| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas stutzeri RCH2 | Psest_1071 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | strong | 100 | 100 |
| o | Pseudomonas segetis P6 | ACVTMO_RS03895 | | sigma-54 interaction domain-containing protein | insig. | 79 | 100 |
| o | Azospirillum sp. SherDot2 | MPMX19_06065 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 53 | 95 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS21185 | | Fis family transcriptional regulator | insig. | 52 | 96 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03547 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains | insig. | 52 | 94 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS34340 | | Fis family transcriptional regulator | strong | 51 | 94 |
| | Azospirillum sp. SherDot2 | MPMX19_05582 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 53 | 96 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004708 | | transcriptional regulator with PAS, ATPase and Fis domain | insig. | 51 | 94 |
| o | Acidovorax sp. GW101-3H11 | Ac3H11_63 | | Sigma-54 dependent transcriptional regulator | insig. | 51 | 93 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2039 | | Sigma-54 dependent transcriptional regulator | sig. | 50 | 96 |
| o | Variovorax sp. OAS795 | ABID97_RS17700 | | sigma 54-interacting transcriptional regulator | insig. | 50 | 95 |
| o | Variovorax sp. SCN45 | GFF518 | | Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains | insig. | 50 | 94 |
| o | Pseudomonas sp. SVBP6 | COO64_RS23875 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 50 | 96 |
| o | Pseudomonas sp. S08-1 | OH686_00830 | | Transcriptional regulator | cofit | 49 | 96 |
| o | Pseudomonas sp. DMC3 | GFF3656 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 49 | 96 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_00410 | | Fis family transcriptional regulator | sig. | 48 | 96 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS17125 | | sigma 54-interacting transcriptional regulator | insig. | 50 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_21780 | | Fis family transcriptional regulator | insig. | 48 | 96 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2875 | | Sigma-54 dependent transcriptional regulator | strong | 48 | 96 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5631 | | Sigma-54 dependent transcriptional regulator | insig. | 48 | 96 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS10735 | | Fis family transcriptional regulator | insig. | 51 | 95 |
| o | Pseudomonas sp. RS175 | PFR28_01397 | | Anaerobic nitric oxide reductase transcription regulator NorR | sig. | 48 | 96 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5124 | | Sigma-54 dependent transcriptional regulator | insig. | 51 | 93 |
| o | Pseudomonas protegens RBAN4 | FABNJH_18365 | | Signal-transduction and transcriptional-control protein Stc | insig. | 47 | 96 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_09800 | | sigma-54-dependent transcriptional regulator HbcR | insig. | 49 | 96 |
| o | Pseudomonas orientalis W4I3 | QF045_RS14150 | | sigma 54-interacting transcriptional regulator | cofit | 47 | 95 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS16210 | hbcR;inference=COORDINATES | sigma-54-dependent transcriptional regulator HbcR | insig. | 49 | 96 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS38530 | hbcR;inference=COORDINATES | sigma-54-dependent transcriptional regulator HbcR | insig. | 48 | 96 |
| o | Pseudomonas simiae WCS417 | PS417_12160 | | Fis family transcriptional regulator | insig. | 47 | 96 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03364 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 46 | 96 |
| o | Pseudomonas putida KT2440 | PP_3075 | | putative transcriptional regulator | strong | 49 | 95 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 47 | 96 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS12850 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 47 | 96 |
| o | Marinobacter adhaerens HP15 | HP15_3793 | | protein containing RNA polymerase sigma factor 54, interaction / helix-turn-helix, Fis-type | insig. | 49 | 93 |
| | Azospirillum sp. SherDot2 | MPMX19_03130 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 46 | 94 |
| | Azospirillum brasilense Sp245 | AZOBR_RS26990 | | Fis family transcriptional regulator | insig. | 45 | 93 |
| o | Xanthobacter sp. DMC5 | GFF2822 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 43 | 96 |
| o | Desulfovibrio vulgaris Miyazaki F | DvMF_1933 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 38 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11255 | | Fis family transcriptional regulator | strong | 41 | 93 |
| | Pseudomonas orientalis W4I3 | QF045_RS13490 | | sigma 54-interacting transcriptional regulator | insig. | 41 | 92 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | insig. | 43 | 69 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 43 | 69 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 43 | 69 |
| | Methylophilus sp. DMC18 | GFF2815 | | Regulatory protein AtoC | insig. | 47 | 70 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | insig. | 43 | 69 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 43 | 69 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 43 | 69 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 44 | 69 |
| | Pseudomonas sp. RS175 | PFR28_02055 | | Anaerobic nitric oxide reductase transcription regulator NorR | insig. | 51 | 68 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 46 | 66 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02520 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 43 | 78 |
| | Pseudomonas sp. SVBP6 | COO64_RS07975 | | sigma-54 dependent transcriptional regulator | insig. | 50 | 65 |
| | Pseudomonas simiae WCS417 | PS417_11085 | | ATPase AAA | insig. | 46 | 68 |
| | Pseudomonas putida KT2440 | PP_2790 | | Sigma-54 dependent sensory box protein | strong | 38 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1790 | | Sigma-54 dependent transcriptional regulator | insig. | 39 | 92 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2153 | | PAS modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) | insig. | 37 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS01330 | | Fis family transcriptional regulator | insig. | 38 | 93 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS11715 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 46 | 68 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS11715 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 46 | 68 |
| | Caulobacter crescentus NA1000 | CCNA_03424 | | AAA-family response regulator tacA | strong | 43 | 69 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03424 | | AAA-family response regulator tacA | cofit | 43 | 69 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS12970 | | PEP-CTERM-box response regulator transcription factor | cofit | 42 | 75 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS23170 | | ATPase AAA | insig. | 46 | 66 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4389 | | Sigma-54 dependent transcriptional regulator | insig. | 46 | 68 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS13270 | | PEP-CTERM-box response regulator transcription factor | insig. | 43 | 75 |
| | Pseudomonas protegens RBAN4 | FABNJH_28375 | tyrR | Transcriptional regulatory protein TyrR | insig. | 36 | 92 |
| | Methylophilus sp. DMC18 | GFF1426 | | Transcriptional regulatory protein ZraR | insig. | 46 | 66 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF896 | | Response regulator of zinc sigma-54-dependent two-component system | cofit | 36 | 93 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS38225 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 71 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2095 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 52 | 49 |
| | Azospirillum sp. SherDot2 | MPMX19_05290 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 43 | 70 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS28740 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 71 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS15305 | | PEP-CTERM-box response regulator transcription factor | insig. | 42 | 75 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 44 | 66 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS24385 | zraR;go_function=sequence-specific | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 72 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 72 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_29210 | | AAA family ATPase | insig. | 41 | 82 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 47 | 65 |
| | Dechlorosoma suillum PS | Dsui_3467 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 47 | 65 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF595 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 45 | 66 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_09495 | | Fis family transcriptional regulator | insig. | 42 | 71 |
| | Rhodospirillum rubrum S1H | Rru_A1385 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | cofit | 41 | 76 |
| | Azospirillum brasilense Sp245 | AZOBR_RS18445 | | chemotaxis protein CheY | insig. | 41 | 82 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01040 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 39 | 76 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39600 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 92 |
| | Azospirillum sp. SherDot2 | MPMX19_03494 | | Regulatory protein AtoC | insig. | 45 | 71 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS17365 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 92 |
| | Pantoea sp. MT58 | IAI47_19790 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 68 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 46 | 70 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10840 | | propionate catabolism operon regulatory protein PrpR | sig. | 38 | 92 |
| | Pseudomonas sp. BP01 | JOY50_RS25235 | prpR | propionate catabolism operon regulatory protein PrpR | insig. | 44 | 68 |
| | Paraburkholderia graminis OAS925 | ABIE53_004383 | | transcriptional regulator of acetoin/glycerol metabolism | strong | 43 | 69 |
| | Klebsiella michiganensis M5al | BWI76_RS10230 | | AAA family ATPase | no data | 42 | 67 |
| | Xanthobacter sp. DMC5 | GFF4834 | | Regulatory protein AtoC | insig. | 40 | 80 |
| | Shewanella amazonensis SB2B | Sama_1549 | | response regulator receiver protein (RefSeq) | insig. | 39 | 82 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01779 | | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | insig. | 38 | 89 |
| | Xanthobacter sp. DMC5 | GFF4433 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 45 | 65 |
| | Escherichia coli ECOR38 | HEPCGN_21015 | hyfR | DNA-binding transcriptional activator HyfR | insig. | 44 | 72 |
| | Escherichia coli BL21 | ECD_02383 | | hydrogenase-4 transcriptional activator | cofit | 43 | 72 |
| | Escherichia coli BW25113 | b2491 | hyfR | putative 2-component regulator, interaction with sigma 54 (VIMSS) | sig. | 43 | 72 |
| | Escherichia coli ECRC62 | BNILDI_12310 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 43 | 72 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01235 | | DNA-binding transcriptional activator HyfR | cofit | 43 | 72 |
| | Escherichia coli ECRC100 | OKFHMN_21850 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 43 | 72 |
| | Escherichia coli ECRC101 | MCAODC_12380 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 43 | 72 |
| | Escherichia coli ECRC102 | NIAGMN_19620 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 43 | 72 |
| | Escherichia coli ECRC98 | JDDGAC_25795 | hyfR | DNA-binding transcriptional regulator HyfR | insig. | 43 | 72 |
| | Escherichia coli ECRC99 | KEDOAH_06370 | hyfR | DNA-binding transcriptional regulator HyfR | no data | 43 | 72 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4019 | | Sigma-54 dependent transcriptional regulator | cofit | 47 | 63 |
| | Serratia liquefaciens MT49 | IAI46_12235 | | sigma 54-interacting transcriptional regulator | insig. | 46 | 67 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 44 | 66 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS14390 | | ATPase AAA | strong | 41 | 70 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 44 | 71 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34130 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 91 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVUA0143 | nifA-2 | nif-specific regulatory protein (TIGR) | strong | 45 | 72 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 44 | 66 |
| | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 66 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 45 | 70 |
| | Enterobacter sp. TBS_079 | MPMX20_03423 | | Transcriptional regulatory protein QseF | sig. | 45 | 66 |
| | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 44 | 66 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 66 |
| | Pseudomonas putida KT2440 | PP_0263 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 46 | 66 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2455 | | Putative sensory histidine kinase YfhA | strong | 45 | 66 |
| | Azospirillum brasilense Sp245 | AZOBR_RS29300 | | Fis family transcriptional regulator | insig. | 41 | 71 |
| | Rhodospirillum rubrum S1H | Rru_A1678 | | Nitrogen Metabolism Transcriptional Regulator, NtrC, Fis Family (NCBI) | strong | 44 | 65 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2894 | flrA | sigma-54 dependent transcriptional regulator (TIGR) | strong | 43 | 66 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 43 | 72 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1930 | | Transcriptional regulatory protein zraR | insig. | 46 | 67 |
| | Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 46 | 64 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0096 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | sig. | 45 | 66 |
| | Pseudomonas sp. BP01 | JOY50_RS26420 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 66 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2601 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 44 | 66 |
| | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 43 | 66 |
| | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 46 | 63 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 45 | 70 |
| | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 44 | 66 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS04840 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 66 |
| | Marinobacter adhaerens HP15 | HP15_1891 | | two component, sigma54 specific, transcriptional regulator, Fis family | insig. | 40 | 75 |
| | Escherichia coli BL21 | ECD_02446 | | response regulator regulating glmY sRNA in two-component system with sensor protein GlrK | sig. | 45 | 66 |
| | Escherichia coli ECRC100 | OKFHMN_21495 | qseF | two-component system response regulator QseF/GlrR | cofit | 45 | 66 |
| | Escherichia coli ECRC101 | MCAODC_12025 | qseF | two-component system response regulator QseF/GlrR | cofit | 45 | 66 |
| | Escherichia coli ECRC102 | NIAGMN_19265 | qseF | two-component system response regulator QseF/GlrR | cofit | 45 | 66 |
| | Escherichia coli ECRC98 | JDDGAC_25160 | qseF | two-component system response regulator QseF/GlrR | cofit | 45 | 66 |
| | Escherichia coli ECRC99 | KEDOAH_06725 | qseF | two-component system response regulator QseF/GlrR | no data | 45 | 66 |
| | Escherichia coli BW25113 | b2554 | yfhA | predicted DNA-binding response regulator in two-component system (NCBI) | sig. | 45 | 66 |
| | Pseudomonas segetis P6 | ACVTMO_RS06070 | | sigma-54-dependent transcriptional regulator | no data | 44 | 67 |
| | Alteromonas macleodii MIT1002 | MIT1002_02086 | | Nif-specific regulatory protein | insig. | 40 | 74 |
| | Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 44 | 66 |
| | Escherichia coli ECRC100 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 44 | 66 |
| | Pseudomonas protegens RBAN4 | FABNJH_16045 | | Fis family transcriptional regulator | insig. | 43 | 66 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1324 | | sigma54 specific transcriptional regulator, Fis family (RefSeq) | strong | 43 | 66 |
| | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 44 | 66 |
| | Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 44 | 66 |
| | Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 44 | 66 |
| | Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 44 | 66 |
| | Pseudomonas protegens RBAN4 | FABNJH_26825 | pilR | Putative sigma-54 dependent DNA-binding response regulator PilR | insig. | 45 | 66 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS11445 | | Fis family transcriptional regulator | sig. | 49 | 62 |
| | Rhodospirillum rubrum S1H | Rru_A0540 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | insig. | 45 | 66 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 66 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 45 | 66 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS15665 | | propionate catabolism operon regulatory protein PrpR | insig. | 44 | 71 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02740 | | Regulatory protein AtoC | cofit | 43 | 66 |
| | Escherichia fergusonii Becca | EFB2_01342 | | Transcriptional regulatory protein QseF | insig. | 44 | 66 |
| | Escherichia coli ECOR27 | NOLOHH_13170 | qseF | two-component system response regulator QseF/GlrR | strong | 44 | 66 |
| | Escherichia coli ECRC62 | BNILDI_11970 | qseF | two-component system response regulator QseF/GlrR | strong | 44 | 66 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01153 | | Transcriptional regulatory protein GlrR | insig. | 44 | 66 |
| | Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 43 | 67 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS09370 | cbrB;inference=COORDINATES | two-component system response regulator CbrB | strong | 42 | 67 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_29980 | | two-component system response regulator CbrB | strong | 42 | 67 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS52660 | cbrB;inference=COORDINATES | two-component system response regulator CbrB | strong | 42 | 67 |
| | Shewanella loihica PV-4 | Shew_2341 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | insig. | 42 | 72 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS14380 | | sigma-54 dependent transcriptional regulator | insig. | 37 | 88 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 55 | 46 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 45 | 66 |
| | Escherichia coli ECOR38 | HEPCGN_20640 | qseF | two-component system response regulator QseF/GlrR | strong | 44 | 66 |
| | Pseudomonas orientalis W4I3 | QF045_RS17445 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 66 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00325 | | GAF modulated sigma54 specific transcriptional regulator, Fis family | insig. | 46 | 65 |
| | Pseudomonas protegens RBAN4 | FABNJH_01565 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 45 | 67 |
| | Methylophilus sp. DMC18 | GFF2024 | | DNA-binding transcriptional regulator NtrC | strong | 44 | 66 |
| | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 66 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2114 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 42 | 71 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 45 | 66 |
| | Pseudomonas simiae WCS417 | PS417_15295 | | Fis family transcriptional regulator | insig. | 45 | 69 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 45 | 68 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_28370 | | two-component system response regulator QseF/GlrR | insig. | 44 | 66 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS04790 | glrR;go_function=ATP | two-component system response regulator GlrR | sig. | 44 | 66 |
| | Pseudomonas segetis P6 | ACVTMO_RS00675 | | sigma-54 interaction domain-containing protein | insig. | 44 | 66 |
| | Dechlorosoma suillum PS | Dsui_0940 | | Nif-specific regulatory protein | strong | 44 | 62 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1666 | | C4-dicarboxylate transport transcriptional regulatory protein | sig. | 43 | 74 |
| | Pseudomonas simiae WCS417 | PS417_12465 | | Fis family transcriptional regulator | insig. | 43 | 66 |
| | Pseudomonas sp. SVBP6 | COO64_RS14675 | | sigma-54 dependent transcriptional regulator | insig. | 43 | 66 |
| | Pseudomonas orientalis W4I3 | QF045_RS04425 | | sigma-54 dependent transcriptional regulator | cofit | 45 | 66 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 45 | 66 |
| | Rahnella sp. WP5 | EX31_RS20615 | | two-component system response regulator GlrR | insig. | 44 | 66 |
| | Klebsiella michiganensis M5al | BWI76_RS21250 | | two-component system response regulator GlrR | strong | 44 | 66 |
| | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 43 | 66 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13155 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 43 | 66 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13155 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 43 | 66 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT1529 | | two-component system response regulator (NCBI ptt file) | strong | 42 | 66 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4731 | | Sigma-54 dependent transcriptional regulator | sig. | 42 | 66 |
| | Azospirillum sp. SherDot2 | MPMX19_03559 | | Acetoin dehydrogenase operon transcriptional activator AcoR | insig. | 42 | 68 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.877.1 | | hypothetical protein | insig. | 38 | 92 |
| | Pectobacterium carotovorum WPP14 | HER17_RS05925 | | two-component system response regulator GlrR | cofit | 45 | 66 |
| | Dickeya dadantii 3937 | DDA3937_RS15640 | | two-component system response regulator GlrR | cofit | 44 | 66 |
| | Dickeya dianthicola ME23 | DZA65_RS16815 | | two-component system response regulator GlrR | insig. | 44 | 66 |
| | Pseudomonas sp. DMC3 | GFF451 | | Anaerobic nitric oxide reductase transcription regulator NorR | cofit | 44 | 68 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS14455 | | two-component system response regulator GlrR | strong | 44 | 66 |
| | Pseudomonas sp. DMC3 | GFF4159 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 43 | 74 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04163 | | Anaerobic nitric oxide reductase transcription regulator NorR | strong | 41 | 67 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS15930 | | sigma-54-dependent Fis family transcriptional regulator | strong | 47 | 63 |
| | Dickeya dianthicola 67-19 | HGI48_RS15735 | | two-component system response regulator GlrR | insig. | 44 | 66 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3006 | | Sigma-54 dependent transcriptional regulator | insig. | 42 | 66 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2210 | | Hydrogenase transcriptional regulatory protein HoxA | insig. | 47 | 64 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16075 | | Fis family transcriptional regulator | strong | 43 | 67 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_25810 | | Fis family transcriptional regulator | insig. | 43 | 66 |
| | Pseudomonas orientalis W4I3 | QF045_RS24815 | | sigma-54 dependent transcriptional regulator | insig. | 46 | 66 |
| | Serratia liquefaciens MT49 | IAI46_19460 | | two-component system response regulator GlrR | sig. | 43 | 66 |
| | Pseudomonas sp. RS175 | PFR28_03718 | | Transcriptional regulatory protein ZraR | strong | 43 | 67 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5156 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 43 | 67 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04930 | | Transcriptional regulatory protein ZraR | cofit | 42 | 67 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2827 | | sigma-54 dependent transcriptional regulator (TIGR) | insig. | 35 | 94 |
| | Pseudomonas sp. BP01 | JOY50_RS00695 | | sigma-54 dependent transcriptional regulator | insig. | 46 | 66 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 43 | 66 |
| | Pseudomonas sp. S08-1 | OH686_06630 | | T6SS sigma-54-dependent regulator VasH | insig. | 45 | 69 |
| | Pseudomonas simiae WCS417 | PS417_01305 | | Fis family transcriptional regulator | sig. | 45 | 66 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_11860 | | Fis family transcriptional regulator | strong | 43 | 70 |
| | Escherichia coli ECOR27 | NOLOHH_13500 | | Fis family transcriptional regulator | insig. | 46 | 65 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS17400 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 46 | 65 |
| | Ralstonia solanacearum GMI1000 | RS_RS25105 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 43 | 66 |
| | Pseudomonas simiae WCS417 | PS417_23895 | | Fis family transcriptional regulator | no data | 42 | 67 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_04264 | | Sigma-54 interaction domain protein | insig. | 41 | 70 |
| | Serratia liquefaciens MT49 | IAI46_07205 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 46 | 65 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_03460 | | AAA family ATPase | insig. | 46 | 65 |
| | Pantoea sp. MT58 | IAI47_04945 | | two-component system response regulator GlrR | sig. | 44 | 66 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS03980 | | Fis family transcriptional regulator | strong | 43 | 71 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 41 | 71 |
| | Pseudomonas protegens RBAN4 | FABNJH_08495 | atoC | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | insig. | 41 | 67 |
| | Agrobacterium fabrum C58 | Atu3296 | | two component response regulator for C4-dicarboxylate transport | strong | 40 | 66 |
| | Pseudomonas simiae WCS417 | PS417_19825 | | ATPase AAA | strong | 40 | 67 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS26850 | | ATPase AAA | strong | 40 | 85 |
| | Pseudomonas stutzeri RCH2 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 39 | 77 |
| | Sinorhizobium meliloti 1021 | SMc01043 | | nitrogen assimilation regulatory protein | strong | 42 | 66 |
| | Pseudomonas orientalis W4I3 | QF045_RS21955 | | sigma-54 dependent transcriptional regulator | cofit | 41 | 67 |
| | Pseudomonas sp. BP01 | JOY50_RS05065 | sfnR | sigma54-dependent transcriptional activator SfnR | insig. | 58 | 44 |
| | Pseudomonas sp. SVBP6 | COO64_RS21290 | | sigma-54 dependent transcriptional regulator | insig. | 46 | 66 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2359 | | sigma-54 dependent transcriptional regulator (TIGR) | insig. | 45 | 67 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00486 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 44 | 66 |
| | Pseudomonas sp. BP01 | JOY50_RS27675 | | sigma-54 dependent transcriptional regulator | cofit | 43 | 67 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS23315 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 66 |
| | Ralstonia solanacearum UW163 | UW163_RS16565 | | sigma-54-dependent Fis family transcriptional regulator | strong | 43 | 66 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16265 | | Fis family transcriptional regulator | strong | 41 | 74 |