| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dechlorosoma suillum PS | Dsui_3335 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 100 | 100 |
| | Dechlorosoma suillum PS | Dsui_3333 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 60 | 98 |
| | Dechlorosoma suillum PS | Dsui_2046 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 33 | 58 |
| | Pseudomonas sp. S08-1 | OH686_08940 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 38 | 44 |
| | Dechlorosoma suillum PS | Dsui_1885 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 40 | 45 |
| | Dechlorosoma suillum PS | Dsui_1890 | | diguanylate cyclase (GGDEF) domain-containing protein | insig. | 39 | 43 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3165 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 37 | 42 |
| | Pseudomonas sp. S08-1 | OH686_08945 | | hypothetical protein | cofit | 36 | 43 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2768.1 | | hypothetical protein | strong | 37 | 41 |
| | Pseudomonas orientalis W4I3 | QF045_RS08375 | | response regulator | insig. | 37 | 41 |
| | Paraburkholderia graminis OAS925 | ABIE53_006006 | | adenylate cyclase | sig. | 34 | 47 |
| | Pseudomonas putida KT2440 | PP_2942 | | Response regulator | insig. | 36 | 43 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5467 | | Response regulator | sig. | 32 | 43 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17715 | | chemotaxis protein CheY | insig. | 32 | 43 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02781 | | Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains | insig. | 36 | 37 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16190 | | chemotaxis protein CheY | insig. | 35 | 40 |
| | Pseudomonas sp. S08-1 | OH686_08910 | | Phytochrome-like protein / Cph2 | cofit | 36 | 39 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_788 | | Response regulator | insig. | 36 | 40 |
| | Pseudomonas simiae WCS417 | PS417_05440 | | chemotaxis protein CheY | insig. | 35 | 43 |
| | Pseudomonas sp. RS175 | PFR28_03482 | | Sensor histidine kinase RcsC | cofit | 31 | 43 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05525 | | response regulator | insig. | 40 | 39 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05525 | | response regulator | insig. | 40 | 39 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01276 | | Regulator of RpoS | cofit | 40 | 39 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05525 | | transcriptional regulator | insig. | 39 | 39 |
| | Dechlorosoma suillum PS | Dsui_3333 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 39 | 31 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3168 | | Response regulator | insig. | 34 | 46 |
| | Pseudomonas sp. SVBP6 | COO64_RS20885 | | HD domain-containing phosphohydrolase | insig. | 36 | 38 |
| | Dechlorosoma suillum PS | Dsui_1886 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 41 | 33 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05530 | | two-component system response regulator | cofit | 32 | 43 |
| | Lysobacter sp. OAE881 | ABIE51_RS16595 | | EAL domain-containing protein | cofit | 35 | 39 |
| | Dechlorosoma suillum PS | Dsui_3334 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 31 | 46 |
| | Pseudomonas segetis P6 | ACVTMO_RS10700 | | response regulator | insig. | 24 | 92 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16850 | | HD domain-containing phosphohydrolase | insig. | 33 | 47 |
| | Pseudomonas sp. S08-1 | OH686_08925 | | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | cofit | 29 | 51 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02585 | | response regulator | insig. | 26 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14640 | | two-component system response regulator | insig. | 26 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS33010 | | response regulator | insig. | 26 | 95 |
| | Pseudomonas sp. S08-1 | OH686_08940 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 31 | 51 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05625 | | two-component system response regulator | insig. | 31 | 47 |
| | Shewanella oneidensis MR-1 | SO2541 | | response regulator (NCBI ptt file) | insig. | 30 | 42 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2271 | | His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | strong | 31 | 37 |
| | Dechlorosoma suillum PS | Dsui_1890 | | diguanylate cyclase (GGDEF) domain-containing protein | insig. | 34 | 37 |
| | Dickeya dadantii 3937 | DDA3937_RS10180 | | response regulator | insig. | 31 | 42 |
| | Dickeya dianthicola 67-19 | HGI48_RS10210 | | response regulator | insig. | 33 | 42 |
| | Dickeya dianthicola ME23 | DZA65_RS10630 | | response regulator | insig. | 33 | 42 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05355 | | response regulator receiver modulated metal-depenent phosphohydrolase | insig. | 32 | 41 |
| | Rhodospirillum rubrum S1H | Rru_A0692 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 32 | 40 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05335 | | response regulator | cofit | 34 | 45 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS04750 | | two-component system response regulator | insig. | 37 | 37 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS35650 | | two-component system response regulator | insig. | 37 | 37 |
| | Alteromonas macleodii MIT1002 | MIT1002_03637 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 34 | 36 |
| | Dechlorosoma suillum PS | Dsui_3334 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 28 | 52 |
| | Shewanella oneidensis MR-1 | SO2539 | | response regulator (NCBI ptt file) | insig. | 33 | 40 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS18645 | | chemotaxis protein CheY | insig. | 32 | 44 |
| | Rhodospirillum rubrum S1H | Rru_A0691 | | Predicted signal transduction protein (NCBI) | insig. | 34 | 45 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12885 | | two-component system response regulator | insig. | 37 | 37 |
| | Pseudomonas sp. S08-1 | OH686_08910 | | Phytochrome-like protein / Cph2 | cofit | 29 | 50 |
| | Paraburkholderia graminis OAS925 | ABIE53_006006 | | adenylate cyclase | sig. | 29 | 48 |
| | Marinobacter adhaerens HP15 | HP15_3664 | | response regulator receiver modulated metal dependent phosphohydrolase | cofit | 29 | 44 |
| | Pseudomonas protegens RBAN4 | FABNJH_17025 | | Response regulator | insig. | 32 | 42 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14880 | | response regulator receiver modulated metal-depenent phosphohydrolase | cofit | 32 | 41 |
| | Azospirillum sp. SherDot2 | MPMX19_05290 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 31 | 45 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2210 | | Hydrogenase transcriptional regulatory protein HoxA | insig. | 33 | 43 |
| | Shewanella oneidensis MR-1 | SO2541 | | response regulator (NCBI ptt file) | insig. | 29 | 51 |
| | Dechlorosoma suillum PS | Dsui_2046 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 29 | 50 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14875 | | response regulator | insig. | 37 | 32 |
| | Pseudomonas protegens RBAN4 | FABNJH_24750 | | Response regulator/HD domain protein | insig. | 30 | 45 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS16850 | | HD domain-containing phosphohydrolase | insig. | 28 | 48 |
| | Lysobacter sp. OAE881 | ABIE51_RS16595 | | EAL domain-containing protein | cofit | 37 | 26 |
| | Pseudomonas sp. S08-1 | OH686_00995 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 31 | 41 |
| | Pseudomonas sp. S08-1 | OH686_08925 | | Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB | cofit | 28 | 48 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02781 | | Response regulator c-di-GMP phosphodiesterase, RpfG family, contains REC and HD-GYP domains | insig. | 28 | 48 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS14555 | | response regulator | strong | 24 | 45 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09930 | | hybrid sensor histidine kinase/response regulator | cofit | 32 | 41 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11550 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 30 | 44 |
| | Dechlorosoma suillum PS | Dsui_1885 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 29 | 47 |
| | Xanthobacter sp. DMC5 | GFF4433 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 26 | 63 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05625 | | two-component system response regulator | insig. | 28 | 48 |
| | Variovorax sp. OAS795 | ABID97_RS13590 | | sigma-54 dependent transcriptional regulator | insig. | 32 | 37 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3168 | | Response regulator | insig. | 31 | 46 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05355 | | response regulator receiver modulated metal-depenent phosphohydrolase | insig. | 27 | 48 |
| | Agrobacterium fabrum C58 | Atu0114 | | two component response regulator | insig. | 31 | 45 |
| | Pseudomonas sp. S08-1 | OH686_08945 | | hypothetical protein | cofit | 31 | 49 |
| | Dickeya dianthicola 67-19 | HGI48_RS10210 | | response regulator | insig. | 26 | 49 |
| | Dickeya dianthicola ME23 | DZA65_RS10630 | | response regulator | insig. | 26 | 49 |
| | Dickeya dianthicola ME23 | DZA65_RS10635 | | HDOD domain-containing protein | insig. | 29 | 51 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05525 | | response regulator | insig. | 30 | 44 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05525 | | response regulator | insig. | 30 | 44 |
| | Alteromonas macleodii MIT1002 | MIT1002_03637 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 24 | 52 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_788 | | Response regulator | insig. | 29 | 46 |
| | Shewanella oneidensis MR-1 | SO2539 | | response regulator (NCBI ptt file) | insig. | 29 | 44 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.2768.1 | | hypothetical protein | strong | 33 | 30 |
| | Pseudomonas sp. SVBP6 | COO64_RS20885 | | HD domain-containing phosphohydrolase | insig. | 29 | 50 |
| | Pseudomonas sp. RS175 | PFR28_03482 | | Sensor histidine kinase RcsC | cofit | 29 | 44 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17715 | | chemotaxis protein CheY | insig. | 29 | 44 |
| | Dickeya dianthicola 67-19 | HGI48_RS10215 | | HDOD domain-containing protein | insig. | 29 | 50 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 35 | 40 |
| | Rhodopseudomonas palustris CGA009 | TX73_005040 | | sigma-54 dependent transcriptional regulator | insig. | 31 | 33 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05530 | | two-component system response regulator | cofit | 35 | 25 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS05665 | | FAD-dependent oxidoreductase | cofit | 31 | 33 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14880 | | response regulator receiver modulated metal-depenent phosphohydrolase | cofit | 32 | 29 |
| | Dickeya dadantii 3937 | DDA3937_RS10185 | | HDOD domain-containing protein | insig. | 29 | 45 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5467 | | Response regulator | sig. | 28 | 44 |
| | Dickeya dadantii 3937 | DDA3937_RS10180 | | response regulator | insig. | 26 | 51 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3165 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 30 | 30 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0332 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 30 | 33 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS20000 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 28 | 40 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16190 | | chemotaxis protein CheY | insig. | 29 | 48 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 30 | 41 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 30 | 41 |
| | Pseudomonas orientalis W4I3 | QF045_RS08375 | | response regulator | insig. | 28 | 47 |
| | Azospirillum sp. SherDot2 | MPMX19_04251 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 32 | 37 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01292 | | Regulatory protein AtoC | cofit | 30 | 41 |
| | Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 30 | 41 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0539 | | sigma-54 dependent DNA-binding response regulator (TIGR) | sig. | 27 | 51 |
| | Xanthobacter sp. DMC5 | GFF3675 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 31 | 37 |
| | Dechlorosoma suillum PS | Dsui_1154 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 31 | 37 |
| | Pseudomonas protegens RBAN4 | FABNJH_17025 | | Response regulator | insig. | 27 | 47 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2210 | | Hydrogenase transcriptional regulatory protein HoxA | insig. | 33 | 34 |
| | Rhodospirillum rubrum S1H | Rru_A0692 | | Response regulator receiver domain protein (CheY) (NCBI) | insig. | 32 | 33 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2394 | ntrC1 | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 30 | 33 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01276 | | Regulator of RpoS | cofit | 29 | 44 |
| | Pseudomonas sp. S08-1 | OH686_00995 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 27 | 52 |
| | Azospirillum sp. SherDot2 | MPMX19_05290 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 40 | 22 |
| | Pseudomonas segetis P6 | ACVTMO_RS01055 | | sigma-54-dependent transcriptional regulator | insig. | 32 | 41 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS14555 | | response regulator | strong | 30 | 32 |
| | Pseudomonas putida KT2440 | PP_2942 | | Response regulator | insig. | 29 | 48 |
| | Marinobacter adhaerens HP15 | HP15_3664 | | response regulator receiver modulated metal dependent phosphohydrolase | cofit | 28 | 33 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 28 | 42 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 30 | 37 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02495 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 30 | 43 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 27 | 69 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 26 | 43 |
| | Pseudomonas simiae WCS417 | PS417_05440 | | chemotaxis protein CheY | insig. | 28 | 44 |
| | Sphingobium sp. HT1-2 | GFF1148 | | Nitrogen regulation protein NR(I), GlnG (=NtrC) | strong | 31 | 38 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_14720 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 33 | 30 |
| | Xanthobacter sp. DMC5 | GFF4433 | | Hydrogenase transcriptional regulatory protein hupR1 | insig. | 32 | 39 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS24385 | zraR;go_function=sequence-specific | sigma-54-dependent response regulator transcription factor ZraR | insig. | 28 | 48 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS00090 | | sigma-54 dependent transcriptional regulator | cofit | 23 | 44 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1988 | | response regulator receiver protein (RefSeq) | sig. | 31 | 37 |
| | Sinorhizobium meliloti 1021 | SM_b21200 | | two-component response regulator protein | insig. | 31 | 37 |
| | Pseudomonas protegens RBAN4 | FABNJH_24715 | | Sigma-54-dependent Fis family transcriptional regulator | insig. | 27 | 43 |
| | Marinobacter adhaerens HP15 | HP15_806 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 27 | 40 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS17420 | | chemotaxis protein CheY | insig. | 33 | 40 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 32 | 37 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3215 | drrA | response regulator (TIGR) | insig. | 32 | 33 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2271 | | His Kinase A (phosphoacceptor) domain./Response regulator receiver domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. | strong | 32 | 26 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_00320 | | chemotaxis protein CheY | no data | 31 | 37 |
| | Azospirillum sp. SherDot2 | MPMX19_04512 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 27 | 41 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2550 | | multi-sensor signal transduction histidine kinase (RefSeq) | insig. | 32 | 40 |
| | Dinoroseobacter shibae DFL-12 | Dshi_1196 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 31 | 36 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30385 | | Fis family transcriptional regulator | insig. | 30 | 40 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2267 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 29 | 24 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS05325 | | chemotaxis protein CheY | insig. | 29 | 35 |
| | Rhizobium sp. OAE497 | ABIE40_RS26335 | | sigma-54 dependent transcriptional regulator | strong | 29 | 39 |
| | Pseudomonas orientalis W4I3 | QF045_RS08450 | | sigma-54 dependent transcriptional regulator | insig. | 29 | 41 |
| | Escherichia fergusonii Becca | EFB2_04538 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 31 | 43 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23460 | | sigma-54 dependent transcriptional regulator | cofit | 31 | 43 |
| | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 29 | 39 |
| | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 39 |
| | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 39 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 29 | 39 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 39 |
| | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 29 | 39 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0258 | | sensory box histidine kinase/response regulator (TIGR) | strong | 28 | 52 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0539 | | sigma-54 dependent DNA-binding response regulator (TIGR) | sig. | 25 | 43 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 33 | 33 |
| | Pseudomonas sp. BP01 | JOY50_RS14530 | | sigma-54 dependent transcriptional regulator | insig. | 29 | 41 |
| | Rhizobium sp. OAE497 | ABIE40_RS15425 | | sigma-54 dependent transcriptional regulator | strong | 28 | 38 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_10090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 27 | 48 |
| | Shewanella amazonensis SB2B | Sama_2267 | | response regulator receiver protein (RefSeq) | strong | 31 | 37 |
| | Pseudomonas sp. S08-1 | OH686_14355 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 31 | 32 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11550 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 30 | 32 |
| | Alteromonas macleodii MIT1002 | MIT1002_01326 | | Quorum-sensing regulator protein F | insig. | 26 | 38 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0330 | | response regulator (TIGR) | strong | 32 | 37 |
| | Pseudomonas putida KT2440 | PP_1401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 31 | 41 |
| | Pseudomonas protegens RBAN4 | FABNJH_24750 | | Response regulator/HD domain protein | insig. | 31 | 33 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS04415 | | sigma-54 dependent transcriptional regulator | cofit | 29 | 39 |
| | Pseudomonas sp. RS175 | PFR28_03462 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | strong | 28 | 41 |
| | Pseudomonas sp. DMC3 | GFF1302 | | Regulator of RpoS | no data | 28 | 40 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS04750 | | two-component system response regulator | insig. | 31 | 26 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS35650 | | two-component system response regulator | insig. | 31 | 26 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 30 | 41 |
| | Cellulophaga baltica 18 | M666_RS19210 | | sigma-54 dependent transcriptional regulator | insig. | 29 | 33 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS06360 | | chemotaxis protein CheY | insig. | 29 | 40 |
| | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 29 | 39 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_25855 | | DNA-binding response regulator | sig. | 28 | 39 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4011 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 28 | 40 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_60 | | Serine phosphatase RsbU, regulator of sigma subunit | no data | 28 | 40 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05345 | | two-component system response regulator | insig. | 33 | 37 |
| | Paraburkholderia graminis OAS925 | ABIE53_001082 | | two-component system probable response regulator PhcQ | sig. | 29 | 40 |
| | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 29 | 39 |
| | Sinorhizobium meliloti 1021 | SM_b20613 | | C4-dicarboxylate transport transcriptional regulator | strong | 33 | 36 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 30 | 41 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 30 | 41 |
| | Pseudomonas protegens RBAN4 | FABNJH_24290 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 32 | 37 |
| | Escherichia coli ECRC100 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 30 | 37 |
| | Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 30 | 37 |
| | Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 30 | 37 |
| | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 30 | 37 |
| | Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 30 | 37 |
| | Pseudomonas protegens RBAN4 | FABNJH_24290 | dctD | C4-dicarboxylate transport transcriptional regulatory protein DctD | insig. | 28 | 41 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2679 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 32 | 40 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3269 | | sensory box histidine kinase/response regulator (TIGR) | insig. | 32 | 38 |
| | Castellaniella sp019104865 MT123 | ABCV34_RS02725 | | sigma-54 dependent transcriptional regulator | insig. | 31 | 35 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0700 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 30 | 33 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_16520 | | DNA-binding response regulator | insig. | 28 | 33 |
| | Dechlorosoma suillum PS | Dsui_1886 | | response regulator containing a CheY-like receiver domain and an HD-GYP domain | cofit | 26 | 39 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16810 | | Fis family transcriptional regulator | strong | 28 | 37 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05525 | | transcriptional regulator | insig. | 26 | 44 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 36 | 26 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS01400 | | sigma-54-dependent Fis family transcriptional regulator | strong | 36 | 26 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00486 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | cofit | 36 | 26 |
| | Pseudomonas orientalis W4I3 | QF045_RS04425 | | sigma-54 dependent transcriptional regulator | cofit | 36 | 26 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_173 | | Related to two-component system sensory/regulatory protein | strong | 36 | 26 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12885 | | two-component system response regulator | insig. | 31 | 26 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0064 | | histidine kinase (RefSeq) | sig. | 31 | 43 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_17800 | | C4-dicarboxylate ABC transporter | strong | 29 | 40 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 29 | 43 |
| | Pseudomonas protegens RBAN4 | FABNJH_10325 | rpoS | Regulator of RpoS | strong | 28 | 40 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0946 | | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 27 | 35 |
| | Cellulophaga baltica 18 | M666_RS19210 | | sigma-54 dependent transcriptional regulator | insig. | 26 | 49 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS09930 | | hybrid sensor histidine kinase/response regulator | cofit | 25 | 46 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_401 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 24 | 71 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2109 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 29 | 44 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5487 | | Nitrogen regulation protein NR(I) | strong | 29 | 40 |
| | Shewanella loihica PV-4 | Shew_1442 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 28 | 50 |
| | Azospirillum brasilense Sp245 | AZOBR_RS30385 | | Fis family transcriptional regulator | insig. | 27 | 41 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 35 | 26 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21825 | | regulator | no data | 32 | 37 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02322 | | Blue-light-activated protein | cofit | 31 | 33 |
| | Shewanella oneidensis MR-1 | SO3196 | | response regulator (NCBI ptt file) | strong | 30 | 41 |
| | Marinobacter adhaerens HP15 | HP15_725 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 28 | 42 |
| | Pseudomonas stutzeri RCH2 | Psest_4132 | | alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) | strong | 28 | 41 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25855 | | sigma-54 dependent transcriptional regulator | strong | 28 | 39 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS58285 | | sigma-54 dependent transcriptional regulator | strong | 28 | 39 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT2897 | | two-component system sensor histidine kinase/response regulator, hybrid ('one-component system') (NCBI ptt file) | insig. | 26 | 60 |
| | Shewanella amazonensis SB2B | Sama_3499 | | protein-glutamate methylesterase (RefSeq) | insig. | 32 | 45 |
| | Pseudomonas sp. SVBP6 | COO64_RS26185 | | sigma-54 dependent transcriptional regulator | insig. | 31 | 37 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_685 | | Nitrogen regulation protein NR(I) | no data | 29 | 41 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05136 | | response regulator receiver sensor signal transduction histidine kinase (EC 2.7.13.3) | insig. | 27 | 41 |
| | Pseudomonas sp. SVBP6 | COO64_RS00595 | | sigma-54 dependent transcriptional regulator | insig. | 26 | 43 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_4938 | | Helix-turn-helix, Fis-type | sig. | 31 | 32 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4938 | | Helix-turn-helix, Fis-type | insig. | 31 | 32 |
| | Azospirillum sp. SherDot2 | MPMX19_01443 | | Regulator of RpoS | insig. | 30 | 37 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_0137 | | nitrogen regulation protein NR(I) | strong | 29 | 39 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS08380 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 28 | 42 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS05860 | | response regulator | insig. | 26 | 40 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS11185 | | response regulator | insig. | 26 | 40 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1078 | | Response regulator receiver domain | insig. | 36 | 24 |