Homologs of SMc00622 from Sinorhizobium meliloti 1021

ribonuclease D protein
SEED: Ribonuclease D (EC 3.1.26.3)
KEGG: ribonuclease D

92 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sinorhizobium meliloti 1021 SMc00622 ribonuclease D protein strong 100 100
o Rhizobium sp. OAE497 ABIE40_RS06640 ribonuclease D no data 78 99
o Agrobacterium fabrum C58 Atu1151 ribonuclease D no data 77 98
o Rhodopseudomonas palustris CGA009 TX73_015755 ribonuclease D strong 56 100
o Bosea sp. OAE506 ABIE41_RS16115 ribonuclease D no data 59 97
o Azospirillum brasilense Sp245 AZOBR_RS16220 ribonuclease D insig. 52 100
o Azospirillum sp. SherDot2 MPMX19_00986 Ribonuclease D sig. 53 100
o Rhodospirillum rubrum S1H Rru_A2073 Ribonuclease D (NCBI) no data 52 96
o Magnetospirillum magneticum AMB-1 AMB_RS14275 ribonuclease D no data 53 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08205 ribonuclease D no data 51 99
o Caulobacter crescentus NA1000 CCNA_01776 ribonuclease D no data 51 96
o Caulobacter crescentus NA1000 Δfur CCNA_01776 ribonuclease D no data 51 96
o Phaeobacter inhibens DSM 17395 PGA1_c13290 putative ribonuclease D no data 50 96
o Dinoroseobacter shibae DFL-12 Dshi_1887 ribonuclease D (RefSeq) strong 47 98
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0222 ribonuclease D no data 44 98
o Pseudomonas sp. S08-1 OH686_05315 ribonuclease D strong 33 94
o Pseudomonas putida KT2440 PP_4591 Ribonuclease D sig. 31 95
o Pseudomonas syringae pv. syringae B728a Psyr_1563 Ribonuclease D strong 32 91
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1563 Ribonuclease D insig. 32 91
o Pseudomonas stutzeri RCH2 Psest_2995 ribonuclease D no data 32 92
o Pseudomonas fluorescens SBW25 PFLU_RS07465 ribonuclease D insig. 32 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07465 ribonuclease D strong 32 91
o Pseudomonas sp. RS175 PFR28_00712 Ribonuclease D insig. 33 91
o Pseudomonas fluorescens FW300-N2E3 AO353_17855 ribonuclease D strong 32 95
o Pseudomonas fluorescens FW300-N2C3 AO356_04420 ribonuclease D sig. 32 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) sig. 32 94
o Pseudomonas simiae WCS417 PS417_07375 ribonuclease D sig. 32 91
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) sig. 32 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) insig. 31 94
o Shewanella oneidensis MR-1 SO2580 rnd ribonuclease D (NCBI ptt file) sig. 32 95
o Shewanella sp. ANA-3 Shewana3_2385 ribonuclease D (RefSeq) insig. 31 93
o Shewanella loihica PV-4 Shew_2187 ribonuclease D (RefSeq) insig. 30 92
o Serratia liquefaciens MT49 IAI46_14530 ribonuclease D insig. 31 93
o Alteromonas macleodii MIT1002 MIT1002_02587 Ribonuclease D insig. 31 95
o Dickeya dianthicola 67-19 HGI48_RS11255 ribonuclease D cofit 32 93
o Klebsiella michiganensis M5al BWI76_RS17795 ribonuclease D sig. 32 87
o Dickeya dadantii 3937 DDA3937_RS11220 ribonuclease D insig. 32 93
o Pantoea sp. MT58 IAI47_08840 ribonuclease D sig. 30 93
o Dickeya dianthicola ME23 DZA65_RS11600 ribonuclease D sig. 32 93
o Shewanella amazonensis SB2B Sama_1933 ribonuclease D (RefSeq) strong 29 91
o Escherichia fergusonii Becca EFB2_02196 Ribonuclease D insig. 29 93
o Escherichia coli Nissle 1917 ECOLIN_RS10035 ribonuclease D no data 29 93
o Rahnella sp. WP5 EX31_RS10595 ribonuclease D insig. 29 93
o Pectobacterium carotovorum WPP14 HER17_RS11270 ribonuclease D strong 30 95
o Escherichia coli BL21 ECD_01774 ribonuclease D insig. 29 93
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01929 Ribonuclease D insig. 29 93
o Escherichia coli BW25113 b1804 rnd ribonuclease D (NCBI) strong 29 93
o Escherichia coli ECOR27 NOLOHH_17125 rnd ribonuclease D no data 29 93
o Escherichia coli ECOR38 HEPCGN_04995 rnd ribonuclease D cofit 29 93
o Escherichia coli ECRC101 OKFHMN_26605 rnd ribonuclease D no data 29 93
o Escherichia coli ECRC101 MCAODC_18805 rnd ribonuclease D insig. 29 93
o Escherichia coli ECRC102 NIAGMN_01460 rnd ribonuclease D no data 29 93
o Escherichia coli ECRC62 BNILDI_15910 rnd ribonuclease D insig. 29 93
o Escherichia coli ECRC98 JDDGAC_01180 rnd ribonuclease D no data 29 93
o Escherichia coli ECRC99 KEDOAH_01505 rnd ribonuclease D no data 29 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_09900 ribonuclease D insig. 31 93
o Enterobacter asburiae PDN3 EX28DRAFT_0755 ribonuclease D strong 29 95
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2819 Ribonuclease D (EC 3.1.26.3) strong 28 93
o Marinobacter adhaerens HP15 HP15_1882 ribonuclease D insig. 29 88
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) insig. 33 91
o Enterobacter sp. TBS_079 MPMX20_02710 Ribonuclease D strong 28 93
o Erwinia tracheiphila SCR3 LU632_RS13130 rnd ribonuclease D insig. 30 93
o Rhodanobacter sp. FW510-T8 OKGIIK_08985 Ribonuclease D insig. 32 91
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18455 ribonuclease D insig. 31 85
o Kangiella aquimarina DSM 16071 B158DRAFT_1574 ribonuclease D insig. 27 85
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07350 ribonuclease D insig. 32 60
o Rhodanobacter denitrificans MT42 LRK55_RS15770 ribonuclease D cofit 31 91
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16010 ribonuclease D sig. 31 91
o Acinetobacter radioresistens SK82 MPMX26_01642 Ribonuclease D strong 24 96
  Azospirillum brasilense Sp245 AZOBR_RS18845 3'-5' exonuclease no data 30 49
  Mycobacterium tuberculosis H37Rv Rv2681 Conserved hypothetical alanine rich protein sig. 30 56
  Azospirillum sp. SherDot2 MPMX19_02663 Ribonuclease D no data 32 46
  Phaeobacter inhibens DSM 17395 PGA1_c36020 putative 3'-5'-exonuclease insig. 31 45
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2539 3'-5' exonuclease no data 31 45
  Bosea sp. OAE506 ABIE41_RS00145 ribonuclease D no data 29 45
  Agrobacterium fabrum C58 Atu4108 ribonuclease D strong 30 45
  Rhodopseudomonas palustris CGA009 TX73_000240 ribonuclease D no data 29 46
  Rhizobium sp. OAE497 ABIE40_RS00155 ribonuclease D strong 29 45
  Sinorhizobium meliloti 1021 SMc00342 hypothetical protein no data 29 45
  Rhodospirillum rubrum S1H Rru_A0015 3'-5' exonuclease (NCBI) no data 27 45
  Synechococcus elongatus PCC 7942 Synpcc7942_0678 rnd 3'-5' exonuclease strong 30 46
  Dinoroseobacter shibae DFL-12 Dshi_3589 3'-5' exonuclease (RefSeq) no data 28 45
  Caulobacter crescentus NA1000 CCNA_03717 ribonuclease D no data 28 46
  Caulobacter crescentus NA1000 Δfur CCNA_03717 ribonuclease D no data 28 46
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS16055 ribonuclease D no data 29 46
  Magnetospirillum magneticum AMB-1 AMB_RS19900 ribonuclease D no data 28 45
  Bifidobacterium breve UCC2003 BBR_RS14490 ribonuclease D strong 26 55
  Shewanella oneidensis MR-1 SO1153 exonuclease, putative (NCBI ptt file) insig. 27 42
  Bacteroides stercoris CC31F HMPREF1181_RS05920 3'-5' exonuclease domain-containing protein 2 sig. 28 50
  Bacteroides thetaiotaomicron VPI-5482 BT4332 conserved hypothetical protein (NCBI ptt file) strong 27 45
  Shewanella sp. ANA-3 Shewana3_0980 3'-5' exonuclease (RefSeq) insig. 27 38
  Bacteroides ovatus ATCC 8483 BACOVA_05135 3'-5' exonuclease sig. 27 45