Homologs of Shew_1871 from Shewanella loihica PV-4

DNA polymerase III, epsilon subunit (RefSeq)
SEED: DNA polymerase III alpha subunit (EC 2.7.7.7)
KEGG: DNA polymerase III subunit epsilon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1871 DNA polymerase III, epsilon subunit (RefSeq) no data 100 100
o Shewanella oneidensis MR-1 SO2245 dnaQ-1 DNA polymerase III, epsilon subunit (NCBI ptt file) sig. 56 98
o Shewanella sp. ANA-3 Shewana3_2251 DNA polymerase III, epsilon subunit (RefSeq) insig. 55 98
o Pseudomonas syringae pv. syringae B728a Psyr_4300 DNA polymerase III, epsilon subunit insig. 46 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4300 DNA polymerase III, epsilon subunit insig. 46 99
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2733 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 46 99
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2127 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 46 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5043 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 46 99
o Pseudomonas fluorescens FW300-N2C3 AO356_15515 DNA polymerase III subunit epsilon insig. 46 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1406 DNA polymerase III alpha subunit (EC 2.7.7.7) no data 46 98
o Pseudomonas fluorescens FW300-N2E3 AO353_06275 DNA polymerase III subunit epsilon insig. 45 99
o Pseudomonas sp. RS175 PFR28_03828 DNA polymerase III PolC-type no data 45 99
o Pseudomonas putida KT2440 PP_4768 Exonuclease insig. 48 98
o Pseudomonas sp. SVBP6 COO64_RS15410 PolC-type DNA polymerase III insig. 44 98
o Pseudomonas sp. DMC3 GFF3922 DNA polymerase III PolC-type cofit 45 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05052 '3'-5' exonuclease DinG' transl_table=11 cofit 45 99
o Acidovorax sp. GW101-3H11 Ac3H11_5015 DNA polymerase III alpha subunit (EC 2.7.7.7) insig. 50 94
o Pseudomonas simiae WCS417 PS417_24520 DNA polymerase III subunit epsilon sig. 44 99
o Pseudomonas fluorescens SBW25 PFLU_RS26455 3'-5' exonuclease insig. 43 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS26455 3'-5' exonuclease insig. 43 99
o Cupriavidus basilensis FW507-4G11 RR42_RS25820 DNA polymerase III subunit epsilon insig. 40 96
o Pseudomonas sp. BP01 JOY50_RS21815 PolC-type DNA polymerase III insig. 45 96
o Pseudomonas segetis P6 MPMX49_01097 3'-5' exonuclease DinG insig. 46 95
o Pseudomonas sp. S08-1 OH686_08770 DNA polymerase III alpha subunit insig. 46 83
o Bosea sp. OAE506 ABIE41_RS16250 3'-5' exonuclease insig. 40 90
  Fusobacterium nucleatum SB010 HUW76_02840 PolC-type DNA polymerase III no data 35 80
  Alteromonas macleodii MIT1002 MIT1002_03947 DNA polymerase III PolC-type insig. 38 76
  Methylophilus sp. DMC18 GFF1760 3'-5' exonuclease DinG insig. 35 88
  Azospirillum brasilense Sp245 AZOBR_RS14205 exonuclease strong 35 85
  Cupriavidus basilensis FW507-4G11 RR42_RS36200 ethanolamine utilization protein insig. 38 77
  Dechlorosoma suillum PS Dsui_0101 exonuclease, DNA polymerase III, epsilon subunit family cofit 33 93
  Mycobacterium tuberculosis H37Rv Rv2191 Conserved hypothetical protein insig. 38 78
  Marinobacter adhaerens HP15 HP15_3043 DNA polymerase III, epsilon subunit cofit 39 72
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS13890 exonuclease domain-containing protein insig. 38 76
  Ralstonia solanacearum PSI07 RPSI07_RS15070 DNA polymerase III subunit epsilon no data 37 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS02300 DNA polymerase III subunit epsilon no data 38 79
  Ralstonia solanacearum UW163 UW163_RS11425 DNA polymerase III subunit epsilon no data 38 79
  Burkholderia phytofirmans PsJN BPHYT_RS15265 DNA polymerase III subunit epsilon insig. 38 81
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_07430 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 35 78
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2564 DNA repair nuclease with dnaQ and GIY-YIG domains (from data) strong 33 78
  Ralstonia solanacearum GMI1000 RS_RS09455 DNA polymerase III subunit epsilon no data 37 79
  Marinobacter adhaerens HP15 HP15_1802 DNA polymerase 3, epsilon subunit no data 37 79
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03997 DNA polymerase-3 subunit epsilon insig. 37 82
  Dickeya dianthicola ME23 DZA65_RS17250 DNA polymerase III subunit epsilon no data 37 79
  Castellaniella sp019104865 MT123 ABCV34_RS10470 DNA polymerase III subunit epsilon no data 37 79
  Dickeya dianthicola 67-19 HGI48_RS16165 DNA polymerase III subunit epsilon no data 37 79
  Azospirillum sp. SherDot2 MPMX19_01859 3'-5' exonuclease DinG insig. 35 82
  Dickeya dadantii 3937 DDA3937_RS16045 DNA polymerase III subunit epsilon no data 37 79
  Pectobacterium carotovorum WPP14 HER17_RS05470 DNA polymerase III subunit epsilon no data 36 79
  Pseudomonas aeruginosa PA14 IKLFDK_08830 DNA polymerase III subunit epsilon no data 37 79
  Synechococcus elongatus PCC 7942 Synpcc7942_0251 Exonuclease sig. 37 74
  Dechlorosoma suillum PS Dsui_2481 DNA polymerase III, epsilon subunit no data 35 79
  Bosea sp. OAE506 ABIE41_RS04640 DNA polymerase III subunit epsilon insig. 38 78
  Alteromonas macleodii MIT1002 MIT1002_01691 DNA polymerase III subunit epsilon no data 35 79
  Magnetospirillum magneticum AMB-1 AMB_RS07795 DNA polymerase III subunit epsilon insig. 34 82
  Ralstonia sp. UNC404CL21Col ABZR87_RS14230 DNA polymerase III subunit epsilon no data 34 79
  Vibrio cholerae E7946 ATCC 55056 CSW01_11380 DNA polymerase III subunit epsilon no data 36 79
  Pseudomonas sp. S08-1 OH686_03565 DNA polymerase III, epsilon subunit no data 36 79
  Dinoroseobacter shibae DFL-12 Dshi_3448 DNA polymerase III, epsilon subunit (RefSeq) strong 37 78
  Pseudomonas stutzeri RCH2 Psest_2074 DNA polymerase III, epsilon subunit, Proteobacterial no data 36 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS13650 DNA polymerase III subunit epsilon no data 33 78
  Cellulophaga baltica 18 M666_RS17600 exonuclease domain-containing protein insig. 36 73
  Paraburkholderia sabiae LMG 24235 QEN71_RS03705 exonuclease domain-containing protein insig. 35 79
  Bifidobacterium breve UCC2003 BBR_RS13650 3'-5' exonuclease insig. 37 74
  Cupriavidus basilensis FW507-4G11 RR42_RS13585 DNA polymerase III subunit epsilon no data 37 79
  Rhodopseudomonas palustris CGA009 TX73_001565 DNA polymerase III subunit epsilon no data 37 78
  Dinoroseobacter shibae DFL-12 Dshi_3559 DNA polymerase III, epsilon subunit (RefSeq) cofit 34 78
  Serratia liquefaciens MT49 IAI46_04150 DNA polymerase III subunit epsilon no data 36 79
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12090 DNA polymerase III subunit epsilon no data 37 79
  Herbaspirillum seropedicae SmR1 HSERO_RS17105 DNA polymerase III subunit epsilon strong 34 79
  Kangiella aquimarina DSM 16071 B158DRAFT_1064 DNA polymerase III, epsilon subunit, Proteobacterial strong 34 79
  Rhodanobacter sp. FW510-T8 OKGIIK_07985 dnaQ DNA polymerase III subunit epsilon no data 36 79
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS09830 DNA polymerase III subunit epsilon no data 34 79
  Azospirillum brasilense Sp245 AZOBR_RS01775 DNA polymerase III subunit epsilon sig. 38 78
  Rhodanobacter denitrificans MT42 LRK55_RS16505 DNA polymerase III subunit epsilon no data 36 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS16780 DNA polymerase III subunit epsilon no data 36 79
  Shewanella amazonensis SB2B Sama_1880 DNA-directed DNA polymerase (RefSeq) no data 34 81
  Pantoea sp. MT58 IAI47_15325 DNA polymerase III subunit epsilon no data 34 79
  Lysobacter sp. OAE881 ABIE51_RS14095 DNA polymerase III subunit epsilon no data 36 79
  Xanthobacter sp. DMC5 GFF1991 3'-5' exonuclease DinG insig. 34 81
  Rahnella sp. WP5 EX31_RS21175 DNA polymerase III subunit epsilon no data 34 81
  Cellulophaga baltica 18 M666_RS00695 exonuclease domain-containing protein insig. 33 78
  Methylophilus sp. DMC18 GFF1320 DNA polymerase III subunit epsilon no data 34 79
  Pseudomonas sp. SVBP6 COO64_RS19265 dnaQ DNA polymerase III subunit epsilon no data 36 79
  Pseudomonas segetis P6 MPMX49_02803 DNA polymerase III subunit epsilon no data 34 81
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS07270 DNA polymerase III subunit epsilon no data 33 79
  Acidovorax sp. GW101-3H11 Ac3H11_4106 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 33 79
  Pseudomonas syringae pv. syringae B728a Psyr_1764 DNA polymerase III, epsilon subunit no data 34 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1764 DNA polymerase III, epsilon subunit no data 34 79
  Pseudomonas sp. DMC3 GFF1025 DNA polymerase III subunit epsilon no data 35 79
  Paraburkholderia sabiae LMG 24235 QEN71_RS04745 DNA polymerase III subunit epsilon no data 35 79
  Pseudomonas fluorescens FW300-N2C3 AO356_24495 DNA polymerase III subunit epsilon no data 35 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_590 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 35 79
  Shewanella sp. ANA-3 Shewana3_2365 DNA polymerase III, epsilon subunit (RefSeq) no data 34 79
  Pseudomonas sp. RS175 PFR28_01555 DNA polymerase III subunit epsilon no data 35 79
  Pseudomonas fluorescens FW300-N2E3 AO353_23555 DNA polymerase III subunit epsilon no data 34 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3337 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 34 79
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4599 DNA polymerase III epsilon subunit (EC 2.7.7.7) no data 34 79
  Paraburkholderia graminis OAS925 ABIE53_003010 DNA polymerase-3 subunit epsilon no data 34 79
  Burkholderia phytofirmans PsJN BPHYT_RS14225 DNA polymerase III subunit epsilon no data 33 79