Homologs of CA264_07430 from Pontibacter actiniarum KMM 6156, DSM 19842

DNA repair nuclease with dnaQ and GIY-YIG domains (from data)
Original annotation: DNA polymerase III subunit epsilon
SEED: DNA polymerase III epsilon subunit (EC 2.7.7.7)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 100 100
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 42 100
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS07560 DNA polymerase III subunit epsilon insig. 44 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 41 100
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 35 89
o Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 33 89
o Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 35 88
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3320 GIY-YIG catalytic domain. insig. 39 54
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 34 61
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 34 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 32 61
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 53 33
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 28 78
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 40 33
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 42 34
  Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 38 34
  Synechococcus elongatus PCC 7942 Synpcc7942_0251 Exonuclease sig. 39 32
  Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 37 34
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 37 34
  Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 38 34
  Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 36 35
  Pseudomonas sp. S08-1 OH686_08770 DNA polymerase III alpha subunit insig. 41 32
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 38 34
  Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 38 34
  Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 38 34
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 37 32
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 37 34
  Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 38 34
  Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 38 34
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 38 34
  Acidovorax sp. GW101-3H11 Ac3H11_5015 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 40 30
  Dinoroseobacter shibae DFL-12 Dshi_3559 DNA polymerase III, epsilon subunit (RefSeq) cofit 37 34
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 35 33
  Paraburkholderia graminis OAS925 ABIE53_003223 DNA polymerase-3 subunit epsilon insig. 27 41
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 35 35
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 33 34
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 34 34
  Enterobacter asburiae PDN3 EX28DRAFT_1745 GIY-YIG catalytic domain insig. 29 51
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 34 33
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 35 34
  Pantoea sp. MT58 IAI47_11065 excinuclease Cho insig. 29 53
  Herbaspirillum seropedicae SmR1 HSERO_RS11365 nuclease insig. 25 54
  Serratia liquefaciens MT49 IAI46_09070 endonuclease insig. 30 47
  Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 34 34
  Klebsiella michiganensis M5al BWI76_RS11710 nucleotide excision repair endonuclease insig. 28 46
  Escherichia coli ECOR27 NOLOHH_17455 cho excinuclease Cho no data 28 47
  Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 33 34
  Escherichia coli ECRC62 BNILDI_16240 cho excinuclease Cho insig. 27 47
  Escherichia coli ECRC101 OKFHMN_26940 cho excinuclease Cho no data 27 47
  Escherichia coli ECRC101 MCAODC_18470 cho excinuclease Cho insig. 27 47
  Escherichia coli ECRC102 NIAGMN_01125 cho excinuclease Cho no data 27 47
  Escherichia coli ECRC98 JDDGAC_01515 cho excinuclease Cho no data 27 47
  Escherichia coli BL21 ECD_01710 endonuclease of nucleotide excision repair no data 27 47
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01991 Excinuclease cho insig. 27 47
  Escherichia coli BW25113 b1741 ydjQ endonuclease of nucleotide excision repair (NCBI) sig. 27 47
  Escherichia coli ECRC99 KEDOAH_01170 cho excinuclease Cho no data 27 47
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3498 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 25 46
  Bacteroides stercoris CC31F HMPREF1181_RS01015 3'-5' exonuclease insig. 33 34
  Variovorax sp. OAS795 ABID97_RS10635 excinuclease ABC subunit UvrC strong 29 43
  Dinoroseobacter shibae DFL-12 Dshi_3448 DNA polymerase III, epsilon subunit (RefSeq) strong 29 42
  Bacteroides stercoris CC31F HMPREF1181_RS02095 excinuclease ABC subunit UvrC insig. 31 38
  Escherichia coli Nissle 1917 ECOLIN_RS09710 excinuclease Cho cofit 27 47
  Escherichia fergusonii Becca EFB2_02252 Excinuclease cho insig. 26 47
  Pseudomonas syringae pv. syringae B728a Psyr_2896 Excinuclease ABC subunit C strong 30 38
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2896 Excinuclease ABC subunit C strong 30 38
  Rhodanobacter denitrificans MT42 LRK55_RS16505 DNA polymerase III subunit epsilon no data 33 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16780 DNA polymerase III subunit epsilon no data 33 32
  Rhodanobacter sp. FW510-T8 OKGIIK_07985 dnaQ DNA polymerase III subunit epsilon no data 33 32
  Escherichia coli ECOR38 HEPCGN_05305 cho excinuclease Cho cofit 26 47
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.2112.1 Excinuclease cho (excinuclease ABC alternative C subunit) insig. 24 56
  Phocaeicola dorei CL03T12C01 ABI39_RS05415 excinuclease ABC subunit UvrC insig. 32 38
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11525 excinuclease ABC subunit UvrC strong 32 38
  Rahnella sp. WP5 EX31_RS24150 excinuclease ABC subunit UvrC insig. 32 41
  Enterobacter sp. TBS_079 MPMX20_01873 Excinuclease cho insig. 28 51
  Variovorax sp. SCN45 GFF2859 Excinuclease ABC subunit C insig. 27 43
  Bacteroides ovatus ATCC 8483 BACOVA_01365 excinuclease ABC, C subunit insig. 30 40
  Bacteroides thetaiotaomicron VPI-5482 BT3266 excinuclease ABC subunit C (NCBI ptt file) strong 30 40
  Kangiella aquimarina DSM 16071 B158DRAFT_1064 DNA polymerase III, epsilon subunit, Proteobacterial strong 29 41
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 33 32
  Mycobacterium tuberculosis H37Rv Rv3711c Probable DNA polymerase III (epsilon subunit) DnaQ insig. 31 31
  Bosea sp. OAE506 ABIE41_RS16250 3'-5' exonuclease insig. 30 35
  Castellaniella sp019104865 MT123 ABCV34_RS06980 excinuclease ABC subunit UvrC insig. 27 39
  Dickeya dadantii 3937 DDA3937_RS13700 excinuclease ABC subunit UvrC insig. 32 38
  Dickeya dianthicola 67-19 HGI48_RS13795 excinuclease ABC subunit UvrC insig. 31 38
  Ralstonia sp. UNC404CL21Col ABZR87_RS10245 excinuclease ABC subunit UvrC cofit 27 42
  Dickeya dianthicola ME23 DZA65_RS14285 excinuclease ABC subunit UvrC insig. 31 38
  Azospirillum brasilense Sp245 AZOBR_RS08965 excinuclease ABC subunit C insig. 24 41
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 32 33
  Pantoea sp. MT58 IAI47_12465 excinuclease ABC subunit UvrC insig. 32 39
  Azospirillum sp. SherDot2 MPMX19_03492 3'-5' exonuclease DinG insig. 30 34
  Cupriavidus basilensis FW507-4G11 RR42_RS14000 excinuclease ABC subunit C strong 26 45
  Pseudomonas putida KT2440 PP_4141 DNA polymerase III subunit epsilon no data 34 32
  Agrobacterium fabrum C58 Atu0005 DNA polymerase III, epsilon chain no data 31 42
  Bosea sp. OAE506 ABIE41_RS04640 DNA polymerase III subunit epsilon insig. 32 34
  Marinobacter adhaerens HP15 HP15_1568 excinuclease ABC subunit C strong 28 41
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07270 DNA polymerase III subunit epsilon no data 33 30
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 33 32
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 33 32
  Marinobacter adhaerens HP15 HP15_1802 DNA polymerase 3, epsilon subunit no data 32 32
  Serratia liquefaciens MT49 IAI46_09210 excinuclease ABC subunit UvrC cofit 31 38