| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Variovorax sp. SCN45 | GFF3429 | | Transcriptional regulator, AraC family | insig. | 100 | 100 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS22525 | | AraC family transcriptional regulator | insig. | 49 | 99 |
| o | Pseudomonas sp. SVBP6 | COO64_RS14840 | | GyrI-like domain-containing protein | insig. | 48 | 96 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4190 | | transcriptional regulator, AraC family | insig. | 45 | 98 |
| o | Desulfovibrio vulgaris Hildenborough JW710 | DVU0277 | | transcriptional regulator, AraC family (TIGR) | insig. | 34 | 97 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT2372 | | transcriptional regulator (NCBI ptt file) | sig. | 30 | 98 |
| o | Methylophilus sp. DMC18 | GFF890 | | HTH-type transcriptional activator RhaR | insig. | 33 | 92 |
| o | Herbaspirillum seropedicae SmR1 | HSERO_RS19895 | | AraC family transcriptional regulator | insig. | 35 | 93 |
| o | Ralstonia solanacearum GMI1000 | RS_RS00650 | | AraC family transcriptional regulator | insig. | 37 | 86 |
| o | Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 32 | 92 |
| o | Pseudomonas simiae WCS417 | PS417_01425 | | AraC family transcriptional regulator | insig. | 35 | 90 |
| o | Pseudomonas sp. RS175 | PFR28_02003 | | HTH-type transcriptional activator RhaR | insig. | 34 | 90 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_05170 | | AraC family transcriptional regulator | insig. | 37 | 90 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1576 | | transcriptional regulator, AraC family (RefSeq) | insig. | 31 | 97 |
| o | Azospirillum sp. SherDot2 | MPMX19_01363 | | HTH-type transcriptional activator RhaS | insig. | 33 | 91 |
| o | Dechlorosoma suillum PS | Dsui_2034 | | DNA gyrase inhibitor | insig. | 34 | 92 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 33 | 90 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS23330 | | AraC family transcriptional regulator | insig. | 37 | 86 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS05545 | | AraC family transcriptional regulator | insig. | 35 | 86 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3136 | | Uncharacterized protein ygiV | insig. | 34 | 90 |
| | Pseudomonas sp. SVBP6 | COO64_RS23290 | | GyrI-like domain-containing protein | insig. | 35 | 90 |
| o | Rahnella sp. WP5 | EX31_RS13520 | | AraC family transcriptional regulator | insig. | 31 | 92 |
| o | Shewanella amazonensis SB2B | Sama_0076 | | transcription activator, effector binding (RefSeq) | insig. | 33 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_02438 | | DNA gyrase inhibitor | insig. | 32 | 98 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10040 | | AraC family transcriptional regulator | insig. | 36 | 86 |
| o | Ralstonia solanacearum UW163 | UW163_RS03540 | | AraC family transcriptional regulator | insig. | 36 | 86 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_28535 | | AraC family transcriptional regulator | insig. | 34 | 90 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 90 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS18330 | | AraC family transcriptional regulator | insig. | 34 | 90 |
| o | Pseudomonas putida KT2440 | PP_2173 | | Transcriptional regulator, AraC family | sig. | 31 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS00835 | | transcriptional regulator | insig. | 33 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS00095 | | AraC family transcriptional regulator | insig. | 32 | 98 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS19395 | | AraC family transcriptional regulator | cofit | 32 | 90 |
| o | Caulobacter crescentus NA1000 | CCNA_02611 | | AraC-family transcriptional regulator | insig. | 34 | 91 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_02611 | | AraC-family transcriptional regulator | cofit | 34 | 91 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02865 | | HTH-type transcriptional activator RhaR | insig. | 33 | 90 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS00025 | | AraC family transcriptional regulator | insig. | 31 | 98 |
| o | Xanthobacter sp. DMC5 | GFF3513 | | HTH-type transcriptional activator RhaS | insig. | 32 | 91 |
| | Phaeobacter inhibens DSM 17395 | PGA1_c30530 | | HTH-type transcriptional regulator, AraC family | insig. | 32 | 90 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS17815 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 33 | 90 |
| | Ralstonia solanacearum UW163 | UW163_RS21325 | | bifunctional DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase | insig. | 33 | 90 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4142 | | conserved hypothetical protein (NCBI ptt file) | insig. | 31 | 88 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1904 | | transcriptional regulator, AraC-type (NCBI ptt file) | insig. | 26 | 90 |
| | Ralstonia solanacearum GMI1000 | RS_RS23160 | | AraC family transcriptional regulator | insig. | 32 | 90 |
| o | Bacteroides stercoris CC31F | HMPREF1181_RS07810 | | AraC family transcriptional regulator | insig. | 25 | 91 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_23800 | | AraC family transcriptional regulator | insig. | 32 | 87 |
| o | Bacteroides ovatus ATCC 8483 | BACOVA_01480 | | transcriptional regulator, effector binding domain protein | insig. | 26 | 90 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4832 | | transcriptional regulator, AraC type; possible DNA gyrase inhibitor | insig. | 29 | 97 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26630 | | AraC family transcriptional regulator | insig. | 32 | 90 |
| | Rhizobium sp. OAE497 | ABIE40_RS10300 | | AraC family transcriptional regulator | insig. | 29 | 90 |
| | Variovorax sp. SCN45 | GFF1185 | | Transcriptional regulator, AraC family | insig. | 33 | 83 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS20800 | | AraC family transcriptional regulator | insig. | 28 | 99 |
| | Rhodopseudomonas palustris CGA009 | TX73_004525 | | AraC family transcriptional regulator | insig. | 28 | 97 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05745 | | transcription regulator protein | insig. | 32 | 90 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02195 | | transcriptional regulator, AraC family | insig. | 42 | 34 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1401.1 | | hypothetical protein | sig. | 30 | 87 |
| o | Dickeya dadantii 3937 | DDA3937_RS18435 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 28 | 95 |
| o | Dickeya dianthicola 67-19 | HGI48_RS18365 | | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 28 | 95 |
| o | Dickeya dianthicola ME23 | DZA65_RS19505 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 28 | 95 |
| | Pectobacterium carotovorum WPP14 | HER17_RS02770 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 28 | 95 |
| o | Bifidobacterium breve UCC2003 | BBR_RS14655 | | AraC family transcriptional regulator | strong | 27 | 95 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2973 | | transcriptional regulator (NCBI ptt file) | strong | 40 | 35 |
| | Serratia liquefaciens MT49 | IAI46_07760 | | helix-turn-helix domain-containing protein | insig. | 40 | 37 |
| | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_06315 | robA | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 29 | 77 |
| | Erwinia tracheiphila SCR3 | LU632_RS02595 | robA | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 29 | 77 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03043 | | transcriptional regulator, effector binding domain protein | insig. | 24 | 89 |
| | Erwinia amylovora T8 | OLJFJH_14040 | | AraC family transcriptional regulator | insig. | 43 | 32 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03691 | | transcriptional regulator, AraC family | insig. | 28 | 94 |
| | Rahnella sp. WP5 | EX31_RS03965 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS01995 | | AraC family transcriptional regulator | insig. | 42 | 30 |
| | Serratia liquefaciens MT49 | IAI46_03005 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 95 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1014 | | Transcriptional regulator, AraC family | insig. | 36 | 48 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1064 | | Right origin-binding protein | insig. | 27 | 95 |
| | Escherichia coli BL21 | ECD_03934 | | superoxide response regulon transcriptional activator; autoregulator | insig. | 39 | 30 |
| | Escherichia fergusonii Becca | EFB2_04529 | | Regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECOR27 | NOLOHH_05125 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECOR38 | HEPCGN_11490 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECRC100 | OKFHMN_12875 | soxS_A12S | regulatory protein SoxS | cofit | 39 | 30 |
| | Escherichia coli ECRC101 | MCAODC_03385 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECRC102 | NIAGMN_10720 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECRC62 | BNILDI_06400 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECRC98 | JDDGAC_16510 | soxS_A12S | regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli ECRC99 | KEDOAH_15275 | soxS_A12S | regulatory protein SoxS | no data | 39 | 30 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03979 | | Regulatory protein SoxS | insig. | 39 | 30 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23505 | | superoxide response transcriptional regulator SoxS | no data | 39 | 30 |
| | Escherichia coli BW25113 | b4062 | soxS | DNA-binding transcriptional dual regulator (NCBI) | strong | 39 | 30 |
| o | Pantoea sp. MT58 | IAI47_16240 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 25 | 95 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004566 | | AraC family transcriptional regulator | insig. | 28 | 94 |
| | Serratia liquefaciens MT49 | IAI46_09935 | | helix-turn-helix domain-containing protein | insig. | 40 | 30 |
| | Pantoea sp. MT58 | IAI47_17770 | | superoxide response transcriptional regulator SoxS | insig. | 41 | 32 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1441 | | Regulatory protein SoxS | insig. | 38 | 30 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21865 | | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 38 | 34 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21095 | | superoxide response transcriptional regulator SoxS | cofit | 41 | 32 |
| | Dickeya dianthicola ME23 | DZA65_RS08735 | | helix-turn-helix domain-containing protein | insig. | 38 | 32 |
| | Dickeya dianthicola 67-19 | HGI48_RS08140 | | helix-turn-helix domain-containing protein | cofit | 34 | 47 |
| o | Sinorhizobium meliloti 1021 | SMc03170 | | transcriptional regulator | insig. | 27 | 93 |
| | Erwinia amylovora T8 | OLJFJH_03390 | | superoxide response transcriptional regulator SoxS | insig. | 40 | 31 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10485 | | superoxide response transcriptional regulator SoxS | insig. | 39 | 30 |
| | Erwinia amylovora T8 | OLJFJH_01510 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 38 | 34 |
| | Escherichia coli BL21 | ECD_04272 | | right oriC-binding transcriptional activator, AraC family | insig. | 26 | 95 |