1181_RS16870 3-phosphoserine/phosphohydroxythreonine transaminase — —
Phocaeicola vulgatus CL09T03C04 0.43 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.38 HMPREF1058_RS04300 3-phosphoserine/phosphohydroxythreonine transaminase low > 67
Mucilaginibacter yixingensis YX-36 DSM 26809 0.43 ABZR88_RS01620 phosphoribosylamine--glycine ligase 0.39 ABZR88_RS09230 3-phosphoserine/phosphohydroxythreonine transaminase — —
Phocaeicola dorei CL03T12C01 0.43 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.38 ABI39_RS16905 3-phosphoserine/phosphohydroxythreonine transaminase 0.72 22
Bacteroides thetaiotaomicron VPI-5482 0.43 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.40 BT1153 phosphoserine aminotransferase (NCBI ptt file) 0.59 31
Bacteroides ovatus ATCC 8483 0.42 BACOVA_01348 phosphoribosylamine--glycine ligase 0.39 BACOVA_04029 phosphoserine transaminase 0.86 34
Pedobacter sp. GW460-11-11-14-LB5 0.39 CA265_RS22605 phosphoribosylamine--glycine ligase 0.44 CA265_RS09005 phosphoserine transaminase — —
Mycobacterium tuberculosis H37Rv 0.34 Rv0772 Probable phosphoribosylamine--glycine ligase PurD (GARS) (glycinamide ribonucleotide synthetase) (phosphoribosylglycinamide synthetase) (5'-phosphoribosylglycinamide synthetase) 0.07 Rv0884c Possible phosphoserine aminotransferase SerC (PSAT) — —

Not shown: 24 genomes with orthologs for b4005 only; 0 genomes with orthologs for b0907 only