Homologs of Shew_0916 from Shewanella loihica PV-4

pseudouridine synthase (RefSeq)
SEED: Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70)
KEGG: ribosomal small subunit pseudouridine synthase A

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0916 pseudouridine synthase (RefSeq) insig. 100 100
o Shewanella sp. ANA-3 Shewana3_3175 pseudouridine synthase, Rsu (RefSeq) insig. 60 100
o Shewanella amazonensis SB2B Sama_2785 pseudouridine synthase, Rsu (RefSeq) insig. 60 97
o Pseudomonas putida KT2440 PP_1409 ribosomal small subunit pseudouridine synthase A insig. 55 97
o Pseudomonas sp. S08-1 OH686_05950 SSU rRNA pseudouridine(516) synthase insig. 53 97
o Pseudomonas sp. BP01 JOY50_RS14575 pseudouridine synthase insig. 54 97
o Pseudomonas aeruginosa PA14 IKLFDK_03105 Ribosomal small subunit pseudouridine synthase A insig. 52 97
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4535 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 51 97
o Pseudomonas syringae pv. syringae B728a Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 53 96
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3981 ribosomal small subunit pseudouridine synthase A insig. 53 96
o Pseudomonas segetis P6 MPMX49_01369 Ribosomal small subunit pseudouridine synthase A insig. 52 97
o Pseudomonas fluorescens FW300-N2E3 AO353_17535 16S rRNA pseudouridine(516) synthase insig. 50 97
o Pseudomonas sp. DMC3 GFF2251 Ribosomal small subunit pseudouridine synthase A cofit 51 95
o Pseudomonas fluorescens SBW25 PFLU_RS07085 pseudouridine synthase insig. 51 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07085 pseudouridine synthase insig. 51 97
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3297 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 50 97
o Pseudomonas simiae WCS417 PS417_07010 pseudouridine synthase insig. 51 95
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2785 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 50 97
o Pseudomonas sp. RS175 PFR28_00665 Ribosomal small subunit pseudouridine synthase A insig. 49 97
o Pseudomonas stutzeri RCH2 Psest_3049 pseudouridine synthase insig. 52 97
o Pseudomonas fluorescens FW300-N2C3 AO356_04690 16S rRNA pseudouridine(516) synthase insig. 50 97
o Pseudomonas sp. SVBP6 COO64_RS16420 pseudouridine synthase insig. 51 97
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01553 Ribosomal small subunit pseudouridine synthase A cofit 49 97
o Marinobacter adhaerens HP15 HP15_2675 pseudouridine synthase, Rsu insig. 47 95
  Shewanella loihica PV-4 Shew_2975 pseudouridine synthase (RefSeq) insig. 45 97
  Serratia liquefaciens MT49 IAI46_17345 16S rRNA pseudouridine(516) synthase RsuA insig. 46 97
  Rahnella sp. WP5 EX31_RS19195 16S rRNA pseudouridine(516) synthase RsuA insig. 47 97
  Klebsiella pneumoniae MKP103 KDGMDA_26750 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Shewanella sp. ANA-3 Shewana3_0760 ribosomal small subunit pseudouridine synthase A (RefSeq) insig. 42 98
  Erwinia amylovora T8 OLJFJH_11710 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECOR38 HEPCGN_22625 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 45 97
  Pantoea sp. MT58 IAI47_06585 16S rRNA pseudouridine(516) synthase RsuA sig. 45 97
  Escherichia coli BL21 ECD_02113 16S rRNA pseudouridine(516) synthase insig. 44 97
  Escherichia fergusonii Becca EFB2_01673 Ribosomal small subunit pseudouridine synthase A insig. 44 97
  Escherichia coli ECOR27 NOLOHH_14935 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECRC100 OKFHMN_23360 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 44 97
  Escherichia coli ECRC101 MCAODC_14410 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECRC102 NIAGMN_21125 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECRC62 BNILDI_13855 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECRC98 JDDGAC_27320 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Escherichia coli ECRC99 KEDOAH_04825 rsuA 16S rRNA pseudouridine(516) synthase RsuA no data 44 97
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01526 Ribosomal small subunit pseudouridine synthase A insig. 44 97
  Escherichia coli Nissle 1917 ECOLIN_RS12760 16S rRNA pseudouridine(516) synthase RsuA no data 44 97
  Escherichia coli BW25113 b2183 rsuA 16S rRNA pseudouridylate 516 synthase (NCBI) strong 44 97
  Dickeya dadantii 3937 DDA3937_RS09160 16S rRNA pseudouridine(516) synthase RsuA insig. 45 97
  Enterobacter asburiae PDN3 EX28DRAFT_0378 pseudouridine synthase insig. 44 97
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3753 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 44 97
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS00670 16S rRNA pseudouridine(516) synthase RsuA cofit 44 97
  Klebsiella michiganensis M5al BWI76_RS19810 16S rRNA pseudouridine(516) synthase no data 44 97
  Enterobacter sp. TBS_079 MPMX20_03149 Ribosomal small subunit pseudouridine synthase A insig. 44 97
  Dickeya dianthicola ME23 DZA65_RS09500 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Dickeya dianthicola 67-19 HGI48_RS09200 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Pectobacterium carotovorum WPP14 HER17_RS12950 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_16035 rsuA 16S rRNA pseudouridine(516) synthase RsuA cofit 44 97
  Erwinia tracheiphila SCR3 LU632_RS17595 rsuA 16S rRNA pseudouridine(516) synthase RsuA insig. 44 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_08220 16S rRNA pseudouridine(516) synthase insig. 41 97
  Shewanella amazonensis SB2B Sama_2614 pseudouridine synthase, Rsu (RefSeq) insig. 40 97
  Caulobacter crescentus NA1000 CCNA_01915 ribosomal small subunit pseudouridine synthase A strong 40 97
  Caulobacter crescentus NA1000 Δfur CCNA_01915 ribosomal small subunit pseudouridine synthase A cofit 40 97
  Marinobacter adhaerens HP15 HP15_3359 pseudouridine synthase, Rsu insig. 41 97
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS00325 16S rRNA pseudouridine(516) synthase insig. 41 97
  Magnetospirillum magneticum AMB-1 AMB_RS12445 rRNA pseudouridine synthase insig. 39 97
  Ralstonia solanacearum PSI07 RPSI07_RS20655 16S rRNA pseudouridine(516) synthase insig. 36 99
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12605 16S rRNA pseudouridine(516) synthase insig. 37 99
  Ralstonia solanacearum UW163 UW163_RS00960 16S rRNA pseudouridine(516) synthase insig. 37 99
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4611.1 Ribosomal small subunit pseudouridine synthase A (EC 4.2.1.70) insig. 40 92
  Ralstonia solanacearum GMI1000 RS_RS03390 16S rRNA pseudouridine(516) synthase insig. 36 99
o Paraburkholderia sabiae LMG 24235 QEN71_RS03150 16S rRNA pseudouridine(516) synthase insig. 36 91
  Methylophilus sp. DMC18 GFF98 Ribosomal small subunit pseudouridine synthase A insig. 33 98
o Fusobacterium nucleatum SB010 HUW76_04445 rRNA pseudouridine synthase cofit 34 95
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15935 rRNA pseudouridine synthase strong 38 97
  Rhodanobacter denitrificans MT42 LRK55_RS15690 pseudouridine synthase cofit 38 97
  Lysobacter sp. OAE881 ABIE51_RS18480 pseudouridine synthase cofit 38 97
  Variovorax sp. SCN45 GFF3076 SSU rRNA pseudouridine(516) synthase (EC 5.4.99.19) insig. 35 91
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS12840 rRNA pseudouridine synthase insig. 38 97
  Cupriavidus basilensis FW507-4G11 RR42_RS15880 pseudouridine synthase insig. 36 96
  Ralstonia sp. UNC404CL21Col ABZR87_RS08605 pseudouridine synthase insig. 35 91
  Burkholderia phytofirmans PsJN BPHYT_RS15560 pseudouridine synthase insig. 34 91
  Variovorax sp. OAS795 ABID97_RS09900 16S rRNA pseudouridine(516) synthase insig. 33 91
  Rhodanobacter sp. FW510-T8 OKGIIK_09050 Pseudouridine synthase insig. 37 97
  Fusobacterium nucleatum SB010 HUW76_04625 rRNA pseudouridine synthase cofit 31 97
  Paraburkholderia graminis OAS925 ABIE53_003276 16S rRNA pseudouridine516 synthase insig. 34 90
  Synechococcus elongatus PCC 7942 Synpcc7942_1010 ribosomal large subunit pseudouridine synthase B strong 37 95
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08410 pseudouridine synthase insig. 36 96
  Dechlorosoma suillum PS Dsui_0824 pseudouridine synthase family protein insig. 32 91
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04053 ribosomal small subunit pseudouridine synthase A (EC 5.4.99.-) insig. 33 91
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS11350 pseudouridine synthase insig. 37 97
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_0719 pseudouridine synthase no data 30 97
  Acinetobacter baumannii LAC-4 RR41_RS07045 rRNA pseudouridine synthase sig. 34 89
  Synechocystis sp000284455 PCC 6803 SGL_RS12865 pseudouridine synthase strong 36 95
  Rhizobium sp. OAE497 ABIE40_RS15330 pseudouridine synthase cofit 34 97
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS07850 pseudouridine synthase insig. 31 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_11335 23S rRNA pseudouridine(2604) synthase RluF insig. 28 97
  Lysobacter sp. OAE881 ABIE51_RS12720 pseudouridine synthase insig. 30 98
  Shewanella loihica PV-4 Shew_2246 pseudouridine synthase (RefSeq) sig. 30 95
  Sinorhizobium meliloti 1021 SM_b20024 ribosomal large subunit pseudouridine synthase B insig. 32 98
  Mycobacterium tuberculosis H37Rv Rv1711 Conserved hypothetical protein no data 31 97
  Lysobacter sp. OAE881 ABIE51_RS06125 pseudouridine synthase insig. 31 99
  Rhodanobacter sp. FW510-T8 OKGIIK_06590 Pseudouridine synthase insig. 34 96
  Shewanella sp. ANA-3 Shewana3_0916 pseudouridine synthase, Rsu (RefSeq) insig. 33 97