Homologs of Atu1080 from Agrobacterium fabrum C58

alanine racemase
SEED: Alanine racemase (EC 5.1.1.1)
KEGG: alanine racemase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1080 alanine racemase sig. 100 100
o Rhizobium sp. OAE497 ABIE40_RS06295 alanine racemase insig. 69 99
o Sinorhizobium meliloti 1021 SMc00557 alanine racemase strong 62 96
  Rhodospirillum rubrum S1H Rru_A0409 Alanine racemase region (NCBI) no data 48 93
  Magnetospirillum magneticum AMB-1 AMB_RS10575 alanine racemase no data 45 93
  Agrobacterium fabrum C58 Atu3292 alanine racemase strong 43 93
o Rhodopseudomonas palustris CGA009 TX73_015960 alanine racemase no data 42 93
  Azospirillum sp. SherDot2 MPMX19_06140 Alanine racemase, biosynthetic no data 42 93
o Xanthobacter sp. DMC5 GFF1868 Alanine racemase, biosynthetic no data 45 86
  Azospirillum brasilense Sp245 AZOBR_RS08350 alanine racemase no data 42 95
o Bosea sp. OAE506 ABIE41_RS17795 alanine racemase strong 44 93
  Caulobacter crescentus NA1000 CCNA_01733 alanine racemase strong 44 93
  Caulobacter crescentus NA1000 Δfur CCNA_01733 alanine racemase insig. 44 93
o Phaeobacter inhibens DSM 17395 PGA1_c10880 alanine racemase, biosynthetic strong 41 93
  Herbaspirillum seropedicae SmR1 HSERO_RS19760 alanine racemase insig. 39 93
  Dinoroseobacter shibae DFL-12 Dshi_2378 alanine racemase (RefSeq) strong 41 93
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03755 alanine racemase no data 40 94
o Sphingobium sp. HT1-2 GFF140 Alanine racemase (EC 5.1.1.1) no data 40 94
o Pseudomonas stutzeri RCH2 Psest_0699 alanine racemase no data 35 94
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0986 alanine racemase no data 38 94
o Pseudomonas sp. S08-1 OH686_15945 alanine racemase insig. 37 94
o Pseudomonas aeruginosa PA14 IKLFDK_28900 alanine racemase insig. 35 94
  Marinobacter adhaerens HP15 HP15_630 alanine racemase no data 35 92
o Desulfovibrio vulgaris Hildenborough JW710 DVU0955 alr alanine racemase (TIGR) no data 35 93
o Desulfovibrio vulgaris Miyazaki F DvMF_1349 alanine racemase (RefSeq) strong 38 91
o Escherichia coli BL21 ECD_01165 alanine racemase, catabolic, PLP-binding no data 33 92
o Escherichia coli ECOR27 NOLOHH_20720 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli ECOR38 HEPCGN_24755 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli ECRC62 BNILDI_18885 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02499 Alanine racemase, catabolic insig. 33 92
o Escherichia coli BW25113 b1190 dadX alanine racemase (NCBI) strong 33 92
o Escherichia coli ECRC100 OKFHMN_28295 dadX catabolic alanine racemase DadX cofit 33 92
o Escherichia coli ECRC101 MCAODC_21875 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli ECRC102 NIAGMN_27925 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli ECRC98 JDDGAC_06215 dadX catabolic alanine racemase DadX insig. 33 92
o Escherichia coli ECRC99 KEDOAH_25310 dadX catabolic alanine racemase DadX no data 33 92
o Escherichia fergusonii Becca EFB2_02742 Alanine racemase, catabolic insig. 33 92
o Acinetobacter radioresistens SK82 MPMX26_01153 Alanine racemase no data 32 92
o Vibrio cholerae E7946 ATCC 55056 CSW01_01955 alanine racemase no data 33 92
  Serratia liquefaciens MT49 IAI46_22945 alanine racemase insig. 32 93
  Alteromonas macleodii MIT1002 MIT1002_00544 Alanine racemase no data 31 92
o Acinetobacter baumannii LAC-4 RR41_RS06750 alanine racemase insig. 31 92
  Pseudomonas fluorescens GW456-L13 PfGW456L13_814 Alanine racemase (EC 5.1.1.1) no data 33 92
  Pseudomonas fluorescens FW300-N2E3 AO353_09145 alanine racemase no data 33 94
o Escherichia coli Nissle 1917 ECOLIN_RS07190 catabolic alanine racemase DadX no data 33 92
  Pseudomonas aeruginosa PA14 IKLFDK_26940 alanine racemase insig. 33 94
  Klebsiella pneumoniae MKP103 KDGMDA_10375 alanine racemase insig. 32 93
  Kangiella aquimarina DSM 16071 B158DRAFT_2013 alanine racemase strong 30 93
  Pseudomonas sp. S08-1 OH686_13695 alanine racemase insig. 33 94
  Bacteroides stercoris CC31F HMPREF1181_RS08970 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase no data 31 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2803 Alanine racemase (EC 5.1.1.1) ## catabolic insig. 32 92
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS09565 alanine racemase no data 33 94
  Shewanella sp. ANA-3 Shewana3_0714 alr alanine racemase (RefSeq) no data 31 92
  Klebsiella michiganensis M5al BWI76_RS17730 alanine racemase no data 31 92
  Rahnella sp. WP5 EX31_RS11885 alanine racemase insig. 32 93
  Pseudomonas fluorescens FW300-N2C3 AO356_12630 alanine racemase no data 32 92
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2146 Alanine racemase (EC 5.1.1.1) no data 32 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_15355 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase sig. 31 93
  Shewanella oneidensis MR-1 SO3916 alr alanine racemase, biosynthetic (NCBI ptt file) no data 30 92
  Escherichia coli BL21 ECD_03925 alanine racemase, biosynthetic, PLP-binding insig. 31 93
  Escherichia fergusonii Becca EFB2_04547 Alanine racemase, biosynthetic strong 31 93
  Escherichia coli ECOR27 NOLOHH_05175 alr alanine racemase strong 31 93
  Escherichia coli ECOR38 HEPCGN_11540 alr alanine racemase insig. 31 93
  Escherichia coli ECRC100 OKFHMN_12925 alr alanine racemase cofit 31 93
  Escherichia coli ECRC101 MCAODC_03435 alr alanine racemase sig. 31 93
  Escherichia coli ECRC102 NIAGMN_10770 alr alanine racemase insig. 31 93
  Escherichia coli ECRC62 BNILDI_06350 alr alanine racemase insig. 31 93
  Escherichia coli ECRC98 JDDGAC_16560 alr alanine racemase insig. 31 93
  Escherichia coli ECRC99 KEDOAH_15225 alr alanine racemase no data 31 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03990 Alanine racemase, biosynthetic insig. 31 93
  Escherichia coli BW25113 b4053 alr alanine racemase (NCBI) strong 31 93
  Pseudomonas putida KT2440 PP_5269 alanine racemase, PLP-binding no data 32 94
  Pseudomonas sp. BP01 JOY50_RS09130 alr alanine racemase no data 33 94
  Escherichia coli Nissle 1917 ECOLIN_RS23405 alanine racemase insig. 32 92
  Shewanella amazonensis SB2B Sama_3057 alr alanine racemase (RefSeq) no data 30 90
  Pseudomonas sp. SVBP6 COO64_RS01385 alr alanine racemase no data 33 92
  Klebsiella michiganensis M5al BWI76_RS01920 alanine racemase sig. 31 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS00585 alanine racemase no data 32 94
  Pseudomonas sp. RS175 PFR28_04397 Alanine racemase no data 32 92
  Pseudomonas sp. DMC3 GFF388 Alanine racemase no data 32 94
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4393 Alanine racemase (EC 5.1.1.1) no data 31 94
  Pseudomonas syringae pv. syringae B728a Psyr_0237 alanine racemase no data 33 92
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0237 alanine racemase no data 33 92
  Klebsiella pneumoniae MKP103 KDGMDA_25045 catabolic alanine racemase DadX insig. 30 92
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_22540 dadX catabolic alanine racemase DadX no data 31 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05170 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase no data 31 93
  Bacteroides ovatus ATCC 8483 BACOVA_04892 alanine racemase no data 31 93
  Methylophilus sp. DMC18 GFF1045 Alanine racemase, catabolic no data 31 92
o Rhodanobacter denitrificans MT42 LRK55_RS00355 alanine racemase no data 32 94
  Enterobacter asburiae PDN3 EX28DRAFT_4259 alanine racemase insig. 31 93
  Lysobacter sp. OAE881 ABIE51_RS09255 alanine racemase no data 31 95
  Erwinia tracheiphila SCR3 LU632_RS13065 dadX catabolic alanine racemase DadX no data 31 93
o Rhodanobacter sp. FW510-T8 OKGIIK_06670 alr alanine racemase no data 32 94
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00589 alanine racemase no data 31 92
o Paraburkholderia graminis OAS925 ABIE53_002527 alanine racemase no data 31 92
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS13365 bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase no data 31 93
  Methanococcus maripaludis JJ MMJJ_RS06585 alanine racemase sig. 27 94
  Shewanella loihica PV-4 Shew_3277 alr alanine racemase (RefSeq) no data 31 90
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS00205 alanine racemase no data 31 92
o Ralstonia solanacearum UW163 UW163_RS13535 alanine racemase no data 31 92