Homologs of CSW01_04610 from Vibrio cholerae E7946 ATCC 55056

GGDEF domain-containing protein
SEED: GGDEF domain family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_04610 GGDEF domain-containing protein insig. 100 100
o Shewanella amazonensis SB2B Sama_2418 GGDEF domain-containing protein (RefSeq) strong 31 95
o Shewanella oneidensis MR-1 SO1551 GGDEF domain protein (NCBI ptt file) strong 29 95
o Shewanella loihica PV-4 Shew_2754 diguanylate cyclase (RefSeq) strong 30 91
o Shewanella sp. ANA-3 Shewana3_2884 diguanylate cyclase (RefSeq) sig. 29 96
  Alteromonas macleodii MIT1002 MIT1002_00987 Stalked cell differentiation-controlling protein insig. 31 64
  Marinobacter adhaerens HP15 HP15_251 diguanylate cyclase cofit 35 47
  Pseudomonas fluorescens GW456-L13 PfGW456L13_588 GGDEF domain protein insig. 32 60
  Pseudomonas stutzeri RCH2 Psest_0188 diguanylate cyclase (GGDEF) domain insig. 30 64
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 31 57
  Pseudomonas orientalis W4I3 QF045_RS03380 diguanylate cyclase insig. 32 60
  Pseudomonas sp. S08-1 OH686_12185 GGDEF domain protein cofit 32 59
  Pseudomonas fluorescens FW300-N2E3 AO353_10960 hypothetical protein insig. 32 60
  Pseudomonas sp. DMC3 GFF625 hypothetical protein cofit 30 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1881 GGDEF domain protein insig. 30 60
  Pseudomonas segetis P6 ACVTMO_RS01545 diguanylate cyclase insig. 32 58
  Pseudomonas syringae pv. syringae B728a Psyr_0266 GGDEF domain protein insig. 31 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0266 GGDEF domain protein insig. 31 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4156 GGDEF domain protein insig. 32 57
  Pseudomonas fluorescens SBW25 PFLU_RS00425 diguanylate cyclase cofit 32 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00425 diguanylate cyclase sig. 32 60
  Pseudomonas fluorescens FW300-N2C3 AO356_11435 hypothetical protein insig. 32 57
  Pseudomonas sp. SVBP6 COO64_RS02505 diguanylate cyclase cofit 31 60
  Pseudomonas aeruginosa MRSN321 DY961_RS25735 dgcP;inference=COORDINATES diguanylate cyclase DgcP insig. 32 60
  Pseudomonas aeruginosa PA14 IKLFDK_25980 Diguanylate cyclase DgcP insig. 32 60
  Pseudomonas aeruginosa PUPa3 DQ20_RS58165 dgcP;inference=COORDINATES diguanylate cyclase DgcP sig. 32 60
  Pseudomonas sp. BP01 JOY50_RS21080 GGDEF domain-containing protein insig. 32 60
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00290 hypothetical protein insig. 31 63
  Pseudomonas putida KT2440 PP_0129 GGDEF domain protein sig. 30 60
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 31 60
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 36 38
  Azospirillum sp. SherDot2 MPMX19_01264 hypothetical protein insig. 36 32
  Ralstonia sp. UNC404CL21Col ABZR87_RS16760 GGDEF domain-containing protein insig. 36 32
  Rhodopseudomonas palustris CGA009 TX73_009350 GGDEF domain-containing protein insig. 40 29
  Bosea sp. OAE506 ABIE41_RS02130 GGDEF domain-containing protein insig. 39 31
  Marinobacter adhaerens HP15 HP15_3345 GGDEF domain protein insig. 36 29
  Pseudomonas stutzeri RCH2 Psest_3437 diguanylate cyclase (GGDEF) domain insig. 32 37
  Herbaspirillum seropedicae SmR1 HSERO_RS13895 diguanylate cyclase insig. 35 30
  Burkholderia phytofirmans PsJN BPHYT_RS34775 diguanylate cyclase insig. 31 37
  Dechlorosoma suillum PS Dsui_1430 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 30 41
  Acidovorax sp. GW101-3H11 Ac3H11_4322 Bll3041 protein insig. 35 34
  Paraburkholderia graminis OAS925 ABIE53_004649 diguanylate cyclase (GGDEF)-like protein strong 33 35
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 36 30
  Desulfovibrio vulgaris Miyazaki F DvMF_1477 diguanylate cyclase with PAS/PAC sensor (RefSeq) sig. 36 29
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 35 29
  Burkholderia phytofirmans PsJN BPHYT_RS01980 diguanylate cyclase insig. 34 40
  Marinobacter adhaerens HP15 HP15_p187g173 protein containing diguanylate cyclase, predicted domains insig. 31 39
  Azospirillum sp. SherDot2 MPMX19_01436 hypothetical protein insig. 35 37
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03607 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 30 42
  Magnetospirillum magneticum AMB-1 AMB_RS03740 signal transduction protein insig. 34 33
  Azospirillum sp. SherDot2 MPMX19_04876 hypothetical protein insig. 34 29
  Methylophilus sp. DMC18 GFF1240 hypothetical protein insig. 34 30
  Shewanella sp. ANA-3 Shewana3_4330 diguanylate cyclase with GAF sensor (RefSeq) insig. 38 24
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08350 PleD family two-component system response regulator insig. 33 33
  Escherichia coli BW25113 b1522 yneF predicted diguanylate cyclase (NCBI) insig. 43 24
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 36 30
  Escherichia coli BL21 ECD_01479 putative membrane-bound diguanylate cyclase insig. 43 24
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02197 hypothetical protein insig. 43 24
  Kangiella aquimarina DSM 16071 B158DRAFT_0477 diguanylate cyclase (GGDEF) domain insig. 38 30
  Azospirillum brasilense Sp245 AZOBR_RS10245 diguanylate cyclase sig. 36 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 38 23
  Paraburkholderia graminis OAS925 ABIE53_000542 diguanylate cyclase (GGDEF)-like protein insig. 32 40
  Escherichia coli ECOR27 NOLOHH_18775 gGDEF diguanylate cyclase insig. 42 25
  Escherichia coli ECRC100 OKFHMN_01125 gGDEF diguanylate cyclase insig. 42 25
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3556.1 FIG01213161: hypothetical protein insig. 32 37
  Escherichia coli ECRC62 BNILDI_17255 gGDEF diguanylate cyclase cofit 42 25
  Escherichia coli ECRC101 MCAODC_16800 gGDEF diguanylate cyclase sig. 42 25
  Escherichia coli ECRC102 NIAGMN_25270 gGDEF diguanylate cyclase cofit 42 25
  Escherichia coli ECRC98 JDDGAC_03635 gGDEF diguanylate cyclase sig. 42 25
  Escherichia coli ECRC99 KEDOAH_27305 gGDEF diguanylate cyclase no data 42 25
  Dechlorosoma suillum PS Dsui_1789 diguanylate cyclase (GGDEF) domain-containing protein insig. 35 30
  Azospirillum brasilense Sp245 AZOBR_RS03050 diguanylate cyclase sig. 35 29
  Pseudomonas aeruginosa MRSN321 DY961_RS21660 sensor domain-containing diguanylate cyclase insig. 34 33
  Pseudomonas aeruginosa PUPa3 DQ20_RS37635 sensor domain-containing diguanylate cyclase sig. 34 33
  Azospirillum sp. SherDot2 MPMX19_02206 hypothetical protein insig. 28 51
  Rhodopseudomonas palustris CGA009 TX73_008830 diguanylate cyclase insig. 27 48
  Paraburkholderia sabiae LMG 24235 QEN71_RS32265 diguanylate cyclase insig. 36 24
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02129 diguanylate cyclase (GGDEF) domain-containing protein insig. 32 41
  Kangiella aquimarina DSM 16071 B158DRAFT_0723 diguanylate cyclase (GGDEF) domain insig. 31 35
  Escherichia coli Nissle 1917 ECOLIN_RS08695 diguanylate cyclase no data 41 25
  Ralstonia sp. UNC404CL21Col ABZR87_RS23605 sensor domain-containing diguanylate cyclase no data 35 30
  Escherichia fergusonii Becca EFB2_02438 hypothetical protein insig. 41 25
  Escherichia coli ECOR38 HEPCGN_26635 gGDEF diguanylate cyclase insig. 41 25
  Desulfovibrio vulgaris Hildenborough JW710 DVU0416 GGDEF domain protein (TIGR) insig. 37 24
  Pseudomonas aeruginosa PA14 IKLFDK_23745 histidine kinase insig. 33 36
  Pseudomonas sp. S08-1 OH686_17790 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 30 34
  Pseudomonas segetis P6 ACVTMO_RS02560 siaD biofilm regulation diguanylate cyclase SiaD strong 29 37
  Herbaspirillum seropedicae SmR1 HSERO_RS01405 diguanylate cyclase insig. 34 35
  Burkholderia phytofirmans PsJN BPHYT_RS05535 diguanylate cyclase strong 33 29
  Acidovorax sp. GW101-3H11 Ac3H11_1120 Diguanylate cyclase/phosphodiesterase domain 1 (GGDEF) insig. 33 39
  Pseudomonas aeruginosa PUPa3 DQ20_RS32375 diguanylate cyclase sig. 30 35
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS16460 GGDEF domain-containing protein insig. 36 29
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 35 31
  Pseudomonas aeruginosa MRSN321 DY961_RS03260 diguanylate cyclase strong 30 35
  Pseudomonas aeruginosa MRSN321 DY961_RS27130 siaD;inference=COORDINATES biofilm formation regulator diguanylate cyclase SiaD strong 30 37
  Pseudomonas aeruginosa PA14 IKLFDK_24700 biofilm formation regulator diguanylate cyclase SiaD insig. 30 37
  Pseudomonas aeruginosa PUPa3 DQ20_RS31660 siaD;inference=COORDINATES biofilm formation regulator diguanylate cyclase SiaD strong 30 37
  Marinobacter adhaerens HP15 HP15_3711 sensory box/GGDEF/GAF/EAL domain protein insig. 38 30
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 35 24
  Shewanella amazonensis SB2B Sama_2970 diguanylate cyclase (RefSeq) insig. 35 34