Homologs of CA265_RS15335 from Pedobacter sp. GW460-11-11-14-LB5

NAD-dependent epimerase
SEED: UDP-glucose 4-epimerase related protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS15335 NAD-dependent epimerase strong 100 100
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS22275 NAD-dependent epimerase/dehydratase family protein insig. 70 100
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15945 NAD-dependent epimerase strong 60 99
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0146 Nucleoside-diphosphate-sugar epimerases insig. 54 99
o Ralstonia sp. UNC404CL21Col ABZR87_RS22680 NAD-dependent epimerase/dehydratase family protein insig. 55 98
o Variovorax sp. OAS795 ABID97_RS25775 NAD-dependent epimerase/dehydratase family protein insig. 55 98
o Cupriavidus basilensis FW507-4G11 RR42_RS28300 L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data) strong 54 98
o Ralstonia solanacearum GMI1000 RS_RS21745 L-threonine 3-dehydrogenase insig. 53 99
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS19400 L-threonine 3-dehydrogenase insig. 53 99
o Phocaeicola dorei CL03T12C01 ABI39_RS06655 NAD-dependent epimerase/dehydratase family protein insig. 45 99
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS10460 NAD-dependent epimerase/dehydratase family protein strong 45 99
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS09500 NAD-dependent epimerase/dehydratase family protein cofit 45 99
o Bacteroides stercoris CC31F HMPREF1181_RS10945 NAD-dependent epimerase/dehydratase family protein sig. 44 99
o Bacteroides thetaiotaomicron VPI-5482 BT1370 NAD dependent nucleotide-diphosphate-sugar epimerase (NCBI ptt file) sig. 42 99
o Bacteroides ovatus ATCC 8483 BACOVA_00210 NAD dependent epimerase/dehydratase family protein insig. 42 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS05235 D-erythronate dehydrogenase insig. 27 81
  Castellaniella sp019104865 MT123 ABCV34_RS10980 NAD(P)-dependent oxidoreductase insig. 26 95
  Herbaspirillum seropedicae SmR1 HSERO_RS05070 UDP-glucose 4-epimerase insig. 28 62
  Marinobacter adhaerens HP15 HP15_2023 UDP-glucuronic acid epimerase no data 26 73
  Methanococcus maripaludis S2 MMP_RS05635 NAD-dependent epimerase/dehydratase family protein strong 26 95
  Lysobacter sp. OAE881 ABIE51_RS07830 NAD-dependent epimerase insig. 24 72
  Variovorax sp. OAS795 ABID97_RS13410 NAD-dependent epimerase/dehydratase family protein insig. 29 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_124 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) insig. 25 71
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3804 Nucleoside-diphosphate-sugar epimerases cofit 26 46
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07970 NAD-dependent epimerase insig. 26 57
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2555 GDP-L-fucose synthetase (EC 1.1.1.271) insig. 23 95
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1561 hypothetical protein insig. 28 48
  Rhodanobacter denitrificans MT42 LRK55_RS17605 NAD-dependent epimerase cofit 23 72
  Bacteroides thetaiotaomicron VPI-5482 BT0600 nucleotide sugar epimerase (NCBI ptt file) sig. 23 96
  Azospirillum sp. SherDot2 MPMX19_06659 GDP-L-fucose synthase insig. 26 52
  Rhodanobacter denitrificans MT42 LRK55_RS02985 NAD-dependent epimerase no data 26 73
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS03235 NAD-dependent epimerase no data 26 73
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4890.1 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) strong 25 65
  Cupriavidus basilensis FW507-4G11 RR42_RS10985 NAD-dependent epimerase insig. 25 60
  Agrobacterium fabrum C58 Atu4166 UDP-glucose 4-epimerase strong 28 54
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS17380 NAD-dependent epimerase insig. 23 72
  Alteromonas macleodii MIT1002 MIT1002_02835 dTDP-glucose 4,6-dehydratase 2 no data 24 95
  Pseudomonas stutzeri RCH2 Psest_1819 Nucleoside-diphosphate-sugar epimerases strong 23 96
  Rhodanobacter denitrificans MT42 LRK55_RS03670 GDP-mannose 4,6-dehydratase strong 27 73
  Pseudomonas sp. RS175 PFR28_02769 UDP-N-acetylglucosamine 4-epimerase insig. 24 82
  Herbaspirillum seropedicae SmR1 HSERO_RS15385 hypothetical protein insig. 24 79
  Dechlorosoma suillum PS Dsui_0086 nucleoside-diphosphate-sugar epimerase strong 24 96
  Fusobacterium nucleatum SB010 HUW76_00075 UDP-glucose 4-epimerase GalE strong 27 94
  Pseudomonas simiae WCS417 PS417_02315 NAD-dependent dehydratase no data 26 89
  Dechlorosoma suillum PS Dsui_0401 nucleoside-diphosphate-sugar epimerase insig. 25 78
  Pseudomonas fluorescens FW300-N2C3 AO356_01145 UDP-glucuronate 5-epimerase insig. 24 71
  Bacteroides thetaiotaomicron VPI-5482 BT0380 nucleotide sugar epimerase (NCBI ptt file) sig. 24 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF124 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) strong 27 58
  Pseudomonas fluorescens SBW25 PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein no data 25 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS02390 NAD-dependent epimerase/dehydratase family protein no data 25 89
  Rhodanobacter sp. FW510-T8 OKGIIK_10115 Capsular biosynthesis protein CpsI no data 25 73
  Methanococcus maripaludis JJ MMJJ_RS08715 NAD-dependent epimerase/dehydratase family protein strong 25 68
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS08900 NAD-dependent epimerase insig. 25 73
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS16185 NAD-dependent epimerase insig. 23 72
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1139 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) insig. 27 62
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS18505 NAD-dependent epimerase insig. 23 72
  Desulfovibrio vulgaris Miyazaki F DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) strong 22 96
  Enterobacter sp. TBS_079 MPMX20_03010 UDP-glucose 4-epimerase strong 25 72
  Pseudomonas fluorescens SBW25 PFLU_RS17885 GDP-L-fucose synthase insig. 23 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17885 GDP-L-fucose synthase sig. 23 94
  Herbaspirillum seropedicae SmR1 HSERO_RS20995 NAD dependent epimerase/dehydratase insig. 26 54
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) strong 25 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS17935 SDR family oxidoreductase insig. 23 71
  Paraburkholderia graminis OAS925 ABIE53_005176 nucleoside-diphosphate-sugar epimerase insig. 22 70
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01505 Nucleoside-diphosphate-sugar epimerase insig. 22 70
  Rhodospirillum rubrum S1H Rru_A3576 UDP-glucuronate 5'-epimerase (NCBI) no data 24 70
  Shewanella oneidensis MR-1 SO4686 NAD dependent epimerase/dehydratase family protein (NCBI ptt file) strong 26 72
  Lysobacter sp. OAE881 ABIE51_RS01720 NAD-dependent epimerase/dehydratase family protein sig. 22 82
  Pseudomonas fluorescens FW300-N2C3 AO356_26320 protein CapI insig. 25 76
  Phocaeicola dorei CL03T12C01 ABI39_RS14815 NAD-dependent epimerase insig. 25 72
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS18480 NAD-dependent epimerase insig. 25 72
  Dinoroseobacter shibae DFL-12 Dshi_3049 NAD-dependent epimerase/dehydratase (RefSeq) insig. 26 73
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5885 dTDP-glucose 4,6-dehydratase (EC 4.2.1.46) insig. 24 77
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09700 NAD-dependent epimerase insig. 23 72
  Pseudomonas fluorescens SBW25 PFLU_RS09625 NAD-dependent epimerase/dehydratase family protein insig. 25 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS09625 NAD-dependent epimerase/dehydratase family protein sig. 25 60
  Rahnella sp. WP5 EX31_RS10090 NAD-dependent epimerase strong 24 72
  Klebsiella michiganensis M5al BWI76_RS18995 NAD-dependent epimerase no data 24 77
  Bosea sp. OAE506 ABIE41_RS10525 NAD-dependent epimerase strong 24 58
  Dinoroseobacter shibae DFL-12 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) strong 21 99
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS12985 GDP-mannose 4,6-dehydratase cofit 28 48
  Burkholderia phytofirmans PsJN BPHYT_RS29390 hypothetical protein no data 22 87
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2328 Nucleoside-diphosphate-sugar epimerases strong 26 56
  Escherichia coli ECRC101 OKFHMN_24445 wcaG GDP-fucose synthetase insig. 24 96
  Escherichia coli ECRC101 MCAODC_20495 wcaG GDP-fucose synthetase no data 24 96
  Escherichia coli ECRC102 NIAGMN_22390 wcaG GDP-fucose synthetase no data 24 96
  Escherichia coli ECRC98 JDDGAC_28555 wcaG GDP-fucose synthetase no data 24 96
  Escherichia coli ECRC99 KEDOAH_03705 wcaG GDP-fucose synthetase no data 24 96
  Pseudomonas syringae pv. syringae B728a Psyr_5106 NAD-dependent epimerase/dehydratase insig. 23 73
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_5106 NAD-dependent epimerase/dehydratase insig. 23 73
  Castellaniella sp019104865 MT123 ABCV34_RS12930 GDP-L-fucose synthase no data 24 95
  Escherichia coli Nissle 1917 ECOLIN_RS12090 GDP-L-fucose synthase no data 24 96
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS03850 GDP-L-fucose synthase insig. 21 96
  Serratia liquefaciens MT49 IAI46_14235 NAD-dependent epimerase no data 25 71
  Pseudomonas fluorescens FW300-N2E3 AO353_06770 NAD-dependent dehydratase no data 24 53
  Variovorax sp. SCN45 GFF5458 D-erythronate dehydrogenase (NAD+) insig. 21 78
  Caulobacter crescentus NA1000 CCNA_00090 UDP-glucose 4-epimerase cofit 26 54
  Caulobacter crescentus NA1000 Δfur CCNA_00090 UDP-glucose 4-epimerase cofit 26 54
  Cupriavidus basilensis FW507-4G11 RR42_RS16435 hypothetical protein insig. 26 83
  Pseudomonas putida KT2440 PP_0501 NAD-dependent epimerase/dehydratase family protein no data 23 72