Homologs of PFLU_RS29445 from Pseudomonas fluorescens SBW25-INTG

JAB domain-containing protein
SEED: DNA repair protein RadC
KEGG: DNA repair protein RadC

Top 100 hits from BLASTp (E < 0.01)

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Orth	Species	Gene	Name	Description	Fitness	%Id	Cov
o	Pseudomonas fluorescens SBW25	PFLU_RS29445		JAB domain-containing protein	insig.	100	100
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS29445		JAB domain-containing protein	insig.	100	100
o	Pseudomonas simiae WCS417	PS417_27770		hypothetical protein	insig.	97	100
o	Pseudomonas fluorescens FW300-N2E3	AO353_09220		hypothetical protein	insig.	83	100
o	Pseudomonas fluorescens FW300-N1B4	Pf1N1B4_2126		DNA repair protein RadC	insig.	80	100
o	Pseudomonas sp. RS175	PFR28_04412		hypothetical protein	insig.	81	100
o	Pseudomonas stutzeri RCH2	Psest_3803		DNA repair protein radc	insig.	79	100
o	Pseudomonas fluorescens FW300-N2C3	AO356_12545		hypothetical protein	insig.	75	100
o	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_4377		DNA repair protein RadC	insig.	75	100
o	Pseudomonas fluorescens GW456-L13	PfGW456L13_798		DNA repair protein RadC	insig.	78	100
o	Pseudomonas syringae pv. syringae B728a	Psyr_0222		DNA replication and repair protein RadC	insig.	74	100
o	Pseudomonas syringae pv. syringae B728a ΔmexB	Psyr_0222		DNA replication and repair protein RadC	insig.	74	100
o	Pseudomonas sp. S08-1	OH686_13620		UPF0758 family protein	insig.	78	100
o	Pseudomonas putida KT2440	PP_5284		UPF0758 protein PP_5284	sig.	63	100
o	Ralstonia solanacearum IBSBF1503	RALBFv3_RS04710		JAB domain-containing protein	insig.	58	99
o	Ralstonia solanacearum UW163	UW163_RS08960		JAB domain-containing protein	insig.	58	99
o	Ralstonia solanacearum PSI07	RPSI07_RS12675		JAB domain-containing protein	insig.	58	99
o	Kangiella aquimarina DSM 16071	B158DRAFT_0781		DNA repair protein radc	insig.	56	100
o	Ralstonia solanacearum GMI1000	RS_RS12270		JAB domain-containing protein	insig.	58	99
o	Shewanella amazonensis SB2B	Sama_0327	radC	DNA repair protein RadC (RefSeq)	cofit	56	100
o	Ralstonia sp. UNC404CL21Col	ABZR87_RS00330		DNA repair protein RadC	insig.	56	99
o	Rhodanobacter denitrificans MT42	LRK55_RS08695		DNA repair protein RadC	insig.	55	100
o	Rhodanobacter denitrificans FW104-10B01	LRK54_RS09165		DNA repair protein RadC	insig.	55	100
o	Marinobacter adhaerens HP15	HP15_3321		DNA repair protein RadC-like protein	insig.	56	100
o	Dyella japonica UNC79MFTsu3.2	ABZR86_RS15615		DNA repair protein RadC	insig.	53	100
o	Cupriavidus basilensis FW507-4G11	RR42_RS16995		hypothetical protein	insig.	54	100
o	Shewanella loihica PV-4	Shew_3481		DNA repair protein RadC (RefSeq)	insig.	53	100
o	Vibrio cholerae E7946 ATCC 55056	CSW01_01155		DNA repair protein RadC	insig.	57	100
o	Dechlorosoma suillum PS	Dsui_1537		DNA repair protein radc	cofit	54	100
o	Rhodanobacter sp. FW510-T8	OKGIIK_15660	radC	DNA repair protein RadC	insig.	54	100
o	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.4897.1		DNA repair protein RadC	insig.	53	100
o	Paraburkholderia sabiae LMG 24235	QEN71_RS03085		DNA repair protein RadC	insig.	47	97
o	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF1170		DNA repair protein RadC	insig.	51	99
o	Shewanella sp. ANA-3	Shewana3_3770	radC	DNA repair protein RadC (RefSeq)	strong	54	100
o	Shewanella oneidensis MR-1	SO4248	radC	DNA repair protein RadC (NCBI ptt file)	strong	54	100
o	Lysobacter sp. OAE881	ABIE51_RS00095		DNA repair protein RadC	insig.	54	100
o	Serratia liquefaciens MT49	IAI46_24825		DNA repair protein RadC	cofit	48	99
o	Pantoea sp. MT58	IAI47_00620		DNA repair protein RadC	insig.	50	95
o	Paraburkholderia graminis OAS925	ABIE53_003289		DNA repair protein RadC	insig.	46	98
o	Alteromonas macleodii MIT1002	MIT1002_00049		DNA repair protein RadC	insig.	47	100
o	Paraburkholderia bryophila 376MFSha3.1	H281DRAFT_04066		DNA replication and repair protein RadC	insig.	45	98
o	Variovorax sp. OAS795	ABID97_RS07700		DNA repair protein RadC	insig.	54	100
o	Herbaspirillum seropedicae SmR1	HSERO_RS05945		hypothetical protein	insig.	48	100
o	Dickeya dianthicola 67-19	HGI48_RS00700		DNA repair protein RadC	insig.	46	98
o	Dickeya dianthicola ME23	DZA65_RS00755		JAB domain-containing protein	insig.	46	98
o	Rahnella sp. WP5	EX31_RS14470		JAB domain-containing protein	insig.	48	98
o	Escherichia coli ECOR27	NOLOHH_07500	radC	DNA repair protein RadC	cofit	46	95
o	Escherichia coli ECRC62	BNILDI_04015	radC	DNA repair protein RadC	cofit	46	95
o	Escherichia fergusonii Becca	EFB2_00175		hypothetical protein	insig.	46	95
o	Escherichia coli ECOR38	HEPCGN_14445	radC	DNA repair protein RadC	insig.	46	95
o	Escherichia coli ECRC100	OKFHMN_15620	radC	DNA repair protein RadC	insig.	46	95
o	Escherichia coli ECRC101	MCAODC_06130	radC	DNA repair protein RadC	cofit	46	95
o	Escherichia coli ECRC102	NIAGMN_13380	radC	DNA repair protein RadC	insig.	46	95
o	Escherichia coli ECRC98	JDDGAC_19245	radC	DNA repair protein RadC	cofit	46	95
o	Escherichia coli ECRC99	KEDOAH_12530	radC	DNA repair protein RadC	no data	46	95
o	Escherichia coli Nissle 1917	ECOLIN_RS20730		DNA repair protein RadC	insig.	46	95
o	Escherichia coli BW25113	b3638	radC	DNA repair protein (VIMSS)	insig.	46	95
o	Dickeya dadantii 3937	DDA3937_RS20515		DNA repair protein RadC	insig.	46	98
o	Escherichia coli BL21	ECD_03495		UPF0758 family protein	insig.	46	95
o	Escherichia coli HS(pFamp)R (ATCC 700891)	OHPLBJKB_00064		hypothetical protein	insig.	46	95
o	Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868	GFF371		DNA repair protein RadC	insig.	48	95
o	Burkholderia phytofirmans PsJN	BPHYT_RS15625		hypothetical protein	insig.	46	97
o	Pectobacterium carotovorum WPP14	HER17_RS20830		DNA repair protein RadC	insig.	46	98
o	Variovorax sp. SCN45	GFF5700		UPF0758 family protein	insig.	51	100
o	Enterobacter asburiae PDN3	EX28DRAFT_3888		DNA repair protein radc	insig.	45	95
o	Acidovorax sp. GW101-3H11	Ac3H11_1774		DNA repair protein RadC	insig.	49	100
o	Klebsiella michiganensis M5al	BWI76_RS27365		hypothetical protein	insig.	45	95
o	Erwinia tracheiphila SCR3	LU632_RS21995	radC	DNA repair protein RadC	insig.	46	95
o	Enterobacter sp. TBS_079	MPMX20_00097		hypothetical protein	insig.	44	95
o	Acinetobacter radioresistens SK82	MPMX26_02636		hypothetical protein	no data	43	99
o	Castellaniella sp019104865 MT123	ABCV34_RS00910		DNA repair protein RadC	insig.	47	97
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_967		DNA repair protein RadC	insig.	58	66
	Pseudomonas fluorescens SBW25	PFLU_RS09700		DNA repair protein RadC	insig.	64	54
	Pseudomonas fluorescens SBW25-INTG	PFLU_RS09700		DNA repair protein RadC	insig.	64	54
	Ralstonia solanacearum GMI1000	RS_RS13130		DNA repair protein RadC	insig.	48	65
	Castellaniella sp019104865 MT123	ABCV34_RS15885		DNA repair protein RadC	insig.	49	67
	Variovorax sp. SCN45	GFF4374		UPF0758 family protein	insig.	47	65
o	Pontibacter actiniarum KMM 6156, DSM 19842	CA264_13835		hypothetical protein	insig.	37	100
	Shewanella loihica PV-4	Shew_1257		DNA repair protein RadC (RefSeq)	insig.	53	63
o	Phocaeicola vulgatus CL09T03C04	HMPREF1058_RS08525		DNA repair protein RadC	cofit	36	99
	Pseudomonas fluorescens FW300-N2E2	Pf6N2E2_1996		DNA repair protein RadC	insig.	53	54
	Shewanella sp. ANA-3	Shewana3_1252		DNA repair protein RadC (RefSeq)	insig.	47	65
o	Phocaeicola dorei CL03T12C01	ABI39_RS02750		DNA repair protein RadC	insig.	36	99
	Hydrogenophaga sp. GW460-11-11-14-LB1	GFF3498		DNA repair protein RadC	insig.	47	67
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.2520.1		DNA repair protein RadC	insig.	56	54
o	Bacteroides ovatus ATCC 8483	BACOVA_03503		DNA repair protein RadC	insig.	35	100
o	Bacteroides thetaiotaomicron VPI-5482	BT3695		putative DNA repair protein (NCBI ptt file)	insig.	34	100
	Vibrio cholerae E7946 ATCC 55056	CSW01_08960		DNA repair protein RadC	insig.	49	63
	Xanthomonas campestris pv. campestris strain 8004	Xcc-8004.3244.1		DNA repair protein RadC	insig.	48	63
	Vibrio cholerae E7946 ATCC 55056	CSW01_02700		hypothetical protein	insig.	48	64
	Sinorhizobium meliloti 1021	SMc00299		DNA repair protein RadC	insig.	41	91
	Rhizobium sp. OAE497	ABIE40_RS08620		DNA repair protein RadC	cofit	40	91
	Ralstonia solanacearum UW163	UW163_RS24075		DNA repair protein RadC	insig.	45	68
	Klebsiella michiganensis M5al	BWI76_RS21670		hypothetical protein	no data	45	68
	Klebsiella michiganensis M5al	BWI76_RS10145		hypothetical protein	no data	44	68
o	Brevundimonas sp. GW460-12-10-14-LB2	A4249_RS00510		DNA repair protein RadC	insig.	37	96
o	Bacteroides stercoris CC31F	HMPREF1181_RS03225		DNA repair protein RadC	insig.	36	100
o	Phaeobacter inhibens DSM 17395	PGA1_c34550		DNA repair protein RadC	insig.	36	96
	Shewanella oneidensis MR-1	SO1455		DNA repair protein, RadC family (NCBI ptt file)	insig.	48	63
	Escherichia coli Nissle 1917	ECOLIN_RS21030		DNA repair protein RadC	insig.	46	69