Homologs of CSW01_09900 from Vibrio cholerae E7946 ATCC 55056

ribonuclease D
SEED: Ribonuclease D (EC 3.1.26.3)
KEGG: ribonuclease D

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_09900 ribonuclease D insig. 100 100
o Serratia liquefaciens MT49 IAI46_14530 ribonuclease D cofit 50 97
o Dickeya dadantii 3937 DDA3937_RS11220 ribonuclease D insig. 51 97
o Enterobacter asburiae PDN3 EX28DRAFT_0755 ribonuclease D strong 49 97
o Pectobacterium carotovorum WPP14 HER17_RS11270 ribonuclease D strong 51 97
o Dickeya dianthicola 67-19 HGI48_RS11255 ribonuclease D cofit 49 98
o Enterobacter sp. TBS_079 MPMX20_02710 Ribonuclease D strong 48 99
o Rahnella sp. WP5 EX31_RS10595 ribonuclease D insig. 49 97
o Dickeya dianthicola ME23 DZA65_RS11600 ribonuclease D sig. 49 97
o Escherichia coli BW25113 b1804 rnd ribonuclease D (NCBI) strong 47 97
o Escherichia coli BL21 ECD_01774 ribonuclease D cofit 47 97
o Klebsiella michiganensis M5al BWI76_RS17795 ribonuclease D sig. 47 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2819 Ribonuclease D (EC 3.1.26.3) strong 48 94
o Escherichia coli ECOR38 HEPCGN_04995 rnd ribonuclease D sig. 47 96
o Escherichia fergusonii Becca EFB2_02196 Ribonuclease D insig. 47 96
o Escherichia coli Nissle 1917 ECOLIN_RS10035 ribonuclease D no data 47 96
o Erwinia amylovora T8 OLJFJH_13105 ribonuclease D insig. 48 94
o Escherichia coli ECOR27 NOLOHH_17125 rnd ribonuclease D insig. 47 96
o Escherichia coli ECRC100 OKFHMN_26605 rnd ribonuclease D cofit 47 96
o Escherichia coli ECRC101 MCAODC_18805 rnd ribonuclease D sig. 47 96
o Escherichia coli ECRC102 NIAGMN_01460 rnd ribonuclease D insig. 47 96
o Escherichia coli ECRC62 BNILDI_15910 rnd ribonuclease D cofit 47 96
o Escherichia coli ECRC98 JDDGAC_01180 rnd ribonuclease D insig. 47 96
o Escherichia coli ECRC99 KEDOAH_01505 rnd ribonuclease D no data 47 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01929 Ribonuclease D insig. 47 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS02675 ribonuclease D cofit 48 95
o Pantoea sp. MT58 IAI47_08840 ribonuclease D sig. 48 95
o Klebsiella pneumoniae MKP103 KDGMDA_25110 ribonuclease D insig. 47 91
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_22465 rnd ribonuclease D cofit 46 95
o Erwinia tracheiphila SCR3 LU632_RS13130 rnd ribonuclease D sig. 46 95
o Alteromonas macleodii MIT1002 MIT1002_02587 Ribonuclease D insig. 41 97
o Shewanella loihica PV-4 Shew_2187 ribonuclease D (RefSeq) insig. 42 94
o Shewanella amazonensis SB2B Sama_1933 ribonuclease D (RefSeq) strong 41 92
o Shewanella oneidensis MR-1 SO2580 rnd ribonuclease D (NCBI ptt file) sig. 38 97
o Shewanella sp. ANA-3 Shewana3_2385 ribonuclease D (RefSeq) insig. 37 98
o Pseudomonas putida KT2440 PP_4591 Ribonuclease D sig. 39 90
o Pseudomonas sp. S08-1 OH686_05315 ribonuclease D strong 35 97
o Pseudomonas sp. BP01 JOY50_RS01555 rnd ribonuclease D insig. 38 90
o Pseudomonas sp. RS175 PFR28_00712 Ribonuclease D insig. 36 97
o Pseudomonas stutzeri RCH2 Psest_2995 ribonuclease D no data 35 97
o Pseudomonas sp. SVBP6 COO64_RS26150 rnd ribonuclease D insig. 36 97
o Pseudomonas fluorescens FW300-N2E3 AO353_17855 ribonuclease D strong 35 97
o Pseudomonas simiae WCS417 PS417_07375 ribonuclease D sig. 35 97
o Pseudomonas segetis P6 ACVTMO_RS09125 rnd ribonuclease D strong 36 97
o Pseudomonas fluorescens SBW25 PFLU_RS07465 ribonuclease D insig. 34 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07465 ribonuclease D strong 34 97
o Pseudomonas aeruginosa PA14 IKLFDK_06140 ribonuclease D insig. 36 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS52945 rnd;go_function=RNA ribonuclease D sig. 36 96
o Pseudomonas fluorescens FW300-N2C3 AO356_04420 ribonuclease D sig. 34 97
o Pseudomonas aeruginosa MRSN321 DY961_RS18805 rnd;go_function=RNA ribonuclease D sig. 36 96
o Kangiella aquimarina DSM 16071 B158DRAFT_1574 ribonuclease D insig. 32 96
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2727 Ribonuclease D (EC 3.1.26.3) sig. 34 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4496 Ribonuclease D (EC 3.1.26.3) insig. 34 97
o Pseudomonas sp. DMC3 GFF2311 Ribonuclease D cofit 34 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3345 Ribonuclease D (EC 3.1.26.3) sig. 34 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01609 Ribonuclease D cofit 34 97
o Pseudomonas orientalis W4I3 QF045_RS10030 ribonuclease D insig. 34 97
o Pseudomonas syringae pv. syringae B728a Psyr_1563 Ribonuclease D strong 34 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1563 Ribonuclease D insig. 34 97
o Marinobacter adhaerens HP15 HP15_1882 ribonuclease D insig. 34 89
o Azospirillum brasilense Sp245 AZOBR_RS16220 ribonuclease D insig. 32 97
o Azospirillum sp. SherDot2 MPMX19_00986 Ribonuclease D sig. 33 97
o Rhizobium sp. OAE497 ABIE40_RS06640 ribonuclease D no data 34 95
o Bosea sp. OAE506 ABIE41_RS16115 ribonuclease D no data 33 96
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08205 ribonuclease D no data 31 94
o Rhodospirillum rubrum S1H Rru_A2073 Ribonuclease D (NCBI) no data 34 95
o Magnetospirillum magneticum AMB-1 AMB_RS14275 ribonuclease D no data 37 68
o Agrobacterium fabrum C58 Atu1151 ribonuclease D no data 31 95
  Sphingobium sp. HT1-2 GFF3127 Ribonuclease D (EC 3.1.26.3) no data 35 68
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0222 ribonuclease D no data 33 76
o Caulobacter crescentus NA1000 CCNA_01776 ribonuclease D no data 31 95
o Caulobacter crescentus NA1000 Δfur CCNA_01776 ribonuclease D no data 31 95
o Sinorhizobium meliloti 1021 SMc00622 ribonuclease D protein strong 31 94
o Xanthobacter sp. DMC5 GFF3531 Ribonuclease D insig. 32 92
o Rhodopseudomonas palustris CGA009 TX73_015755 ribonuclease D strong 30 95
o Phaeobacter inhibens DSM 17395 PGA1_c13290 putative ribonuclease D no data 31 95
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS07350 ribonuclease D insig. 29 90
o Acinetobacter baumannii LAC-4 RR41_RS12665 HRDC domain-containing protein no data 28 96
o Acinetobacter radioresistens SK82 MPMX26_01642 Ribonuclease D strong 27 96
o Dinoroseobacter shibae DFL-12 Dshi_1887 ribonuclease D (RefSeq) strong 30 94
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS12770 ribonuclease D insig. 30 91
o Rhodanobacter denitrificans MT42 LRK55_RS15770 ribonuclease D cofit 30 95
o Rhodanobacter sp. FW510-T8 OKGIIK_08985 Ribonuclease D insig. 29 95
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS16010 ribonuclease D sig. 29 95
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2248.1 Ribonuclease D (EC 3.1.26.3) insig. 33 84
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_18455 ribonuclease D insig. 30 67
  Bosea sp. OAE506 ABIE41_RS00145 ribonuclease D no data 31 39
  Rhodospirillum rubrum S1H Rru_A0015 3'-5' exonuclease (NCBI) no data 32 37
  Xanthobacter sp. DMC5 GFF4471 Ribonuclease D no data 32 40
  Synechocystis sp000284455 PCC 6803 SGL_RS13240 ribonuclease D no data 31 47
  Rhizobium sp. OAE497 ABIE40_RS00155 ribonuclease D strong 29 43
  Agrobacterium fabrum C58 Atu4108 ribonuclease D strong 29 41
  Rhodopseudomonas palustris CGA009 TX73_000240 ribonuclease D no data 30 37
  Dinoroseobacter shibae DFL-12 Dshi_3589 3'-5' exonuclease (RefSeq) no data 31 40
  Synechococcus elongatus PCC 7942 Synpcc7942_0678 rnd 3'-5' exonuclease strong 27 48
  Phaeobacter inhibens DSM 17395 PGA1_c36020 putative 3'-5'-exonuclease insig. 30 36
  Sinorhizobium meliloti 1021 SMc00342 hypothetical protein no data 27 50
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2539 3'-5' exonuclease no data 31 39
  Bifidobacterium breve UCC2003 BBR_RS14490 ribonuclease D strong 27 63
  Azospirillum brasilense Sp245 AZOBR_RS18845 3'-5' exonuclease no data 30 39