Homologs of GFF2829 from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Rtn protein
SEED: Rtn protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2829 Rtn protein insig. 100 100
o Escherichia coli BL21 ECD_01785 putative membrane-anchored cyclic-di-GMP phosphodiesterase, regulator of cellulose production insig. 76 100
o Escherichia coli ECOR27 NOLOHH_17065 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01916 putative cyclic di-GMP phosphodiesterase PdeD cofit 76 100
o Escherichia coli BW25113 b1815 b1815 orf, hypothetical protein (VIMSS) sig. 76 100
o Escherichia coli ECRC100 OKFHMN_26545 pdeD putative cyclic di-GMP phosphodiesterase PdeD cofit 76 100
o Escherichia coli ECRC101 MCAODC_18865 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli ECRC102 NIAGMN_01520 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli ECRC98 JDDGAC_01120 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli ECRC99 KEDOAH_01565 pdeD putative cyclic di-GMP phosphodiesterase PdeD no data 76 100
o Escherichia fergusonii Becca EFB2_02185 putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli ECRC62 BNILDI_15850 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 76 100
o Escherichia coli ECOR38 HEPCGN_04935 pdeD putative cyclic di-GMP phosphodiesterase PdeD insig. 75 100
o Escherichia coli Nissle 1917 ECOLIN_RS10095 cyclic diguanylate phosphodiesterase insig. 75 100
o Enterobacter sp. TBS_079 MPMX20_02720 putative cyclic di-GMP phosphodiesterase PdeD insig. 71 100
o Enterobacter asburiae PDN3 EX28DRAFT_0744 FOG: EAL domain insig. 69 100
o Klebsiella pneumoniae MKP103 KDGMDA_25165 cyclic diguanylate phosphodiesterase insig. 58 96
o Klebsiella michiganensis M5al BWI76_RS17880 c-di-GMP phosphodiesterase sig. 60 96
o Pantoea sp. MT58 IAI47_08780 EAL domain-containing protein insig. 51 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02610 cyclic diguanylate phosphodiesterase cofit 52 96
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_22395 cyclic diguanylate phosphodiesterase insig. 50 96
o Erwinia tracheiphila SCR3 LU632_RS13190 cyclic diguanylate phosphodiesterase insig. 50 96
o Serratia liquefaciens MT49 IAI46_14800 EAL domain-containing protein insig. 47 96
o Rahnella sp. WP5 EX31_RS24710 EAL domain-containing protein insig. 40 96
  Cupriavidus basilensis FW507-4G11 RR42_RS34735 diguanylate phosphodiesterase insig. 34 94
o Pseudomonas sp. DMC3 GFF2936 putative cyclic di-GMP phosphodiesterase PdeG cofit 34 93
o Pseudomonas fluorescens FW300-N2C3 AO356_22830 diguanylate phosphodiesterase insig. 34 96
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3760 Rtn protein insig. 32 95
o Pseudomonas fluorescens GW456-L13 PfGW456L13_2932 Rtn protein insig. 33 93
o Pseudomonas sp. SVBP6 COO64_RS25125 EAL domain-containing protein insig. 35 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_452 Rtn protein insig. 34 96
o Pseudomonas fluorescens FW300-N2E3 AO353_26940 diguanylate phosphodiesterase insig. 35 86
o Pseudomonas orientalis W4I3 QF045_RS15940 EAL domain-containing protein cofit 35 93
o Pseudomonas simiae WCS417 PS417_14020 diguanylate phosphodiesterase insig. 34 94
o Pseudomonas fluorescens SBW25 PFLU_RS14595 EAL domain-containing protein insig. 35 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS14595 EAL domain-containing protein sig. 35 94
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02935 putative cyclic di-GMP phosphodiesterase PdeG cofit 34 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5006 Rtn protein insig. 32 94
  Pseudomonas aeruginosa PA14 IKLFDK_19700 cyclic diguanylate phosphodiesterase insig. 33 96
  Enterobacter sp. TBS_079 MPMX20_03142 putative cyclic di-GMP phosphodiesterase PdeN insig. 33 94
o Pseudomonas putida KT2440 PP_3435 conserved protein of unknown function insig. 36 87
o Pseudomonas sp. BP01 JOY50_RS24390 EAL domain-containing protein insig. 35 87
  Pseudomonas aeruginosa PUPa3 DQ20_RS49030 EAL domain-containing protein no data 33 94
  Pseudomonas aeruginosa MRSN321 DY961_RS13765 EAL domain-containing protein insig. 33 94
  Rahnella sp. WP5 EX31_RS11005 EAL domain-containing protein insig. 33 95
  Enterobacter asburiae PDN3 EX28DRAFT_0385 FOG: EAL domain insig. 32 95
  Klebsiella michiganensis M5al BWI76_RS19775 phage resistance protein strong 32 92
  Escherichia coli ECOR38 HEPCGN_22660 pdeN cyclic di-GMP phosphodiesterase insig. 29 95
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01533 putative cyclic di-GMP phosphodiesterase PdeN insig. 29 95
  Escherichia coli BW25113 b2176 rtn hypothetical protein (NCBI) insig. 29 95
  Escherichia coli Nissle 1917 ECOLIN_RS12725 cyclic di-GMP phosphodiesterase insig. 29 95
  Escherichia coli ECRC62 BNILDI_13890 pdeN cyclic di-GMP phosphodiesterase insig. 30 95
  Erwinia amylovora T8 OLJFJH_04460 cyclic diguanylate phosphodiesterase insig. 33 81
  Escherichia fergusonii Becca EFB2_01680 putative cyclic di-GMP phosphodiesterase PdeN insig. 29 95
  Escherichia coli ECRC100 OKFHMN_23395 pdeN cyclic di-GMP phosphodiesterase cofit 29 95
  Escherichia coli ECRC101 MCAODC_14445 pdeN cyclic di-GMP phosphodiesterase insig. 29 95
  Escherichia coli ECRC102 NIAGMN_21160 pdeN cyclic di-GMP phosphodiesterase cofit 29 95
  Escherichia coli ECRC98 JDDGAC_27355 pdeN cyclic di-GMP phosphodiesterase insig. 29 95
  Escherichia coli ECRC99 KEDOAH_04790 pdeN cyclic di-GMP phosphodiesterase no data 29 95
  Escherichia coli ECOR27 NOLOHH_14970 pdeN cyclic di-GMP phosphodiesterase sig. 29 95
  Escherichia coli BL21 ECD_02106 resistance protein for phages lambda and N4, putative membrane-anchored cyclic-di-GMP phosphodiesterase cofit 29 95
  Pectobacterium carotovorum WPP14 HER17_RS21350 EAL domain-containing protein insig. 32 82
  Serratia liquefaciens MT49 IAI46_17310 cyclic di-GMP phosphodiesterase insig. 31 94
  Escherichia coli ECRC101 MCAODC_23905 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 31 94
  Escherichia coli ECRC102 NIAGMN_23805 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 31 94
  Escherichia coli ECRC98 JDDGAC_08140 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) insig. 31 94
  Escherichia coli ECRC99 KEDOAH_23215 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) no data 31 94
  Klebsiella pneumoniae MKP103 KDGMDA_26715 cyclic di-GMP phosphodiesterase insig. 31 93
  Escherichia coli ECRC100 OKFHMN_04530 eAL EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant) no data 31 94
  Rahnella sp. WP5 EX31_RS19125 cyclic di-GMP phosphodiesterase insig. 30 93
  Erwinia amylovora T8 OLJFJH_11745 cyclic di-GMP phosphodiesterase strong 31 95
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00705 cyclic di-GMP phosphodiesterase cofit 34 81
  Dickeya dadantii 3937 DDA3937_RS13005 EAL domain-containing protein insig. 29 88
  Pantoea sp. MT58 IAI47_06620 cyclic di-GMP phosphodiesterase insig. 33 81
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17945 EAL domain-containing protein cofit 28 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4237 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 85
  Enterobacter sp. TBS_079 MPMX20_01826 putative cyclic di-GMP phosphodiesterase PdeG insig. 30 92
  Dickeya dianthicola 67-19 HGI48_RS13070 EAL domain-containing protein insig. 30 83
  Dickeya dianthicola ME23 DZA65_RS13535 EAL domain-containing protein insig. 30 83
  Shewanella sp. ANA-3 Shewana3_0777 EAL domain-containing protein (RefSeq) insig. 42 50
  Sphingobium sp. HT1-2 GFF2536 hypothetical protein insig. 41 50
  Pantoea sp. MT58 IAI47_01435 EAL domain-containing protein insig. 34 56
  Shewanella oneidensis MR-1 SO3821 rtn protein (NCBI ptt file) insig. 32 78
  Enterobacter asburiae PDN3 EX28DRAFT_1790 FOG: EAL domain insig. 32 80
  Klebsiella michiganensis M5al BWI76_RS14100 diguanylate phosphodiesterase insig. 28 86
  Herbaspirillum seropedicae SmR1 HSERO_RS18635 signal transduction protein insig. 38 49
  Enterobacter asburiae PDN3 EX28DRAFT_1011 FOG: EAL domain insig. 30 88
  Methylophilus sp. DMC18 GFF393 hypothetical protein cofit 36 53
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4919.1 FIG01210508: hypothetical protein insig. 38 49
  Acidovorax sp. GW101-3H11 Ac3H11_3798 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 83
  Synechococcus elongatus PCC 7942 Synpcc7942_0122 EAL insig. 40 48
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_467 Sensory box/GGDEF family protein insig. 38 44
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 36 47
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_06460 diguanylate phosphodiesterase insig. 29 93
  Marinobacter adhaerens HP15 HP15_1415 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 39 43
  Rhizobium sp. OAE497 ABIE40_RS05110 EAL domain-containing protein insig. 36 52
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4670 Sensory box/GGDEF family protein insig. 39 44
  Pseudomonas fluorescens FW300-N2C3 AO356_22925 histidine kinase insig. 38 45
  Ralstonia solanacearum PSI07 RPSI07_RS21500 bifunctional diguanylate cyclase/phosphodiesterase insig. 40 43
  Acidovorax sp. GW101-3H11 Ac3H11_4997 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 38 45