Homologs of hofQ from Escherichia coli ECOR38

hofQ: DNA uptake porin HofQ
SEED: Type IV pilus biogenesis protein PilQ
KEGG: protein transport protein HofQ

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Escherichia coli ECOR38 HEPCGN_15925 hofQ DNA uptake porin HofQ insig. 100 100
o Escherichia coli ECRC100 OKFHMN_17105 hofQ DNA uptake porin HofQ cofit 100 100
o Escherichia coli ECRC101 MCAODC_07635 hofQ DNA uptake porin HofQ insig. 100 100
o Escherichia coli ECRC102 NIAGMN_14875 hofQ DNA uptake porin HofQ cofit 100 100
o Escherichia coli ECRC98 JDDGAC_20735 hofQ DNA uptake porin HofQ insig. 100 100
o Escherichia coli ECRC99 KEDOAH_11035 hofQ DNA uptake porin HofQ no data 100 100
o Escherichia coli Nissle 1917 ECOLIN_RS19370 DNA uptake porin HofQ insig. 99 100
o Escherichia coli BW25113 b3391 hofQ predicted fimbrial transporter (NCBI) strong 99 100
o Escherichia coli ECRC62 BNILDI_02625 hofQ DNA uptake porin HofQ cofit 99 100
o Escherichia coli BL21 ECD_03243 DNA catabolic putative fimbrial transporter cofit 99 100
o Escherichia coli ECOR27 NOLOHH_08895 hofQ DNA uptake porin HofQ insig. 99 100
o Escherichia fergusonii Becca EFB2_00437 Type IV pilus biogenesis and competence protein PilQ insig. 98 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00312 Type IV pilus biogenesis and competence protein PilQ insig. 99 100
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF628 Type IV pilus biogenesis protein PilQ insig. 89 93
o Enterobacter asburiae PDN3 EX28DRAFT_4151 type IV pilus secretin (or competence protein) PilQ insig. 78 95
o Enterobacter sp. TBS_079 MPMX20_04280 Type IV pilus biogenesis and competence protein PilQ sig. 78 98
o Klebsiella michiganensis M5al BWI76_RS26100 DNA transporter HofQ insig. 70 100
o Klebsiella pneumoniae MKP103 KDGMDA_06920 DNA uptake porin HofQ insig. 70 96
o Pectobacterium carotovorum WPP14 HER17_RS01770 DNA uptake porin HofQ insig. 52 100
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_12025 hofQ DNA uptake porin HofQ cofit 51 98
o Erwinia tracheiphila SCR3 LU632_RS22875 hofQ DNA uptake porin HofQ insig. 51 98
o Dickeya dianthicola 67-19 HGI48_RS19685 DNA uptake porin HofQ insig. 51 97
o Dickeya dianthicola ME23 DZA65_RS20770 DNA uptake porin HofQ insig. 51 97
o Erwinia amylovora T8 OLJFJH_04100 DNA uptake porin HofQ insig. 53 100
o Pantoea sp. MT58 IAI47_01885 DNA uptake porin HofQ insig. 51 99
o Dickeya dadantii 3937 DDA3937_RS19555 DNA uptake porin HofQ insig. 50 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS21715 DNA uptake porin HofQ cofit 52 98
o Rahnella sp. WP5 EX31_RS04730 DNA uptake porin HofQ insig. 50 99
o Serratia liquefaciens MT49 IAI46_23715 DNA uptake porin HofQ insig. 50 98
  Alteromonas macleodii MIT1002 MIT1002_00449 Type IV pilus biogenesis and competence protein PilQ precursor insig. 41 96
  Shewanella amazonensis SB2B Sama_3369 type IV pilus biogenesis protein PilQ (RefSeq) insig. 38 97
  Shewanella loihica PV-4 Shew_0212 type IV pilus secretin PilQ (RefSeq) sig. 39 97
  Shewanella oneidensis MR-1 SO0285 type IV pilus biogenesis protein PilQ (NCBI ptt file) insig. 38 97
  Shewanella sp. ANA-3 Shewana3_3895 type IV pilus secretin PilQ (RefSeq) insig. 38 98
  Kangiella aquimarina DSM 16071 B158DRAFT_0762 type IV pilus secretin (or competence protein) PilQ cofit 39 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_13310 type IV pilus secretin PilQ insig. 38 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1539 Type IV pilus biogenesis protein PilQ insig. 37 97
  Pseudomonas segetis P6 MPMX49_04235 Type IV pilus biogenesis and competence protein PilQ cofit 38 97
  Pseudomonas syringae pv. syringae B728a Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 37 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0407 type II and III secretion system protein:NolW-like protein:NolW-like protein insig. 37 97
  Pseudomonas fluorescens GW456-L13 PfGW456L13_277 Type IV pilus biogenesis protein PilQ insig. 37 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3756 Type IV pilus biogenesis protein PilQ insig. 38 97
  Pseudomonas sp. DMC3 GFF3098 Type IV pilus biogenesis and competence protein PilQ cofit 37 99
  Pseudomonas sp. RS175 PFR28_05011 Type 3 secretion system secretin insig. 38 97
  Pseudomonas fluorescens FW300-N2E3 AO353_12495 fimbrial protein insig. 37 97
o Pseudomonas sp. BP01 JOY50_RS09295 type IV pilus secretin PilQ insig. 38 100
  Pseudomonas sp. S08-1 OH686_10025 Type IV pilus biogenesis protein PilQ cofit 35 97
  Pseudomonas stutzeri RCH2 Psest_3715 type IV pilus secretin (or competence protein) PilQ strong 37 97
  Pseudomonas fluorescens FW300-N2C3 AO356_09395 fimbrial protein insig. 37 97
o Pseudomonas sp. SVBP6 COO64_RS13065 type IV pilus secretin PilQ insig. 36 100
  Ralstonia sp. UNC404CL21Col ABZR87_RS02600 temperature dependent type IV pilus secretin PilQ strong 35 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS06945 type IV pilus secretin PilQ cofit 34 99
  Ralstonia solanacearum UW163 UW163_RS06670 type IV pilus secretin PilQ insig. 34 99
  Ralstonia solanacearum PSI07 RPSI07_RS10290 type IV pilus secretin PilQ cofit 35 99
  Acinetobacter radioresistens SK82 MPMX26_02812 Type 3 secretion system secretin cofit 33 97
  Ralstonia solanacearum GMI1000 RS_RS14890 type IV pilus secretin PilQ insig. 35 99
  Pseudomonas aeruginosa PA14 IKLFDK_28330 type 4a pilus secretin PilQ strong 35 97
o Pseudomonas putida KT2440 PP_5080 type 4 pili biogenesis protein insig. 38 97
  Marinobacter adhaerens HP15 HP15_478 type 4 fimbrial biogenesis protein PilQ sig. 36 97
  Cupriavidus basilensis FW507-4G11 RR42_RS19015 secretin insig. 32 97
  Burkholderia phytofirmans PsJN BPHYT_RS17895 secretin insig. 35 96
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11790 type IV pilus secretin PilQ cofit 34 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS28045 type IV pilus secretin PilQ insig. 36 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_00628 Type IV pilus biogenesis and competence protein PilQ cofit 36 97
  Lysobacter sp. OAE881 ABIE51_RS17165 type IV pilus secretin PilQ family protein insig. 30 99
  Rhodanobacter sp. FW510-T8 OKGIIK_12040 pilQ type IV pilus secretin PilQ insig. 33 97
  Paraburkholderia graminis OAS925 ABIE53_003742 type IV pilus assembly protein PilQ insig. 34 97
  Rhodanobacter denitrificans MT42 LRK55_RS11580 type IV pilus secretin PilQ cofit 34 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS11855 type IV pilus secretin PilQ strong 34 97
  Herbaspirillum seropedicae SmR1 HSERO_RS20915 secretin insig. 35 97
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16685 type IV pilus secretin PilQ cofit 33 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05613 type IV pilus assembly protein PilQ insig. 34 97
  Acinetobacter baumannii LAC-4 RR41_RS01575 type IV pilus secretin PilQ insig. 31 97
  Acidovorax sp. GW101-3H11 Ac3H11_4703 Type IV pilus biogenesis protein PilQ insig. 31 97
  Dechlorosoma suillum PS Dsui_1191 type IV pilus secretin PilQ/competence protein cofit 30 97
o Pseudomonas fluorescens SBW25 PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 35 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS02020 type IV pilus secretin PilQ family protein insig. 35 99
o Pseudomonas simiae WCS417 PS417_01975 pilus assembly protein PilQ insig. 35 99
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1333 Type IV pilus biogenesis protein PilQ cofit 31 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1189.1 Type IV pilus biogenesis protein PilQ insig. 29 97
  Variovorax sp. OAS795 ABID97_RS23265 type IV pilus secretin PilQ strong 29 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU1273 bacterial type II/III secretion system protein (TIGR) strong 29 96
  Desulfovibrio vulgaris Miyazaki F DvMF_1027 type II and III secretion system protein (RefSeq) cofit 28 97
  Variovorax sp. SCN45 GFF5323 Type IV pilus biogenesis protein PilQ strong 39 42
  Methylophilus sp. DMC18 GFF2234 Type 3 secretion system secretin insig. 40 38
  Rahnella sp. WP5 EX31_RS16165 type II secretion system secretin GspD insig. 29 66
  Methylophilus sp. DMC18 GFF1858 Type 3 secretion system secretin insig. 24 99
  Ralstonia solanacearum GMI1000 RS_RS17835 tetratricopeptide repeat protein no data 27 98
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22695 general secretion pathway protein GspD insig. 26 98
  Ralstonia solanacearum UW163 UW163_RS23290 general secretion pathway protein GspD insig. 26 98
  Cupriavidus basilensis FW507-4G11 RR42_RS35995 membrane protein insig. 39 41
  Enterobacter asburiae PDN3 EX28DRAFT_2079 type II secretion system protein D insig. 29 71
  Escherichia coli Nissle 1917 ECOLIN_RS19060 type II secretion system secretin GspD insig. 29 73
  Pseudomonas fluorescens FW300-N2E3 AO353_01545 secretin insig. 32 49
  Acidovorax sp. GW101-3H11 Ac3H11_1893 General secretion pathway protein D no data 30 64
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00378 Putative type II secretion system protein D insig. 29 73
  Escherichia coli BW25113 b3325 yheF putative general protein secretion protein (VIMSS) insig. 29 73
  Ralstonia solanacearum GMI1000 RS_RS22365 membrane protein insig. 33 59
  Dickeya dadantii 3937 DDA3937_RS11585 type III secretion system outer membrane ring subunit SctC insig. 28 71
  Variovorax sp. OAS795 ABID97_RS24280 type II and III secretion system protein family protein insig. 37 44