Homologs of PGA1_c16410 from Phaeobacter inhibens DSM 17395

ribosomal large subunit pseudouridine synthase E
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Phaeobacter inhibens DSM 17395 PGA1_c16410 ribosomal large subunit pseudouridine synthase E insig. 100 100
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 70 78
  Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 66 78
o Dechlorosoma suillum PS Dsui_3293 pseudouridine synthase family protein insig. 56 98
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 66 78
  Pseudomonas fluorescens FW300-N2C3 AO356_15455 pseudouridine synthase insig. 65 78
  Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 65 78
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 65 78
  Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 65 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 65 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 65 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 64 78
  Pseudomonas putida KT2440 PP_4778 23S rRNA pseudouridine 2457 synthase insig. 67 78
  Magnetospirillum magneticum AMB-1 AMB_RS12420 pseudouridine synthase cofit 64 80
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 63 78
  Acidovorax sp. GW101-3H11 Ac3H11_10 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 67 78
  Pseudomonas syringae pv. syringae B728a Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 63 78
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 63 78
  Pseudomonas sp. S08-1 OH686_08840 LSU rRNA pseudouridine(2457) synthase insig. 64 78
o Azospirillum brasilense Sp245 AZOBR_RS03795 Pseudouridine synthase insig. 60 85
  Alteromonas macleodii MIT1002 MIT1002_01829 Ribosomal large subunit pseudouridine synthase E insig. 61 76
o Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 61 85
  Variovorax sp. SCN45 GFF6670 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) insig. 66 77
  Dinoroseobacter shibae DFL-12 Dshi_2908 pseudouridine synthase (RefSeq) insig. 65 76
  Castellaniella sp019104865 MT123 ABCV34_RS13900 pseudouridine synthase insig. 63 77
  Escherichia fergusonii Becca EFB2_02840 Ribosomal large subunit pseudouridine synthase E insig. 61 78
  Escherichia coli ECOR38 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 60 78
  Escherichia coli BL21 ECD_01133 23S rRNA pseudouridine(2457) synthase insig. 61 78
  Rahnella sp. WP5 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE insig. 58 78
  Shewanella loihica PV-4 Shew_1562 pseudouridylate synthase (RefSeq) insig. 60 77
  Escherichia coli ECOR27 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 59 78
  Escherichia coli ECRC62 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 59 78
  Escherichia coli BW25113 b1135 ymfC orf, hypothetical protein (VIMSS) sig. 59 78
  Kangiella aquimarina DSM 16071 B158DRAFT_1837 ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-) insig. 57 79
  Escherichia coli ECRC101 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 59 78
  Escherichia coli ECRC101 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 59 78
  Escherichia coli ECRC102 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 59 78
  Escherichia coli ECRC98 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 59 78
  Escherichia coli ECRC99 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 59 78
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 58 78
o Shewanella amazonensis SB2B Sama_2060 pseudouridylate synthase (RefSeq) insig. 58 81
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E insig. 59 78
  Shewanella sp. ANA-3 Shewana3_1749 ribosomal large subunit pseudouridine synthase E (RefSeq) insig. 57 78
  Enterobacter asburiae PDN3 EX28DRAFT_1795 pseudouridine synthase insig. 59 78
  Klebsiella michiganensis M5al BWI76_RS11325 23S rRNA pseudouridine synthase E no data 59 78
  Enterobacter sp. TBS_079 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E insig. 59 78
  Pectobacterium carotovorum WPP14 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE insig. 56 78
  Dickeya dianthicola ME23 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE insig. 57 78
o Rhodospirillum rubrum S1H Rru_A1939 Pseudouridine synthase, Rsu (NCBI) insig. 61 78
  Synechococcus elongatus PCC 7942 Synpcc7942_1514 Pseudouridine synthase, Rsu sig. 58 79
  Dickeya dadantii 3937 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE insig. 55 78
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 57 78
  Lysobacter sp. OAE881 ABIE51_RS00615 pseudouridine synthase insig. 61 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.351.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 59 76
  Dickeya dianthicola 67-19 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE insig. 57 78
  Serratia liquefaciens MT49 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE insig. 55 78
  Pantoea sp. MT58 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE insig. 57 78
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09950 pseudouridine synthase insig. 61 75
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase insig. 56 78
  Rhodanobacter denitrificans MT42 LRK55_RS09590 pseudouridine synthase insig. 61 75
  Paraburkholderia graminis OAS925 ABIE53_003318 23S rRNA pseudouridine2457 synthase insig. 55 79
o Cupriavidus basilensis FW507-4G11 RR42_RS17140 pseudouridine synthase insig. 52 87
  Erwinia tracheiphila SCR3 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 56 78
  Burkholderia phytofirmans PsJN BPHYT_RS15735 pseudouridine synthase insig. 56 75
  Acinetobacter radioresistens SK82 MPMX26_01011 hypothetical protein insig. 52 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS02975 pseudouridine synthase insig. 53 78
  Herbaspirillum seropedicae SmR1 HSERO_RS07010 pseudouridine synthase insig. 55 78
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13170 pseudouridine synthase insig. 55 75
  Marinobacter adhaerens HP15 HP15_2084 RNA pseudouridylate synthase insig. 61 69
  Rhodanobacter sp. FW510-T8 OKGIIK_16200 Pseudouridine synthase insig. 61 75
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 52 78
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1556 pseudouridine synthase insig. 42 95
  Shewanella loihica PV-4 Shew_0814 pseudouridine synthase (RefSeq) insig. 39 75
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08260 pseudouridine synthase insig. 37 78
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 36 80
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase insig. 34 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 34 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 36 77
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 36 77
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 35 78
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 36 77
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 35 79
  Rhodospirillum rubrum S1H Rru_A0652 Pseudouridine synthase, Rsu (NCBI) cofit 32 78
  Variovorax sp. SCN45 GFF7619 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no data 38 66
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 33 78
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4868 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) cofit 40 61
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 34 75
  Dechlorosoma suillum PS Dsui_2725 pseudouridine synthase family protein no data 33 73
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 30 80
  Magnetospirillum magneticum AMB-1 AMB_RS20865 rRNA pseudouridine synthase cofit 30 80
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 36 76
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 34 80
  Herbaspirillum seropedicae SmR1 HSERO_RS18010 pseudouridine synthase strong 34 80
  Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 27 69
  Acidovorax sp. GW101-3H11 Ac3H11_1789 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) no data 38 63
  Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 33 76
  Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 35 76
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 34 63
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 33 72
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 33 83