Conservation of cofitness between Psyr_0848 and Psyr_1985 in Pseudomonas syringae pv. syringae B728a

71 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0848 ketol-acid reductoisomerase 1.0 Psyr_1985 3-isopropylmalate dehydrogenase 0.93 8
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0848 ketol-acid reductoisomerase 1.00 Psyr_1985 3-isopropylmalate dehydrogenase 0.94 2
Pseudomonas segetis P6 0.96 MPMX49_01277 Ketol-acid reductoisomerase (NADP(+)) 0.90 MPMX49_03071 3-isopropylmalate dehydrogenase 0.83 12
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_1540 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.94 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.98 1
Pseudomonas sp. DMC3 0.95 GFF4052 Ketol-acid reductoisomerase (NADP(+)) 0.95 GFF788 3-isopropylmalate dehydrogenase 0.98 6
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_16180 ketol-acid reductoisomerase 0.94 AO356_21415 3-isopropylmalate dehydrogenase 0.97 8
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_14505 ketol-acid reductoisomerase 0.93 AO353_20635 3-isopropylmalate dehydrogenase 0.98 4
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_2880 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.93 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.94 7
Pseudomonas sp. S08-1 0.95 OH686_08115 ketol-acid reductoisomerase 0.86 OH686_04470 3-isopropylmalate dehydrogenase 0.90 2
Pseudomonas fluorescens SBW25 0.95 PFLU_RS25640 ketol-acid reductoisomerase 0.94 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.81 7
Pseudomonas lactucae CFBP13502 0.95 GEMAOFIL_04911 Ketol-acid reductoisomerase (NADP(+)) 0.93 GEMAOFIL_03945 3-isopropylmalate dehydrogenase 0.88 31
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS25640 ketol-acid reductoisomerase 0.94 PFLU_RS20565 3-isopropylmalate dehydrogenase 0.85 4
Pseudomonas simiae WCS417 0.95 PS417_23800 ketol-acid reductoisomerase 0.94 PS417_18585 3-isopropylmalate dehydrogenase 0.95 6
Pseudomonas sp. SVBP6 0.94 COO64_RS14995 ilvC ketol-acid reductoisomerase 0.91 COO64_RS05650 leuB 3-isopropylmalate dehydrogenase 0.99 1
Pseudomonas aeruginosa PUPa3 0.93 DQ20_RS52825 ilvC;inference=COORDINATES ketol-acid reductoisomerase 0.89 DQ20_RS34220 leuB;go_function=3-isopropylmalate 3-isopropylmalate dehydrogenase 0.97 3
Pseudomonas aeruginosa PA14 0.93 IKLFDK_30155 ketol-acid reductoisomerase 0.89 IKLFDK_15865 3-isopropylmalate dehydrogenase 0.98 2
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_5177 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.94 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.96 2
Pseudomonas aeruginosa MRSN321 0.93 DY961_RS09205 ilvC;inference=COORDINATES ketol-acid reductoisomerase 0.89 DY961_RS01335 leuB;go_function=3-isopropylmalate 3-isopropylmalate dehydrogenase 0.95 6
Pseudomonas putida KT2440 0.93 PP_4678 Ketol-acid reductoisomerase 0.91 PP_1988 3-isopropylmalate dehydrogenase 0.94 6
Pseudomonas sp. BP01 0.93 JOY50_RS27770 ilvC ketol-acid reductoisomerase 0.91 JOY50_RS16615 leuB 3-isopropylmalate dehydrogenase 0.98 11
Pseudomonas sp. RS175 0.93 PFR28_03697 Ketol-acid reductoisomerase (NADP(+)) 0.92 PFR28_02821 3-isopropylmalate dehydrogenase 0.87 2
Pseudomonas stutzeri RCH2 0.91 Psest_1038 ketol-acid reductoisomerase 0.88 Psest_2589 3-isopropylmalate dehydrogenase — —
Acinetobacter baumannii LAC-4 0.85 RR41_RS16325 ketol-acid reductoisomerase 0.73 RR41_RS16885 3-isopropylmalate dehydrogenase low > 55
Acinetobacter radioresistens SK82 0.85 MPMX26_00474 Ketol-acid reductoisomerase (NADP(+)) 0.72 MPMX26_00348 3-isopropylmalate dehydrogenase 0.99 4
Marinobacter adhaerens HP15 0.84 HP15_533 ketol-acid reductoisomerase 0.70 HP15_1832 3-isopropylmalate dehydrogenase — —
Dechlorosoma suillum PS 0.77 Dsui_3527 ketol-acid reductoisomerase 0.67 Dsui_3198 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.77 GFF4278 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.62 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Methylophilus sp. DMC18 0.76 GFF2519 Ketol-acid reductoisomerase (NADP(+)) 0.64 GFF648 3-isopropylmalate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.74 Ac3H11_527 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.62 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Herbaspirillum seropedicae SmR1 0.74 HSERO_RS19010 ketol-acid reductoisomerase 0.63 HSERO_RS16500 3-isopropylmalate dehydrogenase low > 78
Castellaniella sp019104865 MT123 0.73 ABCV34_RS01220 ketol-acid reductoisomerase 0.63 ABCV34_RS04280 3-isopropylmalate dehydrogenase 0.96 4
Variovorax sp. SCN45 0.72 GFF1161 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) 0.63 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Variovorax sp. OAS795 0.72 ABID97_RS14895 ketol-acid reductoisomerase 0.62 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum GMI1000 0.72 RS_RS10410 ketol-acid reductoisomerase 0.63 RS_RS09990 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum PSI07 0.72 RPSI07_RS14265 ketol-acid reductoisomerase 0.62 RPSI07_RS14705 3-isopropylmalate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.72 RR42_RS05445 ketol-acid reductoisomerase 0.62 RR42_RS14385 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.72 ABZR87_RS14945 ketol-acid reductoisomerase 0.63 ABZR87_RS14530 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum UW163 0.72 UW163_RS10685 ketol-acid reductoisomerase 0.63 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.72 RALBFv3_RS03040 ketol-acid reductoisomerase 0.63 RALBFv3_RS02610 3-isopropylmalate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS06555 ketol-acid reductoisomerase 0.62 BPHYT_RS33900 3-isopropylmalate dehydrogenase 0.94 7
Paraburkholderia graminis OAS925 0.70 ABIE53_001576 ketol-acid reductoisomerase 0.62 ABIE53_004804 3-isopropylmalate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.70 H281DRAFT_04553 ketol-acid reductoisomerase 0.62 H281DRAFT_06072 3-isopropylmalate dehydrogenase 0.43 30
Paraburkholderia sabiae LMG 24235 0.70 QEN71_RS24215 ketol-acid reductoisomerase 0.62 QEN71_RS17620 3-isopropylmalate dehydrogenase 0.80 58
Azospirillum sp. SherDot2 0.67 MPMX19_01774 Ketol-acid reductoisomerase (NADP(+)) 0.57 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.67 AZOBR_RS06570 ketol-acid reductoisomerase 0.55 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Rhodospirillum rubrum S1H 0.67 Rru_A0469 Ketol-acid reductoisomerase (NCBI) 0.58 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.92 16
Magnetospirillum magneticum AMB-1 0.67 AMB_RS17750 ketol-acid reductoisomerase 0.57 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase 0.51 CCNA_00193 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.66 CCNA_02204 ketol-acid reductoisomerase/2-dehydropantoate 2-reductase 0.51 CCNA_00193 3-isopropylmalate dehydrogenase — —
Xanthobacter sp. DMC5 0.66 GFF172 Ketol-acid reductoisomerase (NADP(+)) 0.53 GFF1695 3-isopropylmalate dehydrogenase — —
Rhodopseudomonas palustris CGA009 0.66 TX73_010485 ketol-acid reductoisomerase 0.53 TX73_001175 3-isopropylmalate dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.65 Ga0059261_0066 ketol-acid reductoisomerase (EC 1.1.1.86) 0.55 Ga0059261_3190 3-isopropylmalate dehydrogenase — —
Sinorhizobium meliloti 1021 0.65 SMc04346 ketol-acid reductoisomerase 0.57 SMc04405 3-isopropylmalate dehydrogenase 0.91 17
Sphingobium sp. HT1-2 0.64 GFF2057 Ketol-acid reductoisomerase (NADP(+)) (EC 1.1.1.86) 0.54 GFF3458 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.75 79
Rhizobium sp. OAE497 0.64 ABIE40_RS11360 ketol-acid reductoisomerase 0.57 ABIE40_RS19050 3-isopropylmalate dehydrogenase — —
Phaeobacter inhibens DSM 17395 0.63 PGA1_c06580 ketol-acid reductoisomerase IlvC 0.60 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB — —
Dinoroseobacter shibae DFL-12 0.62 Dshi_2396 ketol-acid reductoisomerase (RefSeq) 0.58 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Agrobacterium fabrum C58 0.62 Atu2019 ketol-acid reductoisomerase 0.57 Atu2791 3-isopropylmalate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.60 Synpcc7942_1552 ilvC ketol-acid reductoisomerase 0.57 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.57 DvMF_0155 ketol-acid reductoisomerase (RefSeq) 0.61 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.78 2
Desulfovibrio vulgaris Hildenborough JW710 0.56 DVU1378 ilvC ketol-acid reductoisomerase (TIGR) 0.57 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.95 3
Synechocystis sp000284455 PCC 6803 0.55 SGL_RS17215 ketol-acid reductoisomerase 0.58 SGL_RS09375 3-isopropylmalate dehydrogenase — —
Rhodanobacter sp000427505 FW510-R12 0.53 LRK53_RS03090 ketol-acid reductoisomerase 0.47 LRK53_RS03100 3-isopropylmalate dehydrogenase 0.94 1
Rhodanobacter denitrificans FW104-10B01 0.53 LRK54_RS10315 ketol-acid reductoisomerase 0.45 LRK54_RS10325 3-isopropylmalate dehydrogenase 0.95 3
Rhodanobacter denitrificans MT42 0.53 LRK55_RS09955 ketol-acid reductoisomerase 0.45 LRK55_RS09965 3-isopropylmalate dehydrogenase low > 63
Lysobacter sp. OAE881 0.53 ABIE51_RS17545 ketol-acid reductoisomerase 0.48 ABIE51_RS17585 3-isopropylmalate dehydrogenase 0.98 9
Xanthomonas campestris pv. campestris strain 8004 0.52 Xcc-8004.1060.1 Ketol-acid reductoisomerase (EC 1.1.1.86) 0.81 Xcc-8004.1053.1 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.81 25
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS15940 ketol-acid reductoisomerase 0.43 ABZR86_RS15950 3-isopropylmalate dehydrogenase 0.95 34
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_13605 ilvC ketol-acid reductoisomerase 0.44 OKGIIK_13595 leuB 3-isopropylmalate dehydrogenase 0.96 4
Brevundimonas sp. GW460-12-10-14-LB2 0.47 A4249_RS10025 ketol-acid reductoisomerase 0.44 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 24
Mucilaginibacter yixingensis YX-36 DSM 26809 0.22 ABZR88_RS11590 ketol-acid reductoisomerase 0.48 ABZR88_RS11605 3-isopropylmalate dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.22 Echvi_2058 ketol-acid reductoisomerase 0.45 Echvi_2062 3-isopropylmalate dehydrogenase — —

Not shown: 4 genomes with orthologs for Psyr_0848 only; 47 genomes with orthologs for Psyr_1985 only