| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas putida KT2440 | PP_0355 | | Response regulator | sig. | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS17895 | | response regulator | insig. | 89 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS22765 | | response regulator | insig. | 55 | 78 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2477 | | response regulator | insig. | 54 | 78 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4701 | | Response regulator receiver | no data | 49 | 79 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4701 | | Response regulator receiver | no data | 49 | 79 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1138 | | response regulator | insig. | 54 | 78 |
| | Pseudomonas sp. DMC3 | GFF84 | | Regulatory protein AtoC | no data | 53 | 78 |
| | Pseudomonas orientalis W4I3 | QF045_RS00455 | | response regulator | insig. | 51 | 77 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_14095 | | response regulator | no data | 53 | 77 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS27690 | | response regulator | no data | 50 | 77 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS27690 | | response regulator | insig. | 50 | 77 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_07565 | | response regulator | no data | 51 | 77 |
| | Pseudomonas sp. RS175 | PFR28_04111 | | Regulatory protein AtoC | no data | 53 | 77 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4751 | | response regulator | insig. | 53 | 77 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05330 | | Regulatory protein AtoC | insig. | 51 | 77 |
| | Pseudomonas simiae WCS417 | PS417_26050 | | response regulator | sig. | 50 | 77 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 36 | 74 |
| | Dechlorosoma suillum PS | Dsui_2080 | | response regulator | cofit | 37 | 66 |
| | Pseudomonas segetis P6 | ACVTMO_RS20050 | | response regulator | insig. | 36 | 63 |
| | Pseudomonas orientalis W4I3 | QF045_RS06155 | | response regulator | insig. | 35 | 65 |
| | Pseudomonas segetis P6 | ACVTMO_RS19460 | | sigma-54-dependent transcriptional regulator | cofit | 34 | 64 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05575 | | Fis family transcriptional regulator | strong | 31 | 64 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00240 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | strong | 31 | 64 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2527 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | sig. | 32 | 63 |
| | Caulobacter crescentus NA1000 | CCNA_00795 | | two-component response regulator FixJ | strong | 36 | 61 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00795 | | two-component response regulator FixJ | cofit | 36 | 61 |
| | Pseudomonas sp. RS175 | PFR28_01140 | | Regulator of RpoS | no data | 36 | 59 |
| | Pseudomonas sp. DMC3 | GFF3335 | | Response regulator protein TmoT | cofit | 32 | 61 |
| | Paraburkholderia graminis OAS925 | ABIE53_001365 | | DNA-binding NtrC family response regulator | strong | 31 | 64 |
| | Pseudomonas sp. SVBP6 | COO64_RS09545 | rssB | two-component system response regulator RssB | no data | 38 | 55 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS24605 | | DNA-binding response regulator | no data | 31 | 89 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12850 | | LuxR family transcriptional regulator | no data | 35 | 66 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00464 | | two component transcriptional regulator, LuxR family | no data | 35 | 66 |
| | Paraburkholderia graminis OAS925 | ABIE53_002795 | | FixJ family two-component response regulator | no data | 35 | 66 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS11155 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 39 | 59 |
| | Ralstonia solanacearum GMI1000 | RS_RS14035 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 61 |
| | Pseudomonas sp. BP01 | JOY50_RS25185 | rssB | two-component system response regulator RssB | no data | 38 | 55 |
| | Pseudomonas putida KT2440 | PP_2165 | | Response regulator | no data | 38 | 55 |
| | Pseudomonas sp. DMC3 | GFF3346 | | Regulator of RpoS | cofit | 42 | 46 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS06085 | | sigma-54-dependent Fis family transcriptional regulator | strong | 39 | 59 |
| | Ralstonia solanacearum UW163 | UW163_RS07540 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 59 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS01680 | | DNA-binding response regulator | no data | 36 | 66 |
| | Ralstonia solanacearum UW163 | UW163_RS14990 | | DNA-binding response regulator | no data | 36 | 66 |
| | Klebsiella michiganensis M5al | BWI76_RS14480 | | hypothetical protein | insig. | 35 | 62 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS03150 | | response regulator transcription factor | insig. | 30 | 61 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03150 | | response regulator transcription factor | sig. | 30 | 61 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS01750 | | sigma-54 dependent transcriptional regulator | strong | 38 | 59 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS13480 | | response regulator transcription factor | no data | 37 | 66 |
| | Ralstonia solanacearum GMI1000 | RS_RS08045 | | DNA-binding response regulator | cofit | 37 | 66 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS15805 | | DNA-binding response regulator | no data | 37 | 66 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS23710 | pilR;inference=COORDINATES | two-component system response regulator PilR | strong | 36 | 65 |
| | Pseudomonas sp. S08-1 | OH686_16390 | | Type IV fimbriae expression regulatory protein PilR | cofit | 31 | 66 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_00790 | | two-component response regulator PilR | strong | 36 | 65 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS56175 | pilR;inference=COORDINATES | two-component system response regulator PilR | strong | 36 | 65 |
| | Pseudomonas stutzeri RCH2 | Psest_0705 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 33 | 68 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | insig. | 34 | 65 |
| | Escherichia coli ECOR38 | HEPCGN_10745 | pgtA | two-component system response regulator PgtA | insig. | 33 | 62 |
| | Pseudomonas sp. DMC3 | GFF1302 | | Regulator of RpoS | no data | 36 | 55 |
| | Methylophilus sp. DMC18 | GFF2815 | | Regulatory protein AtoC | insig. | 36 | 62 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15905 | | transcriptional regulator | insig. | 34 | 65 |
| | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 33 | 60 |
| | Pseudomonas simiae WCS417 | PS417_03120 | | histidine kinase | insig. | 34 | 65 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1991 | | response regulator receiver protein (RefSeq) | no data | 37 | 59 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 36 | 55 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07795 | | SpoIIE family protein phosphatase | no data | 36 | 55 |
| | Xanthobacter sp. DMC5 | GFF4834 | | Regulatory protein AtoC | insig. | 31 | 62 |
| | Pseudomonas sp. RS175 | PFR28_03751 | | Regulatory protein AtoC | insig. | 34 | 65 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4408 | | two-component response regulator | insig. | 37 | 62 |
| | Escherichia fergusonii Becca | EFB2_00910 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 32 | 62 |
| | Dechlorosoma suillum PS | Dsui_1581 | | response regulator | strong | 31 | 66 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS24790 | | sigma-54 dependent transcriptional regulator | cofit | 29 | 64 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS16245 | dcuR;go_function=DNA-binding | two-component system response regulator DcuR | insig. | 35 | 58 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_14200 | | transcriptional regulator | insig. | 34 | 66 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_02185 | | chemotaxis protein CheY | no data | 35 | 55 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_13785 | | LuxR family transcriptional regulator | insig. | 30 | 61 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS04170 | | response regulator transcription factor | no data | 37 | 59 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS05715 | | oxygen response regulator transcription factor FixJ | no data | 34 | 66 |
| | Azospirillum brasilense Sp245 | AZOBR_RS14325 | | histidine kinase | cofit | 37 | 58 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2260 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 35 | 55 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS03200 | | response regulator | insig. | 34 | 62 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS03200 | | response regulator | insig. | 34 | 62 |
| | Pseudomonas orientalis W4I3 | QF045_RS06105 | | response regulator transcription factor | cofit | 28 | 61 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4388 | | Response regulator receiver | sig. | 44 | 38 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4388 | | Response regulator receiver | insig. | 44 | 38 |
| | Agrobacterium fabrum C58 | Atu1116 | | two component response regulator | insig. | 38 | 63 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4011 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 35 | 55 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_60 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 35 | 55 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS01375 | | sigma-54 dependent transcriptional regulator | strong | 34 | 62 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1273 | | Response regulator | insig. | 40 | 44 |
| | Pseudomonas segetis P6 | ACVTMO_RS09490 | rssB | two-component system response regulator RssB | no data | 38 | 61 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS15535 | | response regulator | no data | 33 | 61 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_0722 | | Two-component response regulator PilR | insig. | 32 | 66 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0722 | | Two-component response regulator PilR | insig. | 32 | 66 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 32 | 62 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21110 | | two-component system response regulator DcuR | insig. | 35 | 58 |
| | Rhizobium sp. OAE497 | ABIE40_RS30355 | | response regulator | insig. | 38 | 59 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1419 | | signal transduction histidine kinase (RefSeq) | cofit | 35 | 56 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10715 | aruR;inference=COORDINATES | two-component system response regulator AruR | sig. | 35 | 56 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_28620 | | Transcriptional regulatory protein AruR | sig. | 35 | 56 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51345 | aruR;inference=COORDINATES | two-component system response regulator AruR | sig. | 35 | 56 |
| | Xanthobacter sp. DMC5 | GFF483 | | Sensor histidine kinase RcsC | insig. | 31 | 73 |
| | Dechlorosoma suillum PS | Dsui_0809 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | no data | 36 | 62 |
| | Pseudomonas sp. BP01 | JOY50_RS08135 | | response regulator | insig. | 34 | 56 |
| | Pseudomonas simiae WCS417 | PS417_03070 | | LuxR family transcriptional regulator | sig. | 29 | 61 |
| | Shewanella sp. ANA-3 | Shewana3_1372 | | response regulator receiver protein (RefSeq) | strong | 34 | 54 |
| | Azospirillum sp. SherDot2 | MPMX19_00482 | | Sensor histidine kinase RcsC | sig. | 33 | 76 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2818 | | Type IV fimbriae expression regulatory protein PilR | insig. | 31 | 66 |
| | Pseudomonas sp. SVBP6 | COO64_RS18480 | | response regulator transcription factor | insig. | 31 | 61 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 39 | 62 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01676 | | Regulator of RpoS | no data | 35 | 55 |
| | Pseudomonas orientalis W4I3 | QF045_RS10365 | | SpoIIE family protein phosphatase | no data | 35 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS04850 | | sigma-54 dependent transcriptional regulator | strong | 35 | 62 |
| | Pseudomonas segetis P6 | ACVTMO_RS15595 | | sigma-54-dependent transcriptional regulator | strong | 35 | 62 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 34 | 55 |
| | Methylophilus sp. DMC18 | GFF1277 | | Regulatory protein AtoC | insig. | 29 | 68 |
| | Pseudomonas sp. SVBP6 | COO64_RS18445 | | response regulator | insig. | 42 | 37 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS03060 | | SpoIIE family protein phosphatase | no data | 36 | 55 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14160 | | fused response regulator/phosphatase | no data | 36 | 55 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS32530 | rssB;go_process=phosphorelay | two-component system response regulator RssB | no data | 36 | 55 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 36 | 62 |
| | Pseudomonas simiae WCS417 | PS417_07720 | | chemotaxis protein CheY | no data | 35 | 55 |
| | Shewanella sp. ANA-3 | Shewana3_2220 | | response regulator receiver protein (RefSeq) | insig. | 28 | 59 |
| | Pseudomonas stutzeri RCH2 | Psest_2710 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | no data | 39 | 58 |
| | Azospirillum sp. SherDot2 | MPMX19_03583 | | Response regulator protein TodT | no data | 37 | 61 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2537 | | Two-component response regulator | strong | 34 | 61 |
| | Dechlorosoma suillum PS | Dsui_0150 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 30 | 61 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04415 | | sigma-54 dependent transcriptional regulator | cofit | 37 | 64 |
| | Enterobacter sp. TBS_079 | MPMX20_02962 | | Transcriptional regulatory protein DcuR | insig. | 34 | 60 |
| | Rhizobium sp. OAE497 | ABIE40_RS15215 | | response regulator | insig. | 32 | 69 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17870 | | Fis family transcriptional regulator | insig. | 35 | 59 |
| | Variovorax sp. SCN45 | GFF2709 | | hypothetical protein | insig. | 32 | 75 |
| | Pseudomonas sp. BP01 | JOY50_RS23205 | | response regulator transcription factor | insig. | 30 | 63 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4376 | | regulatory protein, LuxR:Response regulator receiver | insig. | 28 | 62 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4376 | | regulatory protein, LuxR:Response regulator receiver | insig. | 28 | 62 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3995 | | Helix-turn-helix, Fis-type | sig. | 34 | 62 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3995 | | Helix-turn-helix, Fis-type | insig. | 34 | 62 |
| | Pseudomonas segetis P6 | ACVTMO_RS19995 | | response regulator transcription factor | insig. | 30 | 56 |
| | Acinetobacter baumannii LAC-4 | RR41_RS08030 | | nitrogen regulation protein NR(I) | insig. | 30 | 62 |
| | Pseudomonas putida KT2440 | PP_0574 | | DNA-binding response regulator, LuxR family | strong | 33 | 61 |
| | Pseudomonas stutzeri RCH2 | Psest_4267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 33 | 66 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01705 | | Fis family transcriptional regulator | insig. | 32 | 62 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 29 | 63 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 34 | 55 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1912 | | Response regulator receiver:Stage II sporulation E | no data | 34 | 55 |
| | Lysobacter sp. OAE881 | ABIE51_RS14390 | | response regulator | insig. | 35 | 65 |
| | Xanthobacter sp. DMC5 | GFF2901 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 34 | 65 |
| | Methylophilus sp. DMC18 | GFF2304 | | Regulatory protein AtoC | cofit | 33 | 62 |
| | Alteromonas macleodii MIT1002 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | cofit | 31 | 62 |
| | Shewanella oneidensis MR-1 | SO3196 | | response regulator (NCBI ptt file) | strong | 31 | 54 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS07490 | | response regulator | no data | 31 | 63 |
| | Pseudomonas sp. DMC3 | GFF4000 | | Regulatory protein AtoC | cofit | 30 | 66 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS43250 | | sigma-54 dependent transcriptional regulator | insig. | 28 | 64 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0064 | | histidine kinase (RefSeq) | sig. | 35 | 56 |
| | Pseudomonas sp. DMC3 | GFF1098 | | Response regulator protein TodT | no data | 35 | 67 |
| | Sinorhizobium meliloti 1021 | SMa1227 | | response regulator FixJ | cofit | 34 | 60 |
| | Azospirillum sp. SherDot2 | MPMX19_04701 | | Transcriptional regulatory protein FixJ | insig. | 37 | 65 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21130 | | Fis family transcriptional regulator | insig. | 36 | 60 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 36 | 62 |
| | Pseudomonas putida KT2440 | PP_3730 | | Transcriptional regulatory protein AruR | insig. | 34 | 56 |
| | Paraburkholderia graminis OAS925 | ABIE53_006369 | | PAS domain S-box-containing protein | sig. | 39 | 64 |
| | Xanthobacter sp. DMC5 | GFF3675 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 36 | 62 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02037 | | two component, sigma54 specific, transcriptional regulator, NtrC subfamily, Fis family | cofit | 33 | 62 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_22040 | | two-component system response regulator PgtA | insig. | 32 | 62 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS17130 | pgtA;go_function=ATP | two-component system response regulator PgtA | insig. | 32 | 62 |
| | Rhodopseudomonas palustris CGA009 | TX73_022010 | | response regulator FixJ | no data | 32 | 62 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 31 | 62 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1282 | | DNA-binding response regulator, LuxR family | insig. | 27 | 61 |
| | Agrobacterium fabrum C58 | Atu4774 | | two component response regulator | insig. | 35 | 60 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10740 | | LuxR family transcriptional regulator | insig. | 31 | 63 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_00484 | | Sigma-54 interaction domain protein | insig. | 28 | 61 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS13130 | | transporter substrate-binding domain-containing protein | insig. | 38 | 61 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20355 | | hybrid sensor histidine kinase/response regulator | insig. | 38 | 61 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48450 | | transporter substrate-binding domain-containing protein | insig. | 38 | 61 |
| | Dickeya dianthicola 67-19 | HGI48_RS20945 | | two-component system response regulator DcuR | insig. | 35 | 57 |
| | Dickeya dianthicola ME23 | DZA65_RS21930 | | two-component system response regulator DcuR | cofit | 35 | 57 |
| | Dechlorosoma suillum PS | Dsui_1707 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | insig. | 34 | 60 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS06700 | | LuxR family transcriptional regulator | insig. | 34 | 63 |
| | Variovorax sp. OAS795 | ABID97_RS14090 | | response regulator transcription factor | cofit | 33 | 62 |
| | Variovorax sp. SCN45 | GFF965 | | Two-component transcriptional response regulator, LuxR family | no data | 33 | 62 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS02520 | | Fis family transcriptional regulator | strong | 32 | 62 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS01490 | | XRE family transcriptional regulator | no data | 32 | 61 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS11680 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 32 | 67 |
| | Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 31 | 58 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_13840 | | histidine kinase | insig. | 39 | 44 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 35 | 57 |
| | Pectobacterium carotovorum WPP14 | HER17_RS00205 | | two-component system response regulator DcuR | cofit | 35 | 57 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 34 | 62 |
| | Marinobacter adhaerens HP15 | HP15_523 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 33 | 62 |
| | Dickeya dadantii 3937 | DDA3937_RS15640 | | two-component system response regulator GlrR | cofit | 32 | 62 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_27655 | | two-component system response regulator DctD | strong | 32 | 67 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS50420 | dctD;inference=COORDINATES | two-component system response regulator DctD | strong | 32 | 67 |
| | Paraburkholderia graminis OAS925 | ABIE53_000395 | | DNA-binding NtrC family response regulator | no data | 31 | 63 |
| | Dickeya dadantii 3937 | DDA3937_RS00450 | | two-component system response regulator DcuR | insig. | 35 | 57 |
| | Dechlorosoma suillum PS | Dsui_0135 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 35 | 62 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03105 | | Signal transduction histidine kinase | insig. | 33 | 65 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0588 | | Response regulator of citrate/malate metabolism | insig. | 33 | 60 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1205 | | Two-component response regulator | strong | 33 | 61 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02234 | | two component transcriptional regulator, Fis family | no data | 31 | 63 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00190 | | response regulator transcription factor EsaR | no data | 34 | 61 |
| | Dickeya dianthicola ME23 | DZA65_RS16815 | | two-component system response regulator GlrR | insig. | 32 | 62 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c13440 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | no data | 30 | 60 |
| | Marinobacter adhaerens HP15 | HP15_1053 | | two component transcriptional regulator, LuxR family | sig. | 37 | 62 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 35 | 62 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 35 | 62 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS11840 | | sigma-54 dependent transcriptional regulator | insig. | 34 | 65 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS12105 | | sigma-54 dependent transcriptional regulator | insig. | 34 | 65 |
| | Pseudomonas sp. S08-1 | OH686_22730 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 34 | 55 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2307 | | Phosphate regulon transcriptional regulatory protein PhoB (SphR) | insig. | 33 | 63 |
| | Azospirillum sp. SherDot2 | MPMX19_00497 | | Sensor histidine kinase RcsC | insig. | 33 | 58 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF610 | | Putative sensory histidine kinase YfhA | insig. | 33 | 67 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1480 | | Fumarate respiration transcriptional regulator DcuR | insig. | 32 | 62 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19020 | | sigma-54 dependent transcriptional regulator | insig. | 30 | 62 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03647 | | Sigma-54 interaction domain protein | cofit | 27 | 62 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4355 | | Flagellar regulatory protein FleQ | sig. | 36 | 61 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3214 | | probable two-component response regulator | insig. | 33 | 56 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_24810 | | transcriptional regulator | insig. | 32 | 59 |
| | Dickeya dianthicola 67-19 | HGI48_RS15735 | | two-component system response regulator GlrR | insig. | 32 | 62 |
| | Azospirillum brasilense Sp245 | AZOBR_RS23775 | | LuxR family transcriptional regulator | no data | 36 | 65 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS14210 | | response regulator | no data | 36 | 59 |
| | Pectobacterium carotovorum WPP14 | HER17_RS11050 | | two-component system response regulator RssB | cofit | 35 | 63 |
| | Rahnella sp. WP5 | EX31_RS24560 | | two-component system response regulator PhoP | insig. | 34 | 58 |
| | Rahnella sp. WP5 | EX31_RS01180 | | two-component system response regulator DcuR | insig. | 34 | 58 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS17200 | | DNA-binding response regulator | cofit | 33 | 62 |
| | Shewanella loihica PV-4 | Shew_2803 | | DNA-binding transcriptional regulator TorR (RefSeq) | insig. | 33 | 62 |
| | Paraburkholderia graminis OAS925 | ABIE53_000648 | | two-component system C4-dicarboxylate transport response regulator DctD | insig. | 32 | 62 |
| | Dechlorosoma suillum PS | Dsui_1912 | | response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain protein | no data | 30 | 59 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17625 | | Nodulation protein W | no data | 29 | 61 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3303 | lon | ATP-dependent protease La, truncation (TIGR) | cofit | 37 | 60 |
| | Pseudomonas sp. SVBP6 | COO64_RS21035 | | response regulator | insig. | 34 | 56 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2346 | | response regulator receiver protein (RefSeq) | cofit | 31 | 60 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1489 | | Type IV fimbriae expression regulatory protein PilR | insig. | 31 | 63 |
| | Klebsiella michiganensis M5al | BWI76_RS16090 | | two-component system response regulator DcuR | insig. | 36 | 58 |
| | Azospirillum sp. SherDot2 | MPMX19_00002 | | Response regulator PleD | insig. | 34 | 57 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | strong | 31 | 58 |
| | Ralstonia solanacearum UW163 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | strong | 31 | 58 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS17425 | | hybrid sensor histidine kinase/response regulator | insig. | 38 | 56 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2967 | | sensor histidine kinase/response regulator (TIGR) | sig. | 36 | 62 |
| | Cellulophaga baltica 18 | M666_RS11915 | | response regulator | insig. | 33 | 57 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1544 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 32 | 62 |
| | Caulobacter crescentus NA1000 | CCNA_01426 | | chemotaxis receiver domain protein cheYIII | insig. | 32 | 60 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_01426 | | chemotaxis receiver domain protein cheYIII | cofit | 32 | 60 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS07355 | | LuxR family transcriptional regulator | no data | 32 | 62 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS23515 | | sigma-54 dependent transcriptional regulator | strong | 31 | 58 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_16850 | | hybrid sensor histidine kinase/response regulator | cofit | 31 | 69 |
| | Pseudomonas orientalis W4I3 | QF045_RS21945 | | sigma-54 dependent transcriptional regulator | insig. | 35 | 60 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24030 | | chemotaxis protein CheY | no data | 34 | 61 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS07980 | | nitrogen regulation protein NR(I) | strong | 33 | 66 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 32 | 67 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS19345 | | sigma-54 dependent transcriptional regulator | no data | 30 | 62 |