Homologs of GFF3508 from Variovorax sp. SCN45

Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system
SEED: RND efflux system, outer membrane lipoprotein CmeC

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Variovorax sp. SCN45 GFF3508 Multidrug efflux system, outer membrane factor lipoprotein => OpmD of MexHI-OpmD system sig. 100 100
o Rhodanobacter sp. FW510-T8 OKGIIK_14960 tolC RND transporter insig. 45 94
o Pseudomonas aeruginosa PA14 IKLFDK_21665 multidrug efflux transporter outer membrane subunit OpmD insig. 47 97
o Pseudomonas aeruginosa PUPa3 DQ20_RS49370 opmD;inference=COORDINATES multidrug efflux transporter outer membrane subunit OpmD no data 47 97
o Pseudomonas aeruginosa MRSN321 DY961_RS28530 opmD;inference=COORDINATES multidrug efflux transporter outer membrane subunit OpmD insig. 47 97
o Rhodanobacter denitrificans MT42 LRK55_RS07895 TolC family protein insig. 46 94
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS08145 TolC family protein insig. 46 94
o Pseudomonas sp. SVBP6 COO64_RS10730 efflux transporter outer membrane subunit insig. 48 95
o Pseudomonas sp. BP01 JOY50_RS24355 efflux transporter outer membrane subunit insig. 44 94
o Pseudomonas putida KT2440 PP_3427 Multidrug efflux RND outer membrane protein OprN sig. 44 94
o Pseudomonas sp. DMC3 GFF2879 Outer membrane protein OprM cofit 43 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4863 Outer membrane protein OprN sig. 43 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3059 Outer membrane protein OprN sig. 43 96
o Pseudomonas segetis P6 ACVTMO_RS11945 efflux transporter outer membrane subunit insig. 43 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_949 Outer membrane protein OprN insig. 44 95
  Pseudomonas sp. SVBP6 COO64_RS25175 efflux transporter outer membrane subunit insig. 44 94
o Pseudomonas sp. S08-1 OH686_01000 Multidrug efflux system, outer membrane factor lipoprotein cofit 47 96
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3475.1 RND efflux system, outer membrane lipoprotein CmeC insig. 44 94
o Pseudomonas syringae pv. syringae B728a Psyr_2969 RND efflux system, outer membrane lipoprotein, NodT sig. 45 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2969 RND efflux system, outer membrane lipoprotein, NodT strong 45 96
o Pseudomonas stutzeri RCH2 Psest_2143 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 48 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_823 Outer membrane protein OprN strong 44 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS15395 efflux transporter outer membrane subunit cofit 44 95
  Pseudomonas aeruginosa MRSN321 DY961_RS05180 oprN;inference=COORDINATES multidrug efflux RND transporter outer membrane subunit OprN insig. 45 96
  Pseudomonas aeruginosa PUPa3 DQ20_RS36055 oprN;inference=COORDINATES multidrug efflux RND transporter outer membrane subunit OprN sig. 45 96
o Pseudomonas sp. RS175 PFR28_01727 Outer membrane protein OprM insig. 44 93
  Pseudomonas aeruginosa PA14 IKLFDK_12255 multidrug efflux RND transporter outer membrane subunit OprN insig. 45 96
o Pseudomonas fluorescens FW300-N2C3 AO356_27610 RND transporter insig. 43 93
o Pseudomonas simiae WCS417 PS417_13185 RND transporter insig. 43 96
o Pseudomonas lactucae CFBP13502 GEMAOFIL_03224 Outer membrane protein OprM cofit 43 96
o Pseudomonas fluorescens SBW25 PFLU_RS14255 TolC family protein insig. 43 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14255 TolC family protein sig. 43 96
o Pseudomonas orientalis W4I3 QF045_RS16765 TolC family protein cofit 42 96
o Pseudomonas fluorescens FW300-N2E3 AO353_23955 RND transporter sig. 43 96
o Lysobacter sp. OAE881 ABIE51_RS01070 efflux transporter outer membrane subunit cofit 44 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS32785 efflux transporter outer membrane subunit insig. 37 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_2553 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 41 98
  Pseudomonas aeruginosa MRSN321 DY961_RS02810 efflux transporter outer membrane subunit insig. 37 94
  Pseudomonas aeruginosa PA14 IKLFDK_14410 RND transporter insig. 37 94
  Pseudomonas sp. SVBP6 COO64_RS11485 efflux transporter outer membrane subunit strong 36 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4169 Outer membrane component of tripartite multidrug resistance system insig. 37 98
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3520 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family strong 39 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00347 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 34 98
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS04165 efflux transporter outer membrane subunit cofit 37 94
  Pseudomonas fluorescens FW300-N2E3 AO353_11235 RND transporter insig. 34 95
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1678 Outer membrane component of tripartite multidrug resistance system insig. 36 96
  Pseudomonas fluorescens SBW25 PFLU_RS00675 efflux transporter outer membrane subunit insig. 35 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00675 efflux transporter outer membrane subunit insig. 35 96
  Pseudomonas sp. DMC3 GFF4274 putative efflux pump outer membrane protein TtgC cofit 36 96
o Rahnella sp. WP5 EX31_RS10805 efflux transporter outer membrane subunit insig. 35 94
o Paraburkholderia graminis OAS925 ABIE53_002589 NodT family efflux transporter outer membrane factor (OMF) lipoprotein insig. 34 98
o Castellaniella sp019104865 MT123 ABCV34_RS01305 efflux transporter outer membrane subunit insig. 39 95
o Burkholderia phytofirmans PsJN BPHYT_RS10540 secretion protein insig. 33 98
  Cupriavidus basilensis FW507-4G11 RR42_RS03040 Outer membrane protein (NodT-like) required for 4-hydroxybenzoate transport, together with FUSC, MFP, and DUF1656 proteins (RR42_RS03025, RR42_RS03035, and RR42_RS03030) (from data) strong 36 94
  Pseudomonas sp. RS175 PFR28_04798 putative efflux pump outer membrane protein TtgC insig. 35 96
  Pseudomonas simiae WCS417 PS417_00665 RND transporter strong 35 96
o Xanthobacter sp. DMC5 GFF2163 Toluene efflux pump outer membrane protein TtgI insig. 36 95
  Burkholderia phytofirmans PsJN BPHYT_RS08385 secretion protein insig. 33 97
o Paraburkholderia sabiae LMG 24235 QEN71_RS38300 efflux transporter outer membrane subunit insig. 33 95
  Pseudomonas fluorescens GW456-L13 PfGW456L13_524 Outer membrane component of tripartite multidrug resistance system insig. 35 96
o Desulfovibrio vulgaris Miyazaki F DvMF_2159 RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) insig. 37 95
  Pseudomonas orientalis W4I3 QF045_RS03645 efflux transporter outer membrane subunit insig. 35 97
  Pseudomonas aeruginosa PUPa3 DQ20_RS41740 opmE;inference=COORDINATES multidrug efflux transporter outer membrane subunit OpmE insig. 38 96
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00339 putative efflux pump outer membrane protein TtgC cofit 35 96
  Pseudomonas aeruginosa MRSN321 DY961_RS15410 opmE;inference=COORDINATES multidrug efflux transporter outer membrane subunit OpmE insig. 38 96
  Pseudomonas aeruginosa PA14 IKLFDK_17975 multidrug efflux transporter outer membrane subunit OpmE insig. 38 96
o Pantoea sp. MT58 IAI47_13160 efflux transporter outer membrane subunit insig. 37 94
  Rhodanobacter denitrificans MT42 LRK55_RS13900 efflux transporter outer membrane subunit insig. 39 97
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS14180 efflux transporter outer membrane subunit insig. 39 97
o Desulfovibrio vulgaris Hildenborough JW710 DVU3246 RND efflux system, outer membrane protein, NodT family (TIGR) insig. 34 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04936 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 34 94
o Bosea sp. OAE506 ABIE41_RS01590 efflux transporter outer membrane subunit insig. 36 96
o Dechlorosoma suillum PS Dsui_3175 efflux transporter, outer membrane factor lipoprotein, NodT family no data 37 87
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS14430 efflux transporter outer membrane subunit insig. 37 97
  Pseudomonas sp. BP01 JOY50_RS15420 efflux transporter outer membrane subunit insig. 34 94
  Cupriavidus basilensis FW507-4G11 RR42_RS33890 RND transporter insig. 35 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS07915 TolC family protein insig. 37 99
o Erwinia tracheiphila SCR3 LU632_RS09495 efflux transporter outer membrane subunit insig. 35 97
o Enterobacter sp. TBS_079 MPMX20_01451 Toluene efflux pump outer membrane protein TtgI insig. 36 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS09280 efflux transporter outer membrane subunit insig. 33 94
  Pseudomonas putida KT2440 PP_1273 putative Multidrug efflux MFS outer membrane protein sig. 33 94
o Enterobacter asburiae PDN3 EX28DRAFT_2165 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family cofit 36 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01876 outer membrane protein, multidrug efflux system insig. 32 97
o Agrobacterium fabrum C58 Atu2552 nodulation protein T precursor no data 31 99
o Shewanella sp. ANA-3 Shewana3_1918 outer membrane efflux protein (RefSeq) insig. 33 94
  Paraburkholderia sabiae LMG 24235 QEN71_RS35030 efflux transporter outer membrane subunit strong 35 95
  Desulfovibrio vulgaris Miyazaki F DvMF_0034 RND efflux system, outer membrane lipoprotein, NodT family (RefSeq) insig. 34 95
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1849 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family insig. 37 96
  Sphingobium sp. HT1-2 GFF2978 Efflux transport system, outer membrane factor (OMF) lipoprotein cofit 36 94
o Serratia liquefaciens MT49 IAI46_13390 TolC family protein insig. 37 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS03460 efflux transporter outer membrane subunit insig. 32 95
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS10435 TolC family protein insig. 37 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS09640 efflux transporter outer membrane subunit insig. 33 95
  Paraburkholderia sabiae LMG 24235 QEN71_RS09200 efflux transporter outer membrane subunit insig. 31 97
o Erwinia amylovora T8 OLJFJH_16410 RND transporter insig. 33 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_19970 RND transporter cofit 33 97
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2209.1 Outer membrane component of tripartite multidrug resistance system insig. 36 95
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5308.1 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA insig. 35 94
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09920 TolC family protein strong 38 93
  Desulfovibrio vulgaris Hildenborough JW710 DVU0062 RND efflux system, outer membrane protein, NodT family (TIGR) strong 34 96