Homologs of HSERO_RS01560 from Herbaspirillum seropedicae SmR1

transporter
SEED: RND efflux system, inner membrane transporter CmeB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS01560 transporter insig. 100 100
o Dechlorosoma suillum PS Dsui_2026 hydrophobe/amphiphile efflux-1 (HAE1) family transporter cofit 84 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS20105 efflux RND transporter permease subunit cofit 80 99
o Burkholderia phytofirmans PsJN BPHYT_RS22515 multidrug efflux RND transporter permease subunit strong 81 99
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03190 multidrug efflux pump insig. 81 99
o Paraburkholderia graminis OAS925 ABIE53_004106 multidrug efflux pump strong 81 99
o Azospirillum brasilense Sp245 AZOBR_RS28205 transporter insig. 77 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS19400 efflux RND transporter permease subunit insig. 79 97
o Ralstonia solanacearum PSI07 RPSI07_RS05175 multidrug efflux RND transporter permease subunit strong 79 98
o Ralstonia solanacearum UW163 UW163_RS20755 multidrug efflux RND transporter permease subunit insig. 79 98
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS18375 multidrug efflux RND transporter permease subunit strong 78 98
o Azospirillum sp. SherDot2 MPMX19_02968 multidrug efflux RND transporter permease subunit OqxB28 insig. 77 99
o Ralstonia solanacearum GMI1000 RS_RS22490 multidrug efflux RND transporter permease subunit strong 78 97
o Cupriavidus basilensis FW507-4G11 RR42_RS27685 multidrug efflux RND transporter permease subunit sig. 77 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS37930 multidrug efflux RND transporter permease subunit insig. 75 98
o Acidovorax sp. GW101-3H11 Ac3H11_258 RND multidrug efflux transporter; Acriflavin resistance protein insig. 71 100
o Variovorax sp. SCN45 GFF429 RND efflux system, inner membrane transporter insig. 70 99
o Magnetospirillum magneticum AMB-1 AMB_RS09480 multidrug efflux RND transporter permease subunit cofit 70 98
o Variovorax sp. OAS795 ABID97_RS17350 efflux RND transporter permease subunit insig. 70 99
o Rhizobium sp. OAE497 ABIE40_RS14875 multidrug efflux RND transporter permease subunit insig. 70 99
o Pseudomonas sp. RS175 PFR28_02013 multidrug efflux RND transporter permease subunit OqxB10 insig. 69 97
o Rhodospirillum rubrum S1H Rru_A0886 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) insig. 69 98
o Sinorhizobium meliloti 1021 SMc01095 multidrug-efflux system transmembrane protein insig. 71 99
o Agrobacterium fabrum C58 Atu2483 AcrB/AcrD/AcrF family protein strong 70 97
o Pseudomonas syringae pv. syringae B728a Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 sig. 65 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2968 Hydrophobe/amphiphile efflux-1 HAE1 strong 65 98
o Pseudomonas fluorescens FW300-N2C3 AO356_27605 transporter strong 65 97
o Pseudomonas putida KT2440 PP_3426 Multidrug efflux RND transporter MexF sig. 66 98
o Pseudomonas simiae WCS417 PS417_13190 transporter insig. 65 97
o Pseudomonas fluorescens SBW25 PFLU_RS14260 efflux RND transporter permease subunit insig. 64 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14260 efflux RND transporter permease subunit insig. 64 97
  Pseudomonas sp. RS175 PFR28_01728 multidrug efflux RND transporter permease subunit OqxB27 insig. 65 97
o Pseudomonas fluorescens FW300-N2E3 AO353_23960 transporter sig. 65 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3060 Multidrug efflux transporter MexF insig. 64 97
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08140 multidrug efflux RND transporter permease subunit insig. 67 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4864 Multidrug efflux transporter MexF insig. 65 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_824 Multidrug efflux transporter MexF strong 65 97
o Rhodanobacter denitrificans MT42 LRK55_RS07890 efflux RND transporter permease subunit cofit 66 97
o Rhodanobacter sp. FW510-T8 OKGIIK_14955 oqxB multidrug efflux RND transporter permease subunit insig. 66 97
o Pseudomonas stutzeri RCH2 Psest_2144 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family sig. 64 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_948 Multidrug efflux transporter MexF insig. 63 98
o Pseudomonas sp. S08-1 OH686_01005 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 64 98
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15400 efflux RND transporter permease subunit cofit 66 97
o Shewanella oneidensis MR-1 SO3492 mexF RND multidrug efflux transporter MexF (NCBI ptt file) insig. 64 97
o Shewanella sp. ANA-3 Shewana3_1078 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) cofit 64 97
o Alteromonas macleodii MIT1002 MIT1002_02998 Efflux pump membrane transporter BepE insig. 64 97
o Pantoea sp. MT58 IAI47_10310 multidrug efflux RND transporter permease subunit OqxB insig. 62 98
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4246 RND efflux system, inner membrane transporter CmeB insig. 59 98
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3477.1 RND efflux system, inner membrane transporter CmeB insig. 62 97
o Klebsiella michiganensis M5al BWI76_RS12955 multidrug efflux RND transporter permease subunit OqxB sig. 61 97
o Rahnella sp. WP5 EX31_RS01495 multidrug efflux RND transporter permease subunit insig. 61 97
o Enterobacter sp. TBS_079 MPMX20_01155 multidrug efflux RND transporter permease subunit OqxB3 insig. 61 97
o Enterobacter asburiae PDN3 EX28DRAFT_1472 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family cofit 61 97
o Serratia liquefaciens MT49 IAI46_13385 efflux RND transporter permease subunit insig. 59 98
  Serratia liquefaciens MT49 IAI46_09925 multidrug efflux RND transporter permease subunit SdeB insig. 61 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0436 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 60 98
o Lysobacter sp. OAE881 ABIE51_RS01060 multidrug efflux RND transporter permease subunit cofit 60 99
  Sinorhizobium meliloti 1021 SMc03971 multidrug-efflux system transmembrane protein insig. 52 97
  Rhizobium sp. OAE497 ABIE40_RS14935 efflux RND transporter permease subunit insig. 52 97
  Magnetospirillum magneticum AMB-1 AMB_RS17325 multidrug efflux RND transporter permease subunit insig. 52 97
  Azospirillum brasilense Sp245 AZOBR_RS16485 RND transporter insig. 52 99
  Paraburkholderia graminis OAS925 ABIE53_002687 hydrophobe/amphiphile efflux-1 (HAE1) family protein sig. 50 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1850 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 51 97
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09925 multidrug efflux RND transporter permease subunit strong 50 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2163 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) strong 49 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU0061 multidrug resistance protein, putative (TIGR) strong 48 98
o Shewanella loihica PV-4 Shew_1164 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 47 97
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3519 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 51 98
  Desulfovibrio vulgaris Hildenborough JW710 DVU3248 AcrB/AcrD/AcrF family protein (TIGR) insig. 48 97
  Pseudomonas sp. S08-1 OH686_07370 RND efflux system, inner membrane transporter cofit 46 97
  Desulfovibrio vulgaris Miyazaki F DvMF_0036 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family (RefSeq) insig. 47 98
  Burkholderia phytofirmans PsJN BPHYT_RS20640 multidrug efflux RND transporter permease subunit insig. 44 98
  Paraburkholderia graminis OAS925 ABIE53_005788 multidrug efflux pump insig. 44 97
  Dechlorosoma suillum PS Dsui_1871 hydrophobe/amphiphile efflux-1 (HAE1) family transporter strong 44 99
  Rhizobium sp. OAE497 ABIE40_RS23875 multidrug efflux RND transporter permease subunit insig. 45 97
  Sinorhizobium meliloti 1021 SMa1662 Cation/multidrug efflux pump insig. 43 97
  Sinorhizobium meliloti 1021 SM_b21498 acriflavin resistance protein insig. 46 98
  Marinobacter adhaerens HP15 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family insig. 43 97
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_03655 multidrug efflux RND transporter permease subunit strong 44 97
  Rhodopseudomonas palustris CGA009 TX73_015325 efflux RND transporter permease subunit insig. 42 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3740 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 43 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04170 multidrug efflux pump strong 43 98
  Burkholderia phytofirmans PsJN BPHYT_RS16170 multidrug efflux RND transporter permease subunit no data 43 98
  Herbaspirillum seropedicae SmR1 HSERO_RS02410 acriflavine resistance protein B strong 43 98
  Pseudomonas stutzeri RCH2 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family strong 43 98
  Enterobacter asburiae PDN3 EX28DRAFT_0191 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family insig. 42 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02440 multidrug efflux RND transporter permease subunit insig. 43 97
  Pseudomonas sp. S08-1 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) cofit 43 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS03455 multidrug efflux RND transporter permease subunit insig. 45 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS09205 multidrug efflux RND transporter permease subunit no data 45 97
  Phocaeicola dorei CL03T12C01 ABI39_RS01690 multidrug efflux RND transporter permease subunit insig. 43 97
  Paraburkholderia graminis OAS925 ABIE53_003408 multidrug efflux pump strong 43 98
  Shewanella sp. ANA-3 Shewana3_4045 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) strong 43 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU2816 multidrug resistance protein (TIGR) sig. 43 97
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB strong 42 98
  Burkholderia phytofirmans PsJN BPHYT_RS29005 transporter insig. 44 97
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12545 efflux RND transporter permease subunit cofit 42 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01393 hydrophobic/amphiphilic exporter-1, HAE1 family insig. 43 98
  Shewanella loihica PV-4 Shew_3796 hydrophobe/amphiphile efflux-1 (HAE1) family protein (RefSeq) insig. 43 97
  Escherichia fergusonii Becca EFB2_01418 Multidrug efflux pump subunit AcrB insig. 41 97