| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_15280 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| o | Shewanella amazonensis SB2B | Sama_3308 | | AraC-type DNA-binding domain-containing protein (RefSeq) | insig. | 65 | 99 |
| o | Shewanella oneidensis MR-1 | SO3488 | | transcriptional regulator, AraC/XylS family (NCBI ptt file) | insig. | 49 | 99 |
| o | Shewanella loihica PV-4 | Shew_3550 | | AraC family transcriptional regulator (RefSeq) | insig. | 49 | 99 |
| o | Shewanella sp. ANA-3 | Shewana3_1081 | | AraC family transcriptional regulator (RefSeq) | insig. | 49 | 99 |
| o | Pseudomonas sp. SVBP6 | COO64_RS07905 | | helix-turn-helix domain-containing protein | insig. | 46 | 98 |
| o | Serratia liquefaciens MT49 | IAI46_02495 | | helix-turn-helix transcriptional regulator | insig. | 42 | 100 |
| o | Klebsiella michiganensis M5al | BWI76_RS17660 | | AraC/XylS familytranscription regulator | insig. | 41 | 97 |
| o | Pseudomonas aeruginosa MRSN321 | DY961_RS06905 | | helix-turn-helix transcriptional regulator | insig. | 34 | 93 |
| o | Pseudomonas aeruginosa PUPa3 | DQ20_RS45930 | | helix-turn-helix transcriptional regulator | insig. | 34 | 93 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_05105 | | AraC family transcriptional regulator | insig. | 34 | 93 |
| o | Dechlorosoma suillum PS | Dsui_2181 | | DNA-binding domain-containing protein, AraC-type | insig. | 35 | 86 |
| o | Variovorax sp. OAS795 | ABID97_RS11015 | | helix-turn-helix transcriptional regulator | insig. | 32 | 88 |
| | Variovorax sp. SCN45 | GFF2779 | | Transcriptional regulator, AraC family | insig. | 32 | 88 |
| o | Rhodospirillum rubrum S1H | Rru_A1951 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 29 | 96 |
| o | Pseudomonas simiae WCS417 | PS417_10365 | | AraC family transcriptional regulator | insig. | 35 | 86 |
| o | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS16095 | | helix-turn-helix transcriptional regulator | insig. | 31 | 86 |
| o | Paraburkholderia graminis OAS925 | ABIE53_002542 | | AraC-like DNA-binding protein/quercetin dioxygenase-like cupin family protein | insig. | 29 | 99 |
| o | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF3946 | | Transcriptional regulator, AraC family | insig. | 33 | 84 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02878 | | HTH-type transcriptional regulator NimR | cofit | 28 | 98 |
| o | Azospirillum brasilense Sp245 | AZOBR_RS28585 | | AraC family transcriptional regulator | insig. | 29 | 97 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS53755 | | helix-turn-helix transcriptional regulator | insig. | 34 | 88 |
| | Enterobacter sp. TBS_079 | MPMX20_01145 | | HTH-type transcriptional regulator NimR | insig. | 30 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03501 | | HTH-type transcriptional regulator NimR | cofit | 29 | 99 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_2415 | | AraC-type DNA-binding domain-containing proteins | insig. | 29 | 97 |
| o | Pseudomonas fluorescens FW300-N2C3 | AO356_29635 | | transcriptional regulator | insig. | 28 | 98 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS19645 | | helix-turn-helix transcriptional regulator | insig. | 34 | 88 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_07660 | | AraC family transcriptional regulator | insig. | 34 | 88 |
| o | Ralstonia solanacearum GMI1000 | RS_RS15385 | | AraC family transcriptional regulator | insig. | 30 | 86 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00574 | | transcriptional regulator, AraC family | insig. | 29 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS06235 | | helix-turn-helix transcriptional regulator | insig. | 30 | 86 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_27415 | | AraC family transcriptional regulator | insig. | 28 | 98 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS12320 | | AraC family transcriptional regulator | insig. | 30 | 86 |
| o | Ralstonia solanacearum PSI07 | RPSI07_RS09805 | | AraC family transcriptional regulator | insig. | 29 | 86 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS06270 | | helix-turn-helix transcriptional regulator | sig. | 27 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_05800 | | AraC family transcriptional regulator | insig. | 27 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS46525 | | helix-turn-helix transcriptional regulator | insig. | 27 | 95 |
| o | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS07445 | | AraC family transcriptional regulator | insig. | 29 | 86 |
| o | Ralstonia solanacearum UW163 | UW163_RS06175 | | AraC family transcriptional regulator | insig. | 29 | 86 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_20260 | | AraC family transcriptional regulator | sig. | 31 | 88 |
| | Rhodopseudomonas palustris CGA009 | TX73_016840 | | helix-turn-helix transcriptional regulator | insig. | 29 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_04533 | | HTH-type transcriptional regulator NimR | insig. | 28 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS13225 | | helix-turn-helix transcriptional regulator | insig. | 31 | 88 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS48540 | | helix-turn-helix transcriptional regulator | insig. | 31 | 88 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_2138 | | transcriptional regulator, AraC family | insig. | 27 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS14790 | | helix-turn-helix transcriptional regulator | insig. | 31 | 95 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS21185 | | transcriptional regulator | insig. | 29 | 96 |
| | Variovorax sp. SCN45 | GFF334 | | Transcriptional regulator, AraC family | insig. | 27 | 90 |
| o | Ralstonia sp. UNC404CL21Col | ABZR87_RS03090 | | helix-turn-helix transcriptional regulator | insig. | 29 | 86 |
| | Rhodospirillum rubrum S1H | Rru_A1462 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 30 | 90 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 28 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17510 | | helix-turn-helix transcriptional regulator | insig. | 28 | 98 |
| | Rhodospirillum rubrum S1H | Rru_A0140 | | Transcriptional Regulator, AraC family (NCBI) | insig. | 29 | 86 |
| o | Acinetobacter baumannii LAC-4 | RR41_RS08745 | | helix-turn-helix transcriptional regulator | insig. | 28 | 93 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0808 | | transcriptional regulator, AraC family (RefSeq) | insig. | 30 | 85 |
| | Pseudomonas sp. SVBP6 | COO64_RS11260 | | helix-turn-helix domain-containing protein | insig. | 30 | 95 |
| | Azospirillum brasilense Sp245 | AZOBR_RS31815 | | AraC family transcriptional regulator | insig. | 30 | 91 |
| | Shewanella sp. ANA-3 | Shewana3_1923 | | AraC family transcriptional regulator (RefSeq) | insig. | 31 | 86 |
| | Klebsiella michiganensis M5al | BWI76_RS21700 | | AraC family transcriptional regulator | insig. | 29 | 85 |
| | Serratia liquefaciens MT49 | IAI46_02585 | | helix-turn-helix transcriptional regulator | insig. | 27 | 95 |
| | Pseudomonas sp. SVBP6 | COO64_RS18105 | | helix-turn-helix transcriptional regulator | insig. | 31 | 95 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_05765 | | AraC family transcriptional regulator | insig. | 30 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS12940 | | AraC family transcriptional regulator | insig. | 28 | 98 |
| | Variovorax sp. SCN45 | GFF4824 | | Transcriptional regulator, AraC family | insig. | 32 | 87 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS04895 | | AraC family transcriptional regulator | insig. | 30 | 93 |
| | Rhodopseudomonas palustris CGA009 | TX73_014025 | | helix-turn-helix transcriptional regulator | insig. | 28 | 96 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07475 | | helix-turn-helix transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas sp. SVBP6 | COO64_RS07745 | | helix-turn-helix domain-containing protein | insig. | 32 | 94 |
| o | Pseudomonas orientalis W4I3 | QF045_RS24555 | | helix-turn-helix transcriptional regulator | strong | 31 | 89 |
| o | Cupriavidus basilensis FW507-4G11 | RR42_RS00395 | | AraC family transcriptional regulator | insig. | 31 | 94 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2459 | | Transcriptional regulator, AraC family | insig. | 32 | 87 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_22360 | | AraC family transcriptional regulator | insig. | 31 | 86 |
| | Pseudomonas simiae WCS417 | PS417_15525 | | AraC family transcriptional regulator | insig. | 29 | 96 |
| | Rhodospirillum rubrum S1H | Rru_A2335 | | Transcriptional Regulator, AraC family (NCBI) | cofit | 27 | 97 |
| | Enterobacter sp. TBS_079 | MPMX20_01835 | | HTH-type transcriptional regulator NimR | insig. | 28 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_06866 | | HTH-type transcriptional regulator NimR | insig. | 26 | 97 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_05000 | | AraC family transcriptional regulator | insig. | 31 | 89 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3528.1 | | hypothetical protein | insig. | 28 | 87 |
| o | Dickeya dadantii 3937 | DDA3937_RS02900 | | helix-turn-helix transcriptional regulator | insig. | 31 | 93 |
| | Dickeya dadantii 3937 | DDA3937_RS08325 | | helix-turn-helix transcriptional regulator | insig. | 30 | 85 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_00070 | | AraC family transcriptional regulator | insig. | 31 | 86 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_4934 | | Transcriptional regulator, AraC family | insig. | 29 | 86 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01943 | | HTH-type transcriptional regulator NimR | insig. | 29 | 95 |
| | Variovorax sp. SCN45 | GFF1485 | | Transcriptional regulator, AraC family | insig. | 29 | 87 |
| | Rhodopseudomonas palustris CGA009 | TX73_024245 | | helix-turn-helix transcriptional regulator | insig. | 30 | 91 |
| | Escherichia fergusonii Becca | EFB2_02205 | | HTH-type transcriptional regulator NimR | insig. | 29 | 95 |
| | Escherichia coli ECOR27 | NOLOHH_17210 | nimR | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS09975 | | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_2771 | | AraC-type DNA-binding domain-containing proteins | insig. | 30 | 86 |
| | Escherichia coli ECRC62 | BNILDI_15995 | nimR | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00689 | | transcriptional regulator, AraC family | no data | 30 | 85 |
| | Escherichia coli BL21 | ECD_01759 | | putative DNA-binding transcriptional regulator | no data | 29 | 95 |
| | Escherichia coli BW25113 | b1790 | yeaM | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 29 | 95 |
| | Escherichia coli ECOR38 | HEPCGN_05070 | nimR | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS05880 | | AraC-type DNA-binding domain-containing protein | sig. | 31 | 95 |
| | Pseudomonas sp. DMC3 | GFF1786 | | HTH-type transcriptional regulator NimR | insig. | 30 | 93 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03519 | | HTH-type transcriptional regulator NimR | cofit | 29 | 93 |
| | Enterobacter sp. TBS_079 | MPMX20_03566 | | HTH-type transcriptional regulator NimR | insig. | 31 | 86 |
| | Escherichia coli ECRC100 | OKFHMN_26680 | nimR | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |
| | Escherichia coli ECRC101 | MCAODC_18730 | nimR | DNA-binding transcriptional regulator NimR | insig. | 29 | 95 |