Homologs of PP_1983 from Pseudomonas putida KT2440

PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_1983 PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS16640 PAS domain S-box protein insig. 96 100
o Pseudomonas sp. SVBP6 COO64_RS05675 EAL domain-containing protein insig. 87 100
o Pseudomonas fluorescens FW300-N2E3 AO353_20610 histidine kinase insig. 79 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3950 Sensory box/GGDEF family protein insig. 78 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_17 Sensory box/GGDEF family protein insig. 79 98
o Pseudomonas sp. RS175 PFR28_02826 hypothetical protein strong 78 99
o Pseudomonas fluorescens FW300-N2C3 AO356_21390 histidine kinase insig. 78 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_60 Sensory box/GGDEF family protein insig. 78 99
o Pseudomonas orientalis W4I3 QF045_RS20750 PAS domain S-box protein insig. 77 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03950 hypothetical protein cofit 77 98
o Pseudomonas simiae WCS417 PS417_18610 histidine kinase sig. 78 99
o Pseudomonas fluorescens SBW25 PFLU_RS20590 EAL domain-containing protein insig. 77 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS20590 EAL domain-containing protein insig. 77 99
  Pseudomonas segetis P6 ACVTMO_RS15240 PAS domain S-box protein insig. 60 88
  Pseudomonas sp. S08-1 OH686_04490 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 69 74
  Pseudomonas syringae pv. syringae B728a Psyr_1981 PAS:GGDEF insig. 71 53
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1981 PAS:GGDEF insig. 71 53
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 40 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 40 63
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 40 63
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 40 63
  Pseudomonas orientalis W4I3 QF045_RS00285 EAL domain-containing protein cofit 40 63
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 40 63
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 40 63
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 40 63
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 63
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 63
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 40 63
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 40 63
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 41 63
  Acidovorax sp. GW101-3H11 Ac3H11_2210 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 32 96
  Pseudomonas aeruginosa MRSN321 DY961_RS22900 EAL domain-containing protein insig. 39 64
  Pseudomonas aeruginosa PUPa3 DQ20_RS36445 EAL domain-containing protein insig. 39 64
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase insig. 39 64
  Acidovorax sp. GW101-3H11 Ac3H11_2319 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 41 63
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 38 63
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 38 63
  Pseudomonas segetis P6 ACVTMO_RS04275 EAL domain-containing protein insig. 38 64
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 33 87
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 43 53
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 75
  Acidovorax sp. GW101-3H11 Ac3H11_1143 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 44 52
  Acidovorax sp. GW101-3H11 Ac3H11_402 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 75
  Pseudomonas orientalis W4I3 QF045_RS26570 EAL domain-containing protein insig. 36 68
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 35 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 75
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 34 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 34 79
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 40 55
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 34 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 34 79
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 34 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 35 72
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 42 52
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 36 68
  Acidovorax sp. GW101-3H11 Ac3H11_4268 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 52
  Pseudomonas aeruginosa MRSN321 DY961_RS23425 morA;inference=COORDINATES cyclic di-GMP receptor MorA insig. 38 66
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 38 66
  Pseudomonas aeruginosa PUPa3 DQ20_RS55890 morA;inference=COORDINATES cyclic di-GMP receptor MorA sig. 38 66
  Synechocystis sp000284455 PCC 6803 SGL_RS03320 EAL domain-containing protein insig. 35 64
  Pseudomonas segetis P6 ACVTMO_RS19720 EAL domain-containing protein strong 37 65
  Pseudomonas sp. S08-1 OH686_11085 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 76
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 35 72
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 35 72
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 35 72
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 34 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 72
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 41 52
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 44 49
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 43 52
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 76
  Acidovorax sp. GW101-3H11 Ac3H11_1725 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 49 41
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 38 65
  Acidovorax sp. GW101-3H11 Ac3H11_3877 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 64
  Synechocystis sp000284455 PCC 6803 SGL_RS11860 EAL domain-containing protein insig. 46 41
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 69
  Cupriavidus basilensis FW507-4G11 RR42_RS10125 diguanylate phosphodiesterase insig. 41 52
  Rhodospirillum rubrum S1H Rru_A3137 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 36 66
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 36 64
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 35 63
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 39 61
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 39 59
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 52
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 64
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 64
  Acidovorax sp. GW101-3H11 Ac3H11_183 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 52
  Dechlorosoma suillum PS Dsui_3161 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein sig. 40 52
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1818 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 40 53
  Acidovorax sp. GW101-3H11 Ac3H11_4670 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 59
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 63
  Dechlorosoma suillum PS Dsui_0506 diguanylate cyclase (GGDEF) domain-containing protein cofit 46 41
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 52
  Dechlorosoma suillum PS Dsui_2547 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 53
  Methylophilus sp. DMC18 GFF623 hypothetical protein insig. 39 52
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 42 49
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 50