Conservation of cofitness between b3198 and b0605 in Escherichia coli BW25113

81 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3198 kdsC 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (NCBI) 1.0 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) 0.35 12
Escherichia coli ECOR38 1.00 HEPCGN_16835 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C 0.76 32
Escherichia coli ECRC101 1.00 MCAODC_08480 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC102 1.00 NIAGMN_15720 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC98 1.00 JDDGAC_21585 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECOR27 1.00 NOLOHH_09760 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C low > 57
Escherichia coli ECRC101 1.00 OKFHMN_17960 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC62 1.00 BNILDI_01775 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli ECRC99 1.00 KEDOAH_10190 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C
Escherichia coli Nissle 1917 1.00 ECOLIN_RS18405 3-deoxy-manno-octulosonate-8-phosphatase KdsC 1.00 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00502 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 1.00 OHPLBJKB_03100 Alkyl hydroperoxide reductase C low > 73
Escherichia coli BL21 1.00 ECD_03063 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1.00 ECD_00574 alkyl hydroperoxide reductase, C22 subunit low > 60
Escherichia fergusonii Becca 1.00 EFB2_00625 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 1.00 EFB2_03486 Alkyl hydroperoxide reductase C low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2942 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.99 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 78
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.99 EX28DRAFT_2350 peroxiredoxin low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_04104 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.99 MPMX20_01271 Alkyl hydroperoxide reductase C low > 85
Klebsiella michiganensis M5al 0.85 BWI76_RS25245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.99 BWI76_RS07940 alkyl hydroperoxide reductase subunit C low > 92
Pantoea sp. MT58 0.82 IAI47_17165 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.93 IAI47_06790 alkyl hydroperoxide reductase subunit C low > 76
Pectobacterium carotovorum WPP14 0.79 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.90 HER17_RS02545 alkyl hydroperoxide reductase subunit C low > 75
Erwinia tracheiphila SCR3 0.79 LU632_RS21260 kdsC 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.33 LU632_RS18475 peroxiredoxin C low > 74
Rahnella sp. WP5 0.78 EX31_RS12420 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.32 EX31_RS22080 peroxiredoxin C low > 89
Serratia liquefaciens MT49 0.77 IAI46_22450 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.33 IAI46_04825 peroxiredoxin C low > 86
Dickeya dianthicola 67-19 0.77 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.90 HGI48_RS02460 alkyl hydroperoxide reductase subunit C low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.90 DZA65_RS02565 alkyl hydroperoxide reductase subunit C low > 75
Dickeya dadantii 3937 0.76 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.90 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C low > 74
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.31 CSW01_03815 peroxidase
Shewanella loihica PV-4 0.59 Shew_3307 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.72 Shew_0792 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen (RefSeq)
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_2084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.82 B158DRAFT_0278 peroxiredoxin
Shewanella amazonensis SB2B 0.53 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.70 Sama_0617 alkyl hydroperoxide reductase, C subunit (RefSeq)
Shewanella sp. ANA-3 0.52 Shewana3_0676 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) 0.71 Shewana3_3325 alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen (RefSeq)
Shewanella oneidensis MR-1 0.52 SO3957 conserved hypothetical protein (NCBI ptt file) 0.70 SO0958 ahpC alkyl hydroperoxide reductase, C subunit (NCBI ptt file)
Alteromonas macleodii MIT1002 0.46 MIT1002_00831 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.82 MIT1002_01784 Alkyl hydroperoxide reductase subunit C
Marinobacter adhaerens HP15 0.45 HP15_2438 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.80 HP15_3622 peroxiredoxin
Pseudomonas fluorescens FW300-N1B4 0.44 Pf1N1B4_1076 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.74 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas simiae WCS417 0.44 PS417_04365 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.74 PS417_14045 alkyl hydroperoxide reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS04420 HAD family hydrolase 0.74 PFLU_RS14570 peroxiredoxin
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_05160 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.74 AO353_26965 alkyl hydroperoxide reductase
Pseudomonas fluorescens SBW25 0.44 PFLU_RS04420 HAD family hydrolase 0.74 PFLU_RS14570 peroxiredoxin
Dyella japonica UNC79MFTsu3.2 0.43 ABZR86_RS19835 HAD family hydrolase 0.76 ABZR86_RS08490 alkyl hydroperoxide reductase subunit C
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS01775 HAD family hydrolase 0.71 QEN71_RS13380 alkyl hydroperoxide reductase subunit C
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_5010 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.74 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas sp. RS175 0.43 PFR28_00177 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.74 PFR28_02482 Alkyl hydroperoxide reductase C
Pseudomonas fluorescens FW300-N2C3 0.42 AO356_07015 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.74 AO356_22805 alkyl hydroperoxide reductase
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_3263 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.74 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Pseudomonas stutzeri RCH2 0.42 Psest_3309 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.65 Psest_1133 peroxiredoxin
Pseudomonas putida KT2440 0.42 PP_0956 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.74 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI 0.74 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI 0.74 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen low > 86
Paraburkholderia graminis OAS925 0.41 ABIE53_000722 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) 0.72 ABIE53_005904 peroxiredoxin low > 113
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_01923 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) 0.72 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) low > 103
Ralstonia solanacearum GMI1000 0.40 RS_RS02040 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.62 RS_RS18335 peroxiredoxin low > 80
Rhodanobacter denitrificans FW104-10B01 0.40 LRK54_RS12895 HAD hydrolase family protein 0.77 LRK54_RS00705 alkyl hydroperoxide reductase subunit C
Rhodanobacter denitrificans MT42 0.40 LRK55_RS12595 HAD hydrolase family protein 0.77 LRK55_RS00480 alkyl hydroperoxide reductase subunit C
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS02925 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.71 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C
Pseudomonas sp. S08-1 0.39 OH686_08520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.64 OH686_18680 peroxiredoxin
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS19835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.72 HSERO_RS21540 alkyl hydroperoxide reductase subunit C low > 78
Rhodanobacter sp. FW510-T8 0.39 OKGIIK_02285 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.77 OKGIIK_06555 ahpC alkyl hydroperoxide reductase subunit C
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS07080 HAD family hydrolase 0.62 ABZR87_RS17235 alkyl hydroperoxide reductase subunit C low > 80
Castellaniella sp019104865 MT123 0.37 ABCV34_RS14365 HAD hydrolase family protein 0.74 ABCV34_RS09920 alkyl hydroperoxide reductase subunit C
Ralstonia solanacearum PSI07 0.37 RPSI07_RS22110 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.61 RPSI07_RS00930 peroxiredoxin low > 81
Acinetobacter radioresistens SK82 0.37 MPMX26_01968 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC 0.77 MPMX26_02009 Alkyl hydroperoxide reductase C
Synechococcus elongatus PCC 7942 0.37 Synpcc7942_2288 Phosphatase kdsC 0.35 Synpcc7942_2309 2-cys prx thioredoxin peroxidase low > 38
Dechlorosoma suillum PS 0.37 Dsui_1381 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.60 Dsui_1901 peroxiredoxin low > 51
Variovorax sp. OAS795 0.36 ABID97_RS02625 HAD hydrolase family protein 0.61 ABID97_RS10800 alkyl hydroperoxide reductase subunit C low > 91
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1666.1 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.61 Xcc-8004.4221.1 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.28 68
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS11190 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.61 RALBFv3_RS22270 peroxiredoxin low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS02390 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.61 UW163_RS22815 peroxiredoxin
Lysobacter sp. OAE881 0.35 ABIE51_RS15935 HAD hydrolase family protein 0.77 ABIE51_RS05485 alkyl hydroperoxide reductase subunit C
Desulfovibrio vulgaris Hildenborough JW710 0.34 DVU1625 phosphatase, YrbI family (TIGR) 0.31 DVU2247 ahpC alkyl hydroperoxide reductase C (Dmitry Rodionov)
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2130 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.28 Echvi_1832 Peroxiredoxin low > 79
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS00030 HAD-IIIA family hydrolase 0.68 HMPREF1078_RS04205 alkyl hydroperoxide reductase subunit C low > 61
Fusobacterium nucleatum SB010 0.33 HUW76_02570 HAD family hydrolase 0.59 HUW76_10130 peroxiredoxin low > 35
Variovorax sp. SCN45 0.33 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.61 GFF2826 Alkyl hydroperoxide reductase protein C (EC 1.11.1.15) low > 127
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_18675 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 0.31 CA264_00400 alkyl hydroperoxide reductase low > 74
Desulfovibrio vulgaris Miyazaki F 0.32 DvMF_0431 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family (RefSeq) 0.46 DvMF_0219 Peroxiredoxin (RefSeq) low > 51
Acidovorax sp. GW101-3H11 0.31 Ac3H11_4271 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.60 Ac3H11_233 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-)
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12455 HAD-IIIA family hydrolase 0.65 ABI39_RS03995 peroxiredoxin
Phocaeicola vulgatus CL09T03C04 0.29 HMPREF1058_RS16535 HAD-IIIA family hydrolase 0.65 HMPREF1058_RS09540 peroxiredoxin
Bacteroides thetaiotaomicron VPI-5482 0.28 BT1677 putative hydrolase (NCBI ptt file) 0.65 BT2812 alkyl hydroperoxide reductase C22 protein (NCBI ptt file)
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS01295 HAD-IIIA family hydrolase 0.66 HMPREF1181_RS02155 peroxiredoxin low > 56
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF2443 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) 0.60 GFF3914 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) low > 90
Bacteroides ovatus ATCC 8483 0.26 BACOVA_04421 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 0.64 BACOVA_02068 peroxiredoxin

Not shown: 1 genomes with orthologs for b3198 only; 10 genomes with orthologs for b0605 only