Homologs of HMPREF1058_RS17680 from Phocaeicola vulgatus CL09T03C04

AMP-binding protein
SEED: Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
KEGG: fatty-acyl-CoA synthase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17680 AMP-binding protein insig. 100 100
o Phocaeicola dorei CL03T12C01 ABI39_RS13880 AMP-binding protein insig. 99 100
o Bacteroides thetaiotaomicron VPI-5482 BT2782 long-chain-fatty-acid--CoA ligase (NCBI ptt file) insig. 85 100
o Bacteroides stercoris CC31F HMPREF1181_RS01205 AMP-binding protein insig. 86 100
o Bacteroides ovatus ATCC 8483 BACOVA_01082 AMP-binding domain protein insig. 85 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS17565 AMP-binding protein insig. 81 99
o Methanococcus maripaludis JJ MMJJ_RS02080 AMP-binding protein insig. 62 99
o Methanococcus maripaludis S2 MMP_RS02990 AMP-binding protein insig. 62 98
o Desulfovibrio vulgaris Miyazaki F DvMF_2357 AMP-binding domain protein (RefSeq) sig. 56 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU3065 AMP-binding enzyme family protein (TIGR) insig. 56 97
o Marinobacter adhaerens HP15 HP15_999 acyl-CoA synthase insig. 47 98
o Shewanella oneidensis MR-1 SO1971 AMP-binding family protein (NCBI ptt file) insig. 48 97
o Pseudomonas putida KT2440 PP_3458 Butyrate--CoA ligase sig. 44 100
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4967 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 45 97
o Shewanella sp. ANA-3 Shewana3_2475 AMP-binding domain protein (RefSeq) insig. 47 97
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2190 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 44 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3988 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 44 97
o Cupriavidus basilensis FW507-4G11 RR42_RS26915 AMP-binding protein strong 46 98
o Acidovorax sp. GW101-3H11 Ac3H11_3009 Acetoacetate--CoA ligase (EC 6.2.1.16) (from data) strong 47 97
o Azospirillum sp. SherDot2 MPMX19_03344 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase insig. 46 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02398 fatty-acyl-CoA synthase sig. 46 97
o Pseudomonas fluorescens FW300-N2E3 AO353_20355 AMP-binding protein insig. 44 98
o Shewanella loihica PV-4 Shew_2593 acyl-CoA synthetase (RefSeq) insig. 45 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2593 Acetoacetyl-CoA synthetase (EC 6.2.1.16) / Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 44 99
o Pseudomonas sp. RS175 PFR28_01261 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase insig. 43 99
o Burkholderia phytofirmans PsJN BPHYT_RS19375 AMP-binding protein insig. 46 97
o Pseudomonas fluorescens FW300-N2C3 AO356_01575 AMP-binding protein insig. 43 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS07325 AMP-binding protein insig. 45 95
o Paraburkholderia graminis OAS925 ABIE53_000249 fatty-acyl-CoA synthase sig. 45 99
o Shewanella amazonensis SB2B Sama_1904 AMP-binding domain protein (RefSeq) insig. 46 98
o Pseudomonas stutzeri RCH2 Psest_1086 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II insig. 44 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS29275 AMP-binding protein insig. 45 97
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07945 AMP-binding protein insig. 44 97
o Ralstonia solanacearum GMI1000 RS_RS02190 AMP-binding protein insig. 44 95
o Ralstonia solanacearum PSI07 RPSI07_RS21845 AMP-binding protein insig. 44 98
o Variovorax sp. OAS795 ABID97_RS25135 AMP-binding protein insig. 46 98
o Variovorax sp. SCN45 GFF2007 Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16) insig. 45 98
o Pseudomonas fluorescens SBW25 PFLU_RS18960 AMP-binding protein cofit 43 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS18960 AMP-binding protein insig. 43 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS11360 AMP-binding protein sig. 43 98
o Ralstonia solanacearum UW163 UW163_RS02225 AMP-binding protein insig. 43 98
  Pseudomonas putida KT2440 PP_4063 putative Long-chain-fatty-acid-CoA ligase strong 43 98
o Pseudomonas simiae WCS417 PS417_17010 AMP-binding protein insig. 43 98
o Rhodanobacter denitrificans MT42 LRK55_RS08165 AMP-binding protein insig. 43 96
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08400 AMP-binding protein insig. 43 96
o Alteromonas macleodii MIT1002 MIT1002_03360 Long-chain-fatty-acid--CoA ligase insig. 44 99
o Mycobacterium tuberculosis H37Rv Rv2505c Probable fatty-acid-CoA ligase FadD35 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) insig. 43 98
o Rhodanobacter sp. FW510-T8 OKGIIK_15170 AMP-binding protein insig. 44 97
o Dinoroseobacter shibae DFL-12 Dshi_3403 AMP-dependent synthetase and ligase (RefSeq) cofit 43 97
o Acinetobacter radioresistens SK82 MPMX26_00634 3-[(3aS,4S,7aS)-7a-methyl-1, 5-dioxo-octahydro-1H-inden-4-yl]propanoyl:CoA ligase insig. 42 97
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0771 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II insig. 41 99
o Rhodopseudomonas palustris CGA009 TX73_002405 AMP-binding protein insig. 35 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS30535 AMP-binding protein insig. 33 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2521 Long-chain fatty-acid-CoA ligase (EC 6.2.1.3), Mycobacterial subgroup FadD3 insig. 31 93
  Cupriavidus basilensis FW507-4G11 RR42_RS31975 fatty acid--CoA ligase insig. 33 87
  Mycobacterium tuberculosis H37Rv Rv3561 Probable fatty-acid-CoA ligase FadD3 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) sig. 32 97
o Castellaniella sp019104865 MT123 ABCV34_RS01395 class I adenylate-forming enzyme family protein cofit 33 96
  Cupriavidus basilensis FW507-4G11 RR42_RS29485 fatty-acid--CoA ligase insig. 31 89
  Rhodopseudomonas palustris CGA009 TX73_003840 long-chain fatty acid--CoA ligase insig. 31 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5648 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 33 91
  Desulfovibrio vulgaris Miyazaki F DvMF_0256 AMP-dependent synthetase and ligase (RefSeq) sig. 31 95
o Sinorhizobium meliloti 1021 SMa0150 malonyl-CoA synthase insig. 31 94
  Cupriavidus basilensis FW507-4G11 RR42_RS28980 fatty acid--CoA ligase insig. 29 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3540 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 31 98
  Cupriavidus basilensis FW507-4G11 RR42_RS29430 acyl-CoA synthetase insig. 31 86
  Cupriavidus basilensis FW507-4G11 RR42_RS36410 acyl-CoA synthetase insig. 31 96
o Rhodospirillum rubrum S1H Rru_A1312 AMP-dependent synthetase and ligase (NCBI) sig. 31 94
  Marinobacter adhaerens HP15 HP15_4144 short chain acyl-CoA synthetase cofit 30 97
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5470 Benzoate-CoA ligase (EC 6.2.1.25) insig. 30 96
o Serratia liquefaciens MT49 IAI46_12690 long-chain fatty acid--CoA ligase insig. 30 96
o Escherichia coli ECRC100 OKFHMN_27150 fadK medium-chain fatty-acid--CoA ligase cofit 30 96
o Escherichia coli ECRC102 NIAGMN_00915 fadK medium-chain fatty-acid--CoA ligase insig. 30 96
o Escherichia coli ECRC98 JDDGAC_01725 fadK medium-chain fatty-acid--CoA ligase cofit 30 96
o Escherichia coli ECRC99 KEDOAH_00960 fadK medium-chain fatty-acid--CoA ligase no data 30 96
  Paraburkholderia graminis OAS925 ABIE53_001499 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II insig. 31 98
o Caulobacter crescentus NA1000 CCNA_01382 long-chain-fatty-acid--CoA ligase insig. 31 95
o Caulobacter crescentus NA1000 Δfur CCNA_01382 long-chain-fatty-acid--CoA ligase cofit 31 95
o Escherichia coli ECOR38 HEPCGN_05535 fadK medium-chain fatty-acid--CoA ligase insig. 30 99
  Variovorax sp. SCN45 GFF2647 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 30 94
  Cupriavidus basilensis FW507-4G11 RR42_RS12470 long-chain fatty acid--CoA ligase insig. 30 96
o Escherichia coli ECOR27 NOLOHH_17670 fadK medium-chain fatty-acid--CoA ligase cofit 30 96
  Pseudomonas stutzeri RCH2 Psest_2477 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II insig. 27 96
  Sinorhizobium meliloti 1021 SMc00261 acyl-CoA synthetase insig. 31 99
o Escherichia coli BL21 ECD_01670 short chain acyl-CoA synthetase, anaerobic no data 30 99
o Escherichia coli BW25113 b1701 fadK short chain acyl-CoA synthetase, anaerobic (RefSeq) insig. 30 96
o Escherichia fergusonii Becca EFB2_02290 Medium-chain fatty-acid--CoA ligase insig. 30 96
  Cupriavidus basilensis FW507-4G11 RR42_RS16820 fatty-acid--CoA ligase insig. 30 96
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03490 fatty-acyl-CoA synthase insig. 30 96
o Escherichia coli Nissle 1917 ECOLIN_RS09505 medium-chain fatty-acid--CoA ligase insig. 30 96
  Azospirillum sp. SherDot2 MPMX19_02151 Long-chain-fatty-acid--CoA ligase cofit 29 97
  Variovorax sp. OAS795 ABID97_RS11345 class I adenylate-forming enzyme family protein insig. 31 96
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0835 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II insig. 30 95
o Agrobacterium fabrum C58 Atu4822 acyl-CoA synthetase insig. 31 96
o Escherichia coli ECRC62 BNILDI_16460 fadK medium-chain fatty-acid--CoA ligase cofit 30 94
  Variovorax sp. OAS795 ABID97_RS28255 long-chain-fatty-acid--CoA ligase insig. 29 96
  Desulfovibrio vulgaris Hildenborough JW710 DVU1453 fadD long-chain-fatty-acid--CoA ligase (TIGR) insig. 29 95
  Acidovorax sp. GW101-3H11 Ac3H11_4478 Acetyl-coenzyme A synthetase (EC 6.2.1.1) insig. 29 97
o Azospirillum brasilense Sp245 AZOBR_RS31155 AMP-dependent synthetase insig. 28 99
  Variovorax sp. SCN45 GFF2098 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) insig. 30 92
o Bosea sp. OAE506 ABIE41_RS21945 malonyl-CoA synthase insig. 28 95