Homologs of Xcc-8004.2798.1 from Xanthomonas campestris pv. campestris strain 8004

RNA polymerase sigma-54 factor RpoN
SEED: RNA polymerase sigma-54 factor RpoN
KEGG: RNA polymerase sigma-54 factor

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2798.1 RNA polymerase sigma-54 factor RpoN insig. 100 100
o Lysobacter sp. OAE881 ABIE51_RS16760 RNA polymerase factor sigma-54 cofit 57 96
  Pseudomonas sp. S08-1 OH686_08540 RNA polymerase sigma-54 factor no data 40 94
  Pseudomonas aeruginosa PA14 IKLFDK_01770 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas fluorescens SBW25 PFLU_RS04400 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS04400 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas fluorescens FW300-N2E3 AO353_05180 RNA polymerase sigma-54 factor no data 39 94
  Pseudomonas sp. DMC3 GFF1828 RNA polymerase sigma-54 factor no data 40 92
  Pseudomonas fluorescens FW300-N2C3 AO356_07035 RNA polymerase sigma-54 factor no data 39 94
  Pseudomonas putida KT2440 PP_0952 RNA polymerase sigma-54 factor no data 39 94
  Pseudomonas sp. BP01 JOY50_RS11130 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas simiae WCS417 PS417_04345 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas syringae pv. syringae B728a Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL no data 38 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4147 RNA polymerase, sigma 54 subunit, RpoN/SigL no data 38 96
  Pseudomonas stutzeri RCH2 Psest_3313 RNA polymerase sigma-54 factor no data 40 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01075 RNA polymerase sigma-54 factor no data 39 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_5014 RNA polymerase sigma-54 factor RpoN no data 39 92
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3267 RNA polymerase sigma-54 factor RpoN no data 39 92
  Pseudomonas sp. SVBP6 COO64_RS04285 RNA polymerase factor sigma-54 no data 39 94
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1080 RNA polymerase sigma-54 factor RpoN no data 39 92
  Pseudomonas sp. RS175 PFR28_00173 RNA polymerase sigma-54 factor no data 39 92
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2946 RNA polymerase sigma-54 factor RpoN strong 40 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_12815 RNA polymerase sigma-54 factor sig. 38 94
  Klebsiella pneumoniae MKP103 KDGMDA_06080 RNA polymerase factor sigma-54 strong 40 94
  Escherichia coli ECOR27 NOLOHH_09740 rpoN RNA polymerase factor sigma-54 no data 40 94
  Marinobacter adhaerens HP15 HP15_2442 RNA polymerase, sigma 54 subunit, RpoN strong 39 94
  Escherichia coli BL21 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor strong 40 94
  Escherichia fergusonii Becca EFB2_00621 RNA polymerase sigma-54 factor no data 40 94
  Escherichia coli ECOR38 HEPCGN_16815 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC100 OKFHMN_17940 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC101 MCAODC_08460 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC102 NIAGMN_15700 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC62 BNILDI_01795 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC98 JDDGAC_21565 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli ECRC99 KEDOAH_10210 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00498 RNA polymerase sigma-54 factor no data 40 94
  Escherichia coli Nissle 1917 ECOLIN_RS18425 RNA polymerase factor sigma-54 no data 40 94
  Enterobacter asburiae PDN3 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL no data 40 94
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_13740 rpoN RNA polymerase factor sigma-54 cofit 40 94
  Erwinia tracheiphila SCR3 LU632_RS21280 rpoN RNA polymerase factor sigma-54 no data 40 94
  Escherichia coli BW25113 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI) no data 39 94
  Rahnella sp. WP5 EX31_RS12400 RNA polymerase factor sigma-54 strong 39 94
  Dickeya dianthicola 67-19 HGI48_RS01445 RNA polymerase factor sigma-54 cofit 39 94
  Pantoea sp. MT58 IAI47_17185 RNA polymerase factor sigma-54 strong 40 94
  Dickeya dadantii 3937 DDA3937_RS01530 RNA polymerase factor sigma-54 strong 39 94
  Dickeya dianthicola ME23 DZA65_RS01510 RNA polymerase factor sigma-54 strong 39 94
  Klebsiella michiganensis M5al BWI76_RS25265 RNA polymerase factor sigma-54 no data 39 94
  Rhodanobacter denitrificans MT42 LRK55_RS12575 RNA polymerase factor sigma-54 cofit 42 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS12875 RNA polymerase factor sigma-54 strong 42 94
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19815 RNA polymerase factor sigma-54 strong 42 94
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09350 RNA polymerase factor sigma-54 cofit 40 94
  Serratia liquefaciens MT49 IAI46_22470 RNA polymerase factor sigma-54 no data 39 94
  Enterobacter sp. TBS_079 MPMX20_04108 RNA polymerase sigma-54 factor no data 39 94
  Pectobacterium carotovorum WPP14 HER17_RS20060 RNA polymerase factor sigma-54 strong 39 94
  Rhodanobacter sp. FW510-T8 OKGIIK_02265 RNA polymerase factor sigma-54 insig. 42 95
  Erwinia amylovora T8 OLJFJH_07070 RNA polymerase factor sigma-54 strong 39 94
  Shewanella oneidensis MR-1 SO3961 rpoN RNA polymerase sigma-54 factor (NCBI ptt file) strong 39 94
  Lysobacter sp. OAE881 ABIE51_RS15955 RNA polymerase factor sigma-54 strong 41 94
  Shewanella sp. ANA-3 Shewana3_0672 RNA polymerase factor sigma-54 (RefSeq) strong 39 94
  Shewanella loihica PV-4 Shew_3311 RNA polymerase factor sigma-54 (RefSeq) strong 38 94
  Alteromonas macleodii MIT1002 MIT1002_00827 RNA polymerase sigma-54 factor 2 cofit 35 94
  Shewanella amazonensis SB2B Sama_3088 RNA polymerase factor sigma-54 (RefSeq) strong 38 94
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1662.1 RNA polymerase sigma-54 factor RpoN strong 42 94
  Cupriavidus basilensis FW507-4G11 RR42_RS02085 RNA polymerase subunit sigma-54 strong 41 94
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS15705 RNA polymerase factor sigma-54 strong 42 94
  Dechlorosoma suillum PS Dsui_0704 RNA polymerase sigma-54 factor strong 37 94
  Ralstonia solanacearum GMI1000 RS_RS02020 RNA polymerase sigma-54 factor insig. 37 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS11170 RNA polymerase sigma-54 factor sig. 38 94
  Ralstonia solanacearum UW163 UW163_RS02410 RNA polymerase sigma-54 factor insig. 38 94
  Ralstonia solanacearum PSI07 RPSI07_RS22130 RNA polymerase factor sigma-54 cofit 38 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS01755 RNA polymerase factor sigma-54 strong 38 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01927 RNA polymerase, sigma 54 subunit, RpoN/SigL strong 38 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS07060 RNA polymerase factor sigma-54 strong 38 94
  Burkholderia phytofirmans PsJN BPHYT_RS02905 RNA polymerase subunit sigma-54 strong 38 94
  Paraburkholderia graminis OAS925 ABIE53_000718 RNA polymerase sigma-54 factor strong 38 94
  Herbaspirillum seropedicae SmR1 HSERO_RS19855 RNA polymerase subunit sigma-54 no data 37 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS10760 RNA polymerase factor sigma-54 insig. 36 94
  Variovorax sp. OAS795 ABID97_RS04780 RNA polymerase factor sigma-54 no data 34 94
  Variovorax sp. SCN45 GFF6290 RNA polymerase sigma-54 factor RpoN strong 34 94
  Burkholderia phytofirmans PsJN BPHYT_RS27005 RNA polymerase sigma54 factor insig. 36 93
  Ralstonia solanacearum GMI1000 RS_RS25120 RNA polymerase sigma-54 factor insig. 38 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02908 RNA polymerase, sigma 54 subunit, RpoN/SigL sig. 37 93
  Paraburkholderia graminis OAS925 ABIE53_005882 RNA polymerase sigma-54 factor strong 36 93
  Acidovorax sp. GW101-3H11 Ac3H11_727 RNA polymerase sigma-54 factor RpoN strong 36 94
  Ralstonia sp. UNC404CL21Col ABZR87_RS23535 RNA polymerase factor sigma-54 strong 38 94
  Methylophilus sp. DMC18 GFF2777 RNA polymerase sigma-54 factor strong 33 94
  Ralstonia solanacearum PSI07 RPSI07_RS07850 RNA polymerase factor sigma-54 insig. 37 94
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS23300 RNA polymerase sigma-54 factor insig. 36 94
  Ralstonia solanacearum UW163 UW163_RS16550 RNA polymerase sigma-54 factor insig. 36 94
  Bosea sp. OAE506 ABIE41_RS00125 RNA polymerase factor sigma-54 insig. 36 92
  Acinetobacter baumannii LAC-4 RR41_RS15830 RNA polymerase factor sigma-54 insig. 35 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3068 RNA polymerase sigma-54 factor RpoN strong 38 81
  Rhizobium sp. OAE497 ABIE40_RS01860 RNA polymerase factor sigma-54 strong 34 94
  Agrobacterium fabrum C58 Atu0332 RNA polymerase sigma-54 factor strong 35 93
  Kangiella aquimarina DSM 16071 B158DRAFT_2080 RNA polymerase, sigma 54 subunit, RpoN/SigL insig. 32 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3646 RNA polymerase sigma-54 factor RpoN insig. 35 93
  Sinorhizobium meliloti 1021 SMc01139 RNA polymerase factor sigma-54 strong 35 94
  Acinetobacter radioresistens SK82 MPMX26_02592 RNA polymerase sigma-54 factor strong 32 94
  Rhodospirillum rubrum S1H Rru_A0010 Sigma-54 (RpoN) (NCBI) sig. 36 92
  Variovorax sp. OAS795 ABID97_RS11945 RNA polymerase factor sigma-54 insig. 35 94