Conservation of cofitness between Xcc-8004.608.1 and Xcc-8004.5020.1 in Xanthomonas campestris pv. campestris strain 8004

64 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.608.1 Anthranilate synthase, aminase component (EC 4.1.3.27) 1.0 Xcc-8004.5020.1 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.91 9
Lysobacter sp. OAE881 0.79 ABIE51_RS04150 anthranilate synthase component I 0.57 ABIE51_RS01815 shikimate dehydrogenase 0.81 59
Rhodanobacter denitrificans FW104-10B01 0.76 LRK54_RS11415 anthranilate synthase component I 0.49 LRK54_RS08595 shikimate dehydrogenase 0.79 2
Rhodanobacter denitrificans MT42 0.76 LRK55_RS11145 anthranilate synthase component I 0.49 LRK55_RS08360 shikimate dehydrogenase low > 63
Rhodanobacter sp. FW510-T8 0.74 OKGIIK_12405 trpE anthranilate synthase component I 0.46 OKGIIK_15365 aroE shikimate dehydrogenase low > 52
Dyella japonica UNC79MFTsu3.2 0.74 ABZR86_RS12180 anthranilate synthase component I 0.51 ABZR86_RS14985 shikimate dehydrogenase 0.97 1
Marinobacter adhaerens HP15 0.61 HP15_3288 anthranilate synthase component I 0.34 HP15_3750 shikimate dehydrogenase
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_4609 anthranilate synthase, component I 0.37 Psyr_0025 shikimate dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_4609 anthranilate synthase, component I 0.37 Psyr_0025 shikimate dehydrogenase 0.72 39
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4822 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.38 Pf6N2E2_4130 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25)
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_07230 anthranilate synthase 0.38 AO353_10670 shikimate dehydrogenase 0.73 45
Pseudomonas sp. RS175 0.59 PFR28_04047 Anthranilate synthase component 1 0.39 PFR28_04655 Shikimate dehydrogenase (NADP(+))
Pseudomonas stutzeri RCH2 0.59 Psest_3650 anthranilate synthase component I, non-proteobacterial lineages 0.35 Psest_0029 shikimate 5-dehydrogenase
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_14420 anthranilate synthase 0.38 AO356_11315 shikimate dehydrogenase 0.52 85
Pseudomonas simiae WCS417 0.59 PS417_25725 anthranilate synthase component I 0.39 PS417_00125 shikimate dehydrogenase
Pseudomonas fluorescens SBW25 0.59 PFLU_RS27380 anthranilate synthase component I 0.39 PFLU_RS00120 shikimate dehydrogenase
Pseudomonas sp. S08-1 0.59 OH686_15125 anthranilate synthase component I 0.37 OH686_12485 Shikimate 5-dehydrogenase I alpha 0.68 38
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS27380 anthranilate synthase component I 0.39 PFLU_RS00120 shikimate dehydrogenase
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_2545 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.38 Pf1N1B4_1906 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.52 72
Pseudomonas putida KT2440 0.58 PP_0417 Anthranilate synthase component 1 0.37 PP_0074 shikimate 5-dehydrogenase
Pseudomonas fluorescens GW456-L13 0.58 PfGW456L13_1217 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.38 PfGW456L13_644 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.73 55
Dechlorosoma suillum PS 0.55 Dsui_0219 anthranilate synthase component I 0.38 Dsui_0443 shikimate 5-dehydrogenase
Ralstonia solanacearum GMI1000 0.54 RS_RS14430 anthranilate synthase component I 0.35 RS_RS13890 shikimate dehydrogenase 0.50 65
Ralstonia solanacearum PSI07 0.54 RPSI07_RS10755 anthranilate synthase component I 0.36 RPSI07_RS11300 shikimate dehydrogenase
Ralstonia solanacearum UW163 0.54 UW163_RS07140 anthranilate synthase component I 0.36 UW163_RS07680 shikimate dehydrogenase
Ralstonia solanacearum IBSBF1503 0.54 RALBFv3_RS06485 anthranilate synthase component I 0.36 RALBFv3_RS05945 shikimate dehydrogenase low > 76
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS27550 anthranilate synthase component I 0.36 QEN71_RS27130 shikimate dehydrogenase 0.84 40
Ralstonia sp. UNC404CL21Col 0.53 ABZR87_RS02140 anthranilate synthase component I 0.36 ABZR87_RS01605 shikimate dehydrogenase 0.64 43
Cupriavidus basilensis FW507-4G11 0.53 RR42_RS18295 anthranilate synthase component I 0.30 RR42_RS17645 shikimate dehydrogenase 0.80 16
Acidovorax sp. GW101-3H11 0.52 Ac3H11_767 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.29 Ac3H11_4044 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.96 8
Paraburkholderia bryophila 376MFSha3.1 0.52 H281DRAFT_05715 anthranilate synthase, component I 0.36 H281DRAFT_06291 shikimate dehydrogenase (EC 1.1.1.25)
Paraburkholderia graminis OAS925 0.52 ABIE53_003640 anthranilate synthase component 1 0.35 ABIE53_003560 shikimate dehydrogenase
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS17390 anthranilate synthase subunit I 0.34 BPHYT_RS16975 shikimate 5-dehydrogenase 0.75 53
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS19435 anthranilate synthase subunit I 0.37 HSERO_RS01990 shikimate 5-dehydrogenase 0.80 26
Hydrogenophaga sp. GW460-11-11-14-LB1 0.51 GFF3106 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.34 GFF5226 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) 0.57 52
Castellaniella sp019104865 MT123 0.50 ABCV34_RS10280 anthranilate synthase component I 0.35 ABCV34_RS11620 shikimate dehydrogenase low > 48
Variovorax sp. OAS795 0.49 ABID97_RS05250 anthranilate synthase component I 0.25 ABID97_RS06300 shikimate dehydrogenase
Variovorax sp. SCN45 0.49 GFF5896 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.25 GFF4456 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 127
Acinetobacter radioresistens SK82 0.49 MPMX26_00199 Anthranilate synthase component 1 0.36 MPMX26_02748 Shikimate dehydrogenase (NADP(+)) low > 36
Azospirillum sp. SherDot2 0.43 MPMX19_00893 Anthranilate synthase component 1 0.22 MPMX19_02560 Shikimate dehydrogenase (NADP(+))
Azospirillum brasilense Sp245 0.43 AZOBR_RS07490 anthranilate synthase subunit I 0.17 AZOBR_RS01765 shikimate 5-dehydrogenase
Caulobacter crescentus NA1000 0.41 CCNA_01972 anthranilate synthase component I 0.19 CCNA_00003 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.93 8
Caulobacter crescentus NA1000 Δfur 0.41 CCNA_01972 anthranilate synthase component I 0.19 CCNA_00003 shikimate 5-dehydrogenase low > 67
Dinoroseobacter shibae DFL-12 0.40 Dshi_1796 anthranilate synthase component I (RefSeq) 0.24 Dshi_3450 shikimate 5-dehydrogenase (RefSeq)
Rhodospirillum rubrum S1H 0.40 Rru_A1891 Anthranilate synthase component I (NCBI) 0.22 Rru_A3613 Quinate/Shikimate 5-dehydrogenase (NCBI)
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_1003 trpE anthranilate synthase, component I 0.20 Synpcc7942_2467 aroE shikimate 5-dehydrogenase
Magnetospirillum magneticum AMB-1 0.40 AMB_RS09175 anthranilate synthase component I 0.19 AMB_RS23010 shikimate dehydrogenase
Brevundimonas sp. GW460-12-10-14-LB2 0.39 A4249_RS06155 anthranilate synthase component I 0.18 A4249_RS13660 shikimate dehydrogenase
Bosea sp. OAE506 0.39 ABIE41_RS15730 anthranilate synthase component I 0.24 ABIE41_RS04650 shikimate dehydrogenase
Phaeobacter inhibens DSM 17395 0.38 PGA1_c16860 anthranilate synthase component 1 0.26 PGA1_c35150 shikimate dehydrogenase AroE
Sphingomonas koreensis DSMZ 15582 0.37 Ga0059261_0256 anthranilate synthase component I, non-proteobacterial lineages 0.17 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) 0.94 44
Mycobacterium tuberculosis H37Rv 0.34 Rv1609 Anthranilate synthase component I TrpE (glutamine amidotransferase) 0.12 Rv2552c Probable shikimate 5-dehydrogenase AroE (5-dehydroshikimate reductase)
Desulfovibrio vulgaris Miyazaki F 0.30 DvMF_1746 Anthranilate synthase (RefSeq) 0.19 DvMF_1962 shikimate 5-dehydrogenase (RefSeq)
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU0465 trpE anthranilate synthase, component I (TIGR) 0.23 DVU0115 aroE shikimate 5-dehydrogenase (TIGR)
Erwinia tracheiphila SCR3 0.26 LU632_RS12755 anthranilate synthase component 1 0.34 LU632_RS22445 aroE shikimate dehydrogenase low > 74
Bacteroides ovatus ATCC 8483 0.26 BACOVA_03780 chorismate binding enzyme 0.12 BACOVA_05065 putative shikimate dehydrogenase
Methanococcus maripaludis S2 0.26 MMP_RS05205 anthranilate synthase component I 0.20 MMP_RS04855 shikimate dehydrogenase
Methanococcus maripaludis JJ 0.26 MMJJ_RS09175 anthranilate synthase component I 0.19 MMJJ_RS00280 shikimate dehydrogenase
Shewanella loihica PV-4 0.26 Shew_2251 anthranilate synthase component I (RefSeq) 0.38 Shew_3727 shikimate 5-dehydrogenase (RefSeq) low > 60
Fusobacterium nucleatum SB010 0.25 HUW76_10205 aminodeoxychorismate synthase component I 0.18 HUW76_10445 shikimate dehydrogenase low > 35
Enterobacter asburiae PDN3 0.25 EX28DRAFT_0747 aminodeoxychorismate synthase, component I, bacterial clade 0.35 EX28DRAFT_0046 shikimate dehydrogenase low > 76
Echinicola vietnamensis KMM 6221, DSM 17526 0.25 Echvi_2504 Anthranilate/para-aminobenzoate synthases component I 0.13 Echvi_1145 Shikimate 5-dehydrogenase
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.25 GFF2722 Anthranilate synthase, aminase component (EC 4.1.3.27) 0.35 GFF2397 Shikimate 5-dehydrogenase I alpha (EC 1.1.1.25) low > 78
Shewanella amazonensis SB2B 0.25 Sama_2129 anthranilate synthase component I (RefSeq) 0.36 Sama_0052 shikimate dehydrogenase (RefSeq) low > 62
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_1341 aminodeoxychorismate synthase, component I, bacterial clade 0.30 B158DRAFT_0259 shikimate 5-dehydrogenase low > 40

Not shown: 9 genomes with orthologs for Xcc-8004.608.1 only; 30 genomes with orthologs for Xcc-8004.5020.1 only