Homologs of H281DRAFT_02033 from Paraburkholderia bryophila 376MFSha3.1

Site-specific recombinase XerD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02033 Site-specific recombinase XerD insig. 100 100
o Dechlorosoma suillum PS Dsui_1145 site-specific recombinase XerD cofit 26 87
o Paraburkholderia sabiae LMG 24235 QEN71_RS43845 site-specific integrase insig. 27 85
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_09695 integrase strong 26 90
  Bacteroides stercoris CC31F HMPREF1181_RS01250 site-specific tyrosine recombinase XerD insig. 29 47
  Vibrio cholerae E7946 ATCC 55056 CSW01_00650 tyrosine recombinase XerC strong 28 58
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS09520 site-specific tyrosine recombinase XerD sig. 27 51
  Bacteroides ovatus ATCC 8483 BACOVA_02123 tyrosine recombinase XerD insig. 31 47
  Rahnella sp. WP5 EX31_RS15165 tyrosine recombinase XerC strong 31 58
  Ralstonia sp. UNC404CL21Col ABZR87_RS05065 tyrosine recombinase XerC strong 31 49
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1809 tyrosine recombinase XerD insig. 31 47
  Ralstonia solanacearum GMI1000 RS_RS00260 Tyrosine recombinase XerC 1 insig. 31 49
  Phocaeicola dorei CL03T12C01 ABI39_RS07000 site-specific tyrosine recombinase XerD sig. 30 47
  Alteromonas macleodii MIT1002 MIT1002_00157 Tyrosine recombinase XerC insig. 30 51
  Bacteroides thetaiotaomicron VPI-5482 BT2843 integrase (NCBI ptt file) strong 30 47
  Lysobacter sp. OAE881 ABIE51_RS03035 tyrosine recombinase XerC strong 33 59
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS09680 site-specific tyrosine recombinase XerD strong 30 47
  Serratia liquefaciens MT49 IAI46_00725 tyrosine recombinase XerC insig. 29 57
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS10220 site-specific tyrosine recombinase XerD insig. 28 47
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09675 tyrosine recombinase XerC sig. 30 49
  Ralstonia solanacearum UW163 UW163_RS03905 tyrosine recombinase XerC insig. 30 49
  Erwinia tracheiphila SCR3 LU632_RS24135 xerC tyrosine recombinase XerC no data 28 57
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_00850 site-specific tyrosine recombinase XerD no data 31 47
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS04705 site-specific tyrosine recombinase XerD sig. 30 47
  Ralstonia solanacearum PSI07 RPSI07_RS23690 tyrosine recombinase XerC insig. 33 38
  Acinetobacter radioresistens SK82 MPMX26_00169 Tyrosine recombinase XerD no data 32 41
o Pseudomonas stutzeri RCH2 Psest_0422 Site-specific recombinase XerD sig. 25 80
  Dickeya dianthicola 67-19 HGI48_RS20045 tyrosine recombinase XerC strong 28 57
  Variovorax sp. SCN45 GFF4490 Site-specific tyrosine recombinase XerC strong 28 49
  Dickeya dianthicola ME23 DZA65_RS21090 tyrosine recombinase XerC insig. 28 57
  Burkholderia phytofirmans PsJN BPHYT_RS01655 tyrosine recombinase XerC no data 31 47
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3270 Site-specific recombinase XerD insig. 28 52
  Pantoea sp. MT58 IAI47_18400 tyrosine recombinase XerC sig. 29 57
  Pectobacterium carotovorum WPP14 HER17_RS01350 tyrosine recombinase XerC strong 29 57
  Ralstonia solanacearum GMI1000 RS_RS17610 recombinase XerC insig. 29 53
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.847.1 Site-specific tyrosine recombinase no data 32 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02202 integrase/recombinase XerC no data 30 47
  Mycobacterium tuberculosis H37Rv Rv1701 Probable integrase/recombinase sig. 32 45
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF547 Tyrosine recombinase XerC sig. 30 49
  Dickeya dadantii 3937 DDA3937_RS19890 tyrosine recombinase XerC no data 27 58
  Kangiella aquimarina DSM 16071 B158DRAFT_0342 integron integrase insig. 25 50
  Paraburkholderia sabiae LMG 24235 QEN71_RS00355 tyrosine recombinase XerC no data 30 47
  Cupriavidus basilensis FW507-4G11 RR42_RS00615 recombinase XerC sig. 28 49
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF239 Tyrosine recombinase XerC no data 27 59
  Escherichia coli ECRC62 BNILDI_04985 xerC tyrosine recombinase XerC no data 26 60
  Ralstonia solanacearum UW163 UW163_RS23220 recombinase XerC insig. 28 53
  Paraburkholderia graminis OAS925 ABIE53_000426 integrase/recombinase XerC no data 31 47
  Kangiella aquimarina DSM 16071 B158DRAFT_2265 tyrosine recombinase XerD strong 27 49
  Escherichia coli ECOR27 NOLOHH_06550 xerC tyrosine recombinase XerC no data 26 60
  Escherichia coli ECOR38 HEPCGN_13125 xerC tyrosine recombinase XerC insig. 26 60
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04239 Tyrosine recombinase XerC insig. 26 60
  Escherichia coli Nissle 1917 ECOLIN_RS21875 tyrosine recombinase XerC cofit 26 60
  Escherichia coli BW25113 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) strong 26 60
  Klebsiella michiganensis M5al BWI76_RS01210 tyrosine recombinase XerC strong 27 73
  Enterobacter asburiae PDN3 EX28DRAFT_4480 tyrosine recombinase XerC no data 26 57
  Escherichia coli BL21 ECD_03687 site-specific tyrosine recombinase sig. 26 59
  Escherichia fergusonii Becca EFB2_04826 Tyrosine recombinase XerC strong 26 60
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS08535 tyrosine recombinase XerC insig. 32 59
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS19225 site-specific tyrosine recombinase XerD strong 30 47
  Dinoroseobacter shibae DFL-12 Dshi_3700 integrase family protein (RefSeq) insig. 28 49
  Magnetospirillum magneticum AMB-1 AMB_RS04775 integrase insig. 28 49
  Desulfovibrio vulgaris Miyazaki F DvMF_0359 tyrosine recombinase XerD (RefSeq) strong 27 71
  Alteromonas macleodii MIT1002 MIT1002_00786 Tyrosine recombinase XerD insig. 27 48
  Shewanella amazonensis SB2B Sama_3247 integrase/recombinase XerC (RefSeq) strong 27 47
  Escherichia coli ECRC101 OKFHMN_14420 xerC tyrosine recombinase XerC no data 26 59
  Escherichia coli ECRC101 MCAODC_04925 xerC tyrosine recombinase XerC no data 26 59
  Escherichia coli ECRC102 NIAGMN_12175 xerC tyrosine recombinase XerC no data 26 59
  Escherichia coli ECRC98 JDDGAC_18045 xerC tyrosine recombinase XerC no data 26 59
  Escherichia coli ECRC99 KEDOAH_13730 xerC tyrosine recombinase XerC no data 26 59
  Enterobacter sp. TBS_079 MPMX20_04465 Tyrosine recombinase XerC strong 27 56
  Pseudomonas fluorescens SBW25 PFLU_RS12315 site-specific integrase insig. 34 33
  Pseudomonas fluorescens SBW25-INTG PFLU_RS12315 site-specific integrase sig. 34 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU1654 xerD site-specific recombinase, phage integrase family (TIGR) sig. 31 47
  Herbaspirillum seropedicae SmR1 HSERO_RS21475 recombinase XerC insig. 28 49
  Agrobacterium fabrum C58 Atu2628 site-specific recombinase no data 32 39
  Pseudomonas fluorescens FW300-N2E3 AO353_09050 recombinase XerC sig. 31 47
  Rhodanobacter denitrificans MT42 LRK55_RS08300 tyrosine recombinase XerC strong 31 59
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15025 tyrosine recombinase XerC strong 30 59
  Dinoroseobacter shibae DFL-12 Dshi_3629 integrase family protein (RefSeq) no data 28 51
  Dinoroseobacter shibae DFL-12 Dshi_3661 integrase family protein (RefSeq) no data 28 51
  Dechlorosoma suillum PS Dsui_1217 tyrosine recombinase XerD cofit 28 52
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4416 Tyrosine recombinase XerC strong 29 47
  Variovorax sp. OAS795 ABID97_RS06150 tyrosine recombinase XerC sig. 27 49
  Mycobacterium tuberculosis H37Rv Rv2894c Probable integrase/recombinase XerC no data 28 40
  Pseudomonas fluorescens FW300-N2C3 AO356_12725 recombinase XerC strong 29 47
  Paraburkholderia sabiae LMG 24235 QEN71_RS39850 site-specific integrase no data 29 51
  Paraburkholderia sabiae LMG 24235 QEN71_RS42300 site-specific integrase no data 29 51
  Mycobacterium tuberculosis H37Rv Rv2646 Probable integrase insig. 28 53
  Bacteroides stercoris CC31F HMPREF1181_RS09900 site-specific integrase insig. 27 49
  Rhodospirillum rubrum S1H Rru_A1220 Phage integrase (NCBI) no data 32 38
  Paraburkholderia sabiae LMG 24235 QEN71_RS44560 site-specific integrase no data 29 51
  Acidovorax sp. GW101-3H11 Ac3H11_1995 Tyrosine recombinase XerC sig. 28 49
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2171 Tyrosine recombinase XerC insig. 29 47
  Bosea sp. OAE506 ABIE41_RS07870 tyrosine recombinase XerC strong 33 40
  Castellaniella sp019104865 MT123 ABCV34_RS00515 site-specific tyrosine recombinase XerD insig. 31 48
  Pseudomonas sp. S08-1 OH686_13785 tyrosine recombinase XerC insig. 30 47
  Pseudomonas sp. RS175 PFR28_04378 Tyrosine recombinase XerC strong 29 47
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS08890 site-specific integrase insig. 28 49
  Dinoroseobacter shibae DFL-12 Dshi_3696 integrase family protein (RefSeq) no data 31 41
  Dinoroseobacter shibae DFL-12 Dshi_4006 integrase family protein (RefSeq) no data 31 41