Homologs of Pf6N2E2_2499 from Pseudomonas fluorescens FW300-N2E2

Competence protein ComEA helix-hairpin-helix region precursor
SEED: Competence protein ComEA helix-hairpin-helix region precursor
KEGG: competence protein ComEA

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2499 Competence protein ComEA helix-hairpin-helix region precursor insig. 100 100
o Pseudomonas fluorescens FW300-N2C3 AO356_03335 competence protein ComEA insig. 80 100
o Pseudomonas sp. RS175 PFR28_00933 hypothetical protein insig. 77 100
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_322 nucleotide sugar epimerase/dehydratase WbpM sig. 77 100
o Pseudomonas fluorescens FW300-N2E3 AO353_01965 competence protein ComEA sig. 73 100
o Pseudomonas fluorescens SBW25 PFLU_RS08195 ComEA family DNA-binding protein no data 58 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08195 ComEA family DNA-binding protein no data 58 100
o Pseudomonas simiae WCS417 PS417_08250 competence protein ComEA sig. 59 100
o Pseudomonas syringae pv. syringae B728a Psyr_3635 Competence protein ComEA helix-hairpin-helix region no data 52 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3635 Competence protein ComEA helix-hairpin-helix region insig. 52 100
o Pseudomonas putida KT2440 PP_1813 ComEA-related protein insig. 54 99
o Pseudomonas stutzeri RCH2 Psest_2957 competence protein ComEA helix-hairpin-helix repeat region insig. 57 88
o Pseudomonas sp. S08-1 OH686_20920 hypothetical protein cofit 42 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09315 helix-hairpin-helix domain-containing protein no data 55 54
  Rhodanobacter denitrificans MT42 LRK55_RS02665 helix-hairpin-helix domain-containing protein no data 56 53
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS02915 helix-hairpin-helix domain-containing protein no data 56 53
  Lysobacter sp. OAE881 ABIE51_RS15800 ComEA family DNA-binding protein no data 55 54
  Dickeya dadantii 3937 DDA3937_RS05665 helix-hairpin-helix domain-containing protein insig. 46 70
o Dickeya dianthicola 67-19 HGI48_RS05710 helix-hairpin-helix domain-containing protein insig. 41 96
  Rhodanobacter sp. FW510-T8 OKGIIK_09895 Competence protein ComEA no data 56 53
  Serratia liquefaciens MT49 IAI46_05035 helix-hairpin-helix domain-containing protein insig. 53 56
  Pectobacterium carotovorum WPP14 HER17_RS15825 helix-hairpin-helix domain-containing protein insig. 51 57
o Escherichia fergusonii Becca EFB2_03615 hypothetical protein insig. 41 87
o Escherichia coli ECOR27 NOLOHH_01240 ybaV Uncharacterized protein YbaV cofit 41 87
o Escherichia coli ECRC62 BNILDI_22655 ybaV Uncharacterized protein YbaV insig. 41 87
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03231 hypothetical protein insig. 41 87
o Escherichia coli Nissle 1917 ECOLIN_RS02650 helix-hairpin-helix domain-containing protein insig. 41 87
o Escherichia coli BW25113 b0442 ybaV hypothetical protein (NCBI) insig. 41 87
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1684.1 DNA transport competence protein insig. 56 57
o Dickeya dianthicola ME23 DZA65_RS06035 competence protein ComEA insig. 41 96
  Pantoea sp. MT58 IAI47_14630 helix-hairpin-helix domain-containing protein insig. 44 63
o Escherichia coli ECRC101 OKFHMN_08305 ybaV Uncharacterized protein YbaV insig. 40 87
o Escherichia coli ECRC101 MCAODC_27530 ybaV Uncharacterized protein YbaV insig. 40 87
o Escherichia coli ECRC102 NIAGMN_06360 ybaV Uncharacterized protein YbaV insig. 40 87
o Escherichia coli ECRC98 JDDGAC_11960 ybaV Uncharacterized protein YbaV no data 40 87
o Escherichia coli ECRC99 KEDOAH_19660 ybaV Uncharacterized protein YbaV no data 40 87
  Marinobacter adhaerens HP15 HP15_2885 secreted protein containing competence protein ComEA, helix-hairpin-helix region domain insig. 51 62
  Acinetobacter radioresistens SK82 MPMX26_00542 hypothetical protein no data 46 62
o Klebsiella michiganensis M5al BWI76_RS06550 competence protein ComEA insig. 36 99
  Rahnella sp. WP5 EX31_RS22270 competence protein ComEA insig. 44 65
  Kangiella aquimarina DSM 16071 B158DRAFT_2332 competence protein ComEA helix-hairpin-helix repeat region insig. 46 64
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4358 FIG01200701: possible membrane protein insig. 40 94
  Shewanella amazonensis SB2B Sama_1243 DNA uptake protein-related DNA-binding protein (RefSeq) sig. 45 74
o Escherichia coli ECOR38 HEPCGN_06920 ybaV Uncharacterized protein YbaV insig. 46 58
o Escherichia coli BL21 ECD_00394 putative competence-suppressing periplasmic helix-hairpin-helix DNA-binding protein insig. 47 54
  Enterobacter asburiae PDN3 EX28DRAFT_2528 competence protein ComEA helix-hairpin-helix repeat region insig. 42 64
o Enterobacter sp. TBS_079 MPMX20_01033 hypothetical protein insig. 33 99
  Shewanella loihica PV-4 Shew_2489 helix-hairpin-helix repeat-containing competence protein ComEA (RefSeq) insig. 42 73
  Vibrio cholerae E7946 ATCC 55056 CSW01_09590 competence protein ComEA insig. 52 50
  Shewanella sp. ANA-3 Shewana3_2642 helix-hairpin-helix repeat-containing competence protein ComEA (RefSeq) insig. 42 59
  Alteromonas macleodii MIT1002 MIT1002_00982 ComE operon protein 1 insig. 37 77
  Shewanella oneidensis MR-1 SO1813 DNA-binding protein, putative (NCBI ptt file) insig. 42 59
  Erwinia tracheiphila SCR3 LU632_RS18320 helix-hairpin-helix domain-containing protein insig. 46 62
  Mycobacterium tuberculosis H37Rv Rv2415c Conserved hypothetical protein insig. 48 56
  Sinorhizobium meliloti 1021 SMc02644 hypothetical protein insig. 55 44
  Agrobacterium fabrum C58 Atu0648 hypothetical protein insig. 50 45
  Bifidobacterium breve UCC2003 BBR_RS16270 competence protein ComEA insig. 39 74
  Phaeobacter inhibens DSM 17395 PGA1_c09850 S1 domain-containing protein insig. 55 44
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02815 hypothetical protein insig. 42 62
  Variovorax sp. OAS795 ABID97_RS15930 Tex family protein sig. 42 65
  Rhodopseudomonas palustris CGA009 TX73_003025 Tex family protein insig. 53 44
  Methanococcus maripaludis JJ MMJJ_RS08530 RNA-binding transcriptional accessory protein insig. 47 51
  Rhizobium sp. OAE497 ABIE40_RS05475 Tex family protein insig. 47 44
  Variovorax sp. SCN45 GFF2 Transcription accessory protein (S1 RNA-binding domain) cofit 40 65
  Methanococcus maripaludis S2 MMP_RS05820 RNA-binding transcriptional accessory protein insig. 47 51
  Phocaeicola dorei CL03T12C01 ABI39_RS14580 RNA-binding transcriptional accessory protein insig. 44 50
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18285 RNA-binding transcriptional accessory protein insig. 44 50
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4649 Transcription accessory protein (S1 RNA-binding domain) insig. 45 44
  Acidovorax sp. GW101-3H11 Ac3H11_2501 Transcription accessory protein (S1 RNA-binding domain) no data 44 47
  Paraburkholderia graminis OAS925 ABIE53_002035 competence protein ComEA insig. 40 57
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS12820 helix-hairpin-helix domain-containing protein insig. 42 51
  Lysobacter sp. OAE881 ABIE51_RS00300 Tex family protein insig. 49 44
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00819 competence protein ComEA insig. 38 59
  Fusobacterium nucleatum SB010 HUW76_00320 RNA-binding transcriptional accessory protein cofit 46 43
  Pectobacterium carotovorum WPP14 HER17_RS01615 RNA-binding transcriptional accessory protein cofit 37 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS06045 Tex family protein strong 40 57
  Serratia liquefaciens MT49 IAI46_23800 RNA-binding transcriptional accessory protein insig. 37 57
  Paraburkholderia sabiae LMG 24235 QEN71_RS22360 helix-hairpin-helix domain-containing protein no data 45 45
  Burkholderia phytofirmans PsJN BPHYT_RS09000 competence protein ComE insig. 40 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2426.1 Transcription accessory protein (S1 RNA-binding domain) insig. 45 42
  Paraburkholderia sabiae LMG 24235 QEN71_RS04130 helix-hairpin-helix domain-containing protein insig. 41 50
  Escherichia coli BL21 ECD_03259 putative transcriptional accessory protein cofit 35 57
  Escherichia coli BW25113 b3407 yhgF orf, hypothetical protein (VIMSS) sig. 35 57
  Escherichia coli ECOR27 NOLOHH_08815 yhgF Protein YhgF cofit 35 57
  Escherichia coli ECRC62 BNILDI_02705 yhgF Protein YhgF insig. 35 57
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00296 Protein YhgF cofit 35 57
  Escherichia fergusonii Becca EFB2_00421 Protein YhgF insig. 35 57
  Escherichia coli ECOR38 HEPCGN_15835 yhgF Protein YhgF cofit 35 57
  Escherichia coli ECRC101 OKFHMN_17025 yhgF Protein YhgF insig. 35 57
  Escherichia coli ECRC101 MCAODC_07555 yhgF Protein YhgF insig. 35 57
  Escherichia coli ECRC102 NIAGMN_14795 yhgF Protein YhgF insig. 35 57
  Escherichia coli ECRC98 JDDGAC_20655 yhgF Protein YhgF no data 35 57
  Escherichia coli ECRC99 KEDOAH_11115 yhgF Protein YhgF no data 35 57
  Escherichia coli Nissle 1917 ECOLIN_RS19465 Tex family protein cofit 35 57
  Enterobacter asburiae PDN3 EX28DRAFT_4136 Transcriptional accessory protein insig. 35 57
  Burkholderia phytofirmans PsJN BPHYT_RS12510 RNA-binding protein insig. 40 57
  Paraburkholderia graminis OAS925 ABIE53_002728 uncharacterized protein strong 40 57
  Enterobacter sp. TBS_079 MPMX20_04294 Protein YhgF insig. 35 57
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF611 Transcription accessory protein (S1 RNA-binding domain) insig. 35 57
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS13820 competence protein ComEA no data 41 48