Homologs of CA264_02130 from Pontibacter actiniarum KMM 6156, DSM 19842

pseudouridine synthase
SEED: Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70)
KEGG: ribosomal large subunit pseudouridine synthase E

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02130 pseudouridine synthase sig. 100 100
  Pseudomonas sp. S08-1 OH686_08840 LSU rRNA pseudouridine(2457) synthase insig. 61 80
  Castellaniella sp019104865 MT123 ABCV34_RS13900 pseudouridine synthase insig. 63 79
o Shewanella amazonensis SB2B Sama_2060 pseudouridylate synthase (RefSeq) insig. 58 82
  Pseudomonas stutzeri RCH2 Psest_0568 pseudouridine synthase insig. 61 79
  Pseudomonas fluorescens SBW25 PFLU_RS26510 pseudouridine synthase insig. 61 79
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26510 pseudouridine synthase insig. 61 79
  Pseudomonas syringae pv. syringae B728a Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 60 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4336 ribosomal large subunit pseudouridine synthase E insig. 60 79
  Kangiella aquimarina DSM 16071 B158DRAFT_1837 ribosomal large subunit pseudouridine synthase E (EC 5.4.99.-) insig. 61 77
  Pseudomonas simiae WCS417 PS417_24580 pseudouridine synthase sig. 60 79
  Shewanella loihica PV-4 Shew_1562 pseudouridylate synthase (RefSeq) insig. 60 78
  Shewanella sp. ANA-3 Shewana3_1749 ribosomal large subunit pseudouridine synthase E (RefSeq) insig. 59 77
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2722 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 59 79
  Variovorax sp. SCN45 GFF6670 LSU rRNA pseudouridine(2457) synthase (EC 5.4.99.20) insig. 60 77
  Pseudomonas putida KT2440 PP_4778 23S rRNA pseudouridine 2457 synthase insig. 59 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5028 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 60 79
  Pseudomonas fluorescens FW300-N2E3 AO353_06330 pseudouridine synthase insig. 58 79
  Pseudomonas fluorescens FW300-N2C3 AO356_15455 pseudouridine synthase insig. 59 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_05785 23S rRNA pseudouridine synthase E insig. 57 79
  Pseudomonas sp. RS175 PFR28_03839 Ribosomal large subunit pseudouridine synthase E insig. 58 79
o Azospirillum brasilense Sp245 AZOBR_RS03795 Pseudouridine synthase insig. 52 90
  Dechlorosoma suillum PS Dsui_3293 pseudouridine synthase family protein insig. 56 79
  Rahnella sp. WP5 EX31_RS24585 23S rRNA pseudouridine(2457) synthase RluE insig. 55 79
  Serratia liquefaciens MT49 IAI46_10455 23S rRNA pseudouridine(2457) synthase RluE insig. 55 79
o Acidovorax sp. GW101-3H11 Ac3H11_10 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 53 86
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1389 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 57 79
  Magnetospirillum magneticum AMB-1 AMB_RS12420 pseudouridine synthase cofit 55 79
  Escherichia coli ECOR38 HEPCGN_24230 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 57 79
  Alteromonas macleodii MIT1002 MIT1002_01829 Ribosomal large subunit pseudouridine synthase E insig. 55 77
  Escherichia coli ECOR27 NOLOHH_20890 rluE 23S rRNA pseudouridine(2457) synthase RluE cofit 56 79
  Escherichia coli ECRC62 BNILDI_19055 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 56 79
  Escherichia coli BW25113 b1135 ymfC orf, hypothetical protein (VIMSS) sig. 56 79
o Synechococcus elongatus PCC 7942 Synpcc7942_1514 Pseudouridine synthase, Rsu sig. 53 83
  Escherichia coli ECRC101 OKFHMN_00755 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 56 79
  Escherichia coli ECRC101 MCAODC_22330 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 56 79
  Escherichia coli ECRC102 NIAGMN_24900 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 56 79
  Escherichia coli ECRC98 JDDGAC_06610 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 56 79
  Escherichia coli ECRC99 KEDOAH_24840 rluE 23S rRNA pseudouridine(2457) synthase RluE no data 56 79
  Azospirillum sp. SherDot2 MPMX19_00077 Ribosomal large subunit pseudouridine synthase E insig. 56 79
  Escherichia fergusonii Becca EFB2_02840 Ribosomal large subunit pseudouridine synthase E insig. 55 79
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02533 Ribosomal large subunit pseudouridine synthase E insig. 55 79
o Cupriavidus basilensis FW507-4G11 RR42_RS17140 pseudouridine synthase insig. 53 81
  Escherichia coli BL21 ECD_01133 23S rRNA pseudouridine(2457) synthase insig. 54 79
  Enterobacter sp. TBS_079 MPMX20_01819 Ribosomal large subunit pseudouridine synthase E insig. 53 79
  Lysobacter sp. OAE881 ABIE51_RS00615 pseudouridine synthase insig. 58 78
  Pectobacterium carotovorum WPP14 HER17_RS11615 23S rRNA pseudouridine(2457) synthase RluE insig. 52 79
  Erwinia tracheiphila SCR3 LU632_RS14565 rluE 23S rRNA pseudouridine(2457) synthase RluE insig. 55 80
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3421 Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) insig. 52 80
  Enterobacter asburiae PDN3 EX28DRAFT_1795 pseudouridine synthase insig. 53 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS13170 pseudouridine synthase insig. 55 77
o Herbaspirillum seropedicae SmR1 HSERO_RS07010 pseudouridine synthase insig. 49 82
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09950 pseudouridine synthase insig. 55 78
  Klebsiella michiganensis M5al BWI76_RS11325 23S rRNA pseudouridine synthase E no data 55 78
  Dickeya dadantii 3937 DDA3937_RS11475 23S rRNA pseudouridine(2457) synthase RluE insig. 52 78
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1070 pseudouridine synthase insig. 54 78
  Rhodanobacter denitrificans MT42 LRK55_RS09590 pseudouridine synthase insig. 55 78
o Rhodospirillum rubrum S1H Rru_A1939 Pseudouridine synthase, Rsu (NCBI) insig. 53 79
  Dickeya dianthicola ME23 DZA65_RS11855 23S rRNA pseudouridine(2457) synthase RluE insig. 51 79
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.351.1 tRNA pseudouridine synthase A (EC 4.2.1.70) insig. 55 77
  Acinetobacter radioresistens SK82 MPMX26_01011 hypothetical protein insig. 51 88
  Dickeya dianthicola 67-19 HGI48_RS11520 23S rRNA pseudouridine(2457) synthase RluE insig. 50 79
  Phaeobacter inhibens DSM 17395 PGA1_c16410 ribosomal large subunit pseudouridine synthase E insig. 52 79
  Pantoea sp. MT58 IAI47_11905 23S rRNA pseudouridine(2457) synthase RluE insig. 53 79
  Dinoroseobacter shibae DFL-12 Dshi_2908 pseudouridine synthase (RefSeq) insig. 52 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS02975 pseudouridine synthase insig. 50 79
o Burkholderia phytofirmans PsJN BPHYT_RS15735 pseudouridine synthase insig. 50 80
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1556 pseudouridine synthase insig. 46 95
  Paraburkholderia graminis OAS925 ABIE53_003318 23S rRNA pseudouridine2457 synthase insig. 50 79
  Rhodanobacter sp. FW510-T8 OKGIIK_16200 Pseudouridine synthase insig. 55 77
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04086 23S rRNA pseudouridine2457 synthase insig. 49 79
  Marinobacter adhaerens HP15 HP15_2084 RNA pseudouridylate synthase insig. 50 77
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 41 83
  Shewanella loihica PV-4 Shew_0814 pseudouridine synthase (RefSeq) insig. 44 78
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 38 82
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 41 82
  Desulfovibrio vulgaris Miyazaki F DvMF_0369 pseudouridine synthase (RefSeq) sig. 39 83
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 39 84
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 37 83
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 40 82
  Rhodanobacter denitrificans MT42 LRK55_RS00435 pseudouridine synthase insig. 38 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS00665 rRNA pseudouridine synthase insig. 38 83
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08260 pseudouridine synthase insig. 41 79
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4091.1 Pseudouridylate synthase insig. 40 81
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 39 82
  Variovorax sp. SCN45 GFF7619 LSU rRNA pseudouridine(2605) synthase (EC 5.4.99.22) no data 42 71
  Bifidobacterium breve UCC2003 BBR_RS15700 rRNA pseudouridine synthase no data 36 81
  Dinoroseobacter shibae DFL-12 Dshi_2790 RNA-binding S4 domain protein (RefSeq) insig. 38 76
  Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 39 81
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 38 82
  Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 39 81
  Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 39 81
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 37 83
  Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 38 86
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 38 82
  Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 37 81
  Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 37 81
  Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 37 81
  Escherichia coli ECRC101 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 37 81
  Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 37 81