Conservation of cofitness between Psyr_4756 and Psyr_0790 in Pseudomonas syringae pv. syringae B728a

68 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_4756 3-mercaptopyruvate sulfurtransferase 1.0 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 0.43 1
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_4756 3-mercaptopyruvate sulfurtransferase 1.00 Psyr_0790 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 86
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_4577 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.85 Pf6N2E2_5132 NADH dehydrogenase (EC 1.6.99.3) low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_2317 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.87 Pf1N1B4_2826 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_987 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.86 PfGW456L13_1496 NADH dehydrogenase (EC 1.6.99.3) low > 87
Pseudomonas sp. RS175 0.75 PFR28_04264 Putative thiosulfate sulfurtransferase SseB 0.85 PFR28_03740 NADH dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.74 AO356_13310 3-mercaptopyruvate sulfurtransferase 0.86 AO356_15965 NADH dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.74 AO353_08280 3-mercaptopyruvate sulfurtransferase 0.86 AO353_14255 NADH dehydrogenase low > 101
Pseudomonas simiae WCS417 0.74 PS417_26835 3-mercaptopyruvate sulfurtransferase 0.87 PS417_03855 NADH dehydrogenase low > 88
Pseudomonas fluorescens SBW25 0.73 PFLU_RS28480 sulfurtransferase 0.87 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS28480 sulfurtransferase 0.87 PFLU_RS03905 NAD(P)/FAD-dependent oxidoreductase low > 109
Pseudomonas putida KT2440 0.72 PP_5118 putative 3-mercaptopyruvate sulfurtransferase 0.81 PP_0626 NADH dehydrogenase low > 96
Pseudomonas sp. S08-1 0.67 OH686_05330 Thiosulfate sulfurtransferase, rhodanese 0.78 OH686_16450 NADH dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.64 Psest_2996 Rhodanese-related sulfurtransferase 0.78 Psest_0715 NADH dehydrogenase, FAD-containing subunit low > 67
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS33595 3-mercaptopyruvate sulfurtransferase 0.51 BPHYT_RS33605 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_06019 thiosulfate/3-mercaptopyruvate sulfurtransferase 0.51 H281DRAFT_06021 NADH dehydrogenase low > 103
Paraburkholderia graminis OAS925 0.43 ABIE53_004855 thiosulfate/3-mercaptopyruvate sulfurtransferase 0.51 ABIE53_004853 NADH dehydrogenase low > 113
Ralstonia solanacearum UW163 0.40 UW163_RS09940 sulfurtransferase 0.48 UW163_RS09925 NAD(P)/FAD-dependent oxidoreductase
Ralstonia solanacearum IBSBF1503 0.40 RALBFv3_RS03730 sulfurtransferase 0.48 RALBFv3_RS03745 NAD(P)/FAD-dependent oxidoreductase low > 76
Paraburkholderia sabiae LMG 24235 0.40 QEN71_RS15255 sulfurtransferase 0.50 QEN71_RS17890 NAD(P)/FAD-dependent oxidoreductase low > 153
Ralstonia solanacearum PSI07 0.40 RPSI07_RS13500 sulfurtransferase 0.48 RPSI07_RS13485 NAD(P)/FAD-dependent oxidoreductase low > 81
Ralstonia solanacearum GMI1000 0.40 RS_RS11175 sulfurtransferase 0.49 RS_RS11190 NAD(P)/FAD-dependent oxidoreductase
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS15660 sulfurtransferase 0.50 ABZR87_RS15675 NAD(P)/FAD-dependent oxidoreductase low > 80
Herbaspirillum seropedicae SmR1 0.39 HSERO_RS19150 3-mercaptopyruvate sulfurtransferase 0.16 HSERO_RS08760 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 78
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS15030 3-mercaptopyruvate sulfurtransferase 0.52 RR42_RS26100 pyridine nucleotide-disulfide oxidoreductase
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS15180 sulfurtransferase 0.40 LRK54_RS07490 NAD(P)/FAD-dependent oxidoreductase low > 59
Rhodanobacter denitrificans MT42 0.38 LRK55_RS14895 sulfurtransferase 0.40 LRK55_RS07230 NAD(P)/FAD-dependent oxidoreductase low > 63
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS00885 sulfurtransferase 0.13 ABZR86_RS12540 NAD(P)/FAD-dependent oxidoreductase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.3344.1 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.18 Xcc-8004.4769.1 NADH dehydrogenase (EC 1.6.99.3) low > 74
Variovorax sp. OAS795 0.35 ABID97_RS09255 sulfurtransferase 0.51 ABID97_RS26565 NAD(P)/FAD-dependent oxidoreductase
Variovorax sp. SCN45 0.35 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.16 GFF6814 NADH dehydrogenase (EC 1.6.99.3) low > 127
Synechococcus elongatus PCC 7942 0.34 Synpcc7942_2427 3-mercaptopyruvate sulfurtransferase 0.16 Synpcc7942_0101 ndbA type 2 NADH dehydrogenase
Acidovorax sp. GW101-3H11 0.33 Ac3H11_3561 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.16 Ac3H11_2167 NADH dehydrogenase (EC 1.6.99.3) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF5580 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.37 GFF4021 NADH dehydrogenase (EC 1.6.99.3)
Lysobacter sp. OAE881 0.32 ABIE51_RS07585 sulfurtransferase 0.18 ABIE51_RS02115 NAD(P)/FAD-dependent oxidoreductase low > 62
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS18335 sulfurtransferase 0.09 CA265_RS13110 FAD-dependent oxidoreductase low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.28 CA264_07665 sulfurtransferase 0.13 CA264_14170 FAD-dependent oxidoreductase low > 74
Mycobacterium tuberculosis H37Rv 0.26 Rv2291 Probable thiosulfate sulfurtransferase SseB 0.17 Rv1854c Probable NADH dehydrogenase Ndh
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_1387 Rhodanese-related sulfurtransferase 0.48 Ga0059261_1466 NADH dehydrogenase, FAD-containing subunit low > 68
Sinorhizobium meliloti 1021 0.22 SMc01172 thiosulfate sulfurtransferase 0.16 SMc04452 NADH dehydrogenase transmembrane protein low > 103
Rhodopseudomonas palustris CGA009 0.21 TX73_018725 3-mercaptopyruvate sulfurtransferase 0.52 TX73_005675 NAD(P)/FAD-dependent oxidoreductase low > 86
Erwinia tracheiphila SCR3 0.20 LU632_RS17855 sseA 3-mercaptopyruvate sulfurtransferase 0.53 LU632_RS14740 NAD(P)/FAD-dependent oxidoreductase low > 74
Escherichia coli BW25113 0.20 b2521 sseA putative thiosulfate sulfurtransferase (VIMSS) 0.52 b1109 ndh respiratory NADH dehydrogenase 2/cupric reductase (NCBI) low > 76
Escherichia coli ECRC62 0.20 BNILDI_12140 sseA 3-mercaptopyruvate sulfurtransferase 0.52 BNILDI_19185 ndh NADH-quinone dehydrogenase low > 75
Escherichia coli BL21 0.20 ECD_02413 3-mercaptopyruvate sulfurtransferase 0.52 ECD_01105 respiratory NADH dehydrogenase 2/cupric reductase low > 61
Escherichia coli ECOR27 0.20 NOLOHH_13340 sseA 3-mercaptopyruvate sulfurtransferase 0.52 NOLOHH_21020 ndh NADH-quinone dehydrogenase low > 75
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_17310 3-mercaptopyruvate sulfurtransferase 0.53 CSW01_09465 NAD(P)/FAD-dependent oxidoreductase low > 62
Escherichia coli ECOR38 0.20 HEPCGN_20810 sseA 3-mercaptopyruvate sulfurtransferase 0.52 HEPCGN_23990 ndh NADH-quinone dehydrogenase low > 87
Escherichia coli ECRC100 0.20 OKFHMN_21670 sseA 3-mercaptopyruvate sulfurtransferase 0.52 OKFHMN_03495 ndh NADH-quinone dehydrogenase low > 80
Escherichia coli ECRC99 0.20 KEDOAH_06550 sseA 3-mercaptopyruvate sulfurtransferase 0.52 KEDOAH_24260 ndh NADH-quinone dehydrogenase
Escherichia fergusonii Becca 0.20 EFB2_01369 3-mercaptopyruvate sulfurtransferase 0.52 EFB2_02866 NADH dehydrogenase low > 86
Escherichia coli Nissle 1917 0.20 ECOLIN_RS14320 3-mercaptopyruvate sulfurtransferase 0.52 ECOLIN_RS06400 NADH-quinone dehydrogenase
Enterobacter sp. TBS_079 0.20 MPMX20_03401 3-mercaptopyruvate sulfurtransferase 0.53 MPMX20_01790 NADH dehydrogenase low > 85
Escherichia coli ECRC102 0.20 NIAGMN_19440 sseA 3-mercaptopyruvate sulfurtransferase 0.52 NIAGMN_24335 ndh NADH-quinone dehydrogenase
Escherichia coli ECRC98 0.20 JDDGAC_25345 sseA 3-mercaptopyruvate sulfurtransferase 0.52 JDDGAC_07155 ndh NADH-quinone dehydrogenase low > 86
Escherichia coli ECRC101 0.20 MCAODC_12200 sseA 3-mercaptopyruvate sulfurtransferase 0.52 MCAODC_22855 ndh NADH-quinone dehydrogenase low > 87
Klebsiella michiganensis M5al 0.19 BWI76_RS21115 3-mercaptopyruvate sulfurtransferase 0.52 BWI76_RS11175 NADH dehydrogenase
Escherichia coli HS(pFamp)R (ATCC 700891) 0.19 OHPLBJKB_01188 3-mercaptopyruvate sulfurtransferase 0.52 OHPLBJKB_02557 NADH dehydrogenase low > 73
Pantoea sp. MT58 0.19 IAI47_05020 3-mercaptopyruvate sulfurtransferase 0.52 IAI47_11985 NAD(P)/FAD-dependent oxidoreductase low > 76
Enterobacter asburiae PDN3 0.19 EX28DRAFT_0120 Rhodanese-related sulfurtransferase 0.53 EX28DRAFT_1821 NADH dehydrogenase, FAD-containing subunit low > 76
Marinobacter adhaerens HP15 0.19 HP15_3958 rhodanese domain protein 0.54 HP15_3830 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 73
Rhizobium sp. OAE497 0.19 ABIE40_RS08275 3-mercaptopyruvate sulfurtransferase 0.16 ABIE40_RS11380 NAD(P)/FAD-dependent oxidoreductase low > 107
Serratia liquefaciens MT49 0.19 IAI46_07285 3-mercaptopyruvate sulfurtransferase 0.54 IAI46_09910 NAD(P)/FAD-dependent oxidoreductase low > 86
Rahnella sp. WP5 0.18 EX31_RS21925 3-mercaptopyruvate sulfurtransferase 0.53 EX31_RS24510 NAD(P)/FAD-dependent oxidoreductase low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF2422 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.52 GFF3392 NADH dehydrogenase (EC 1.6.99.3) low > 78
Shewanella loihica PV-4 0.17 Shew_0968 3-mercaptopyruvate sulfurtransferase (RefSeq) 0.47 Shew_2195 NADH dehydrogenase (RefSeq) low > 60
Azospirillum brasilense Sp245 0.17 AZOBR_RS08695 3-mercaptopyruvate sulfurtransferase 0.19 AZOBR_RS00545 FAD-dependent pyridine nucleotide-disulfide oxidoreductase low > 97
Shewanella sp. ANA-3 0.16 Shewana3_3103 rhodanese domain-containing protein (RefSeq) 0.38 Shewana3_3123 FAD-dependent pyridine nucleotide-disulphide oxidoreductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.16 SO1261 mercaptopyruvate sulfurtransferase (NCBI ptt file) 0.38 SO3517 ndh NADH dehydrogenase (NCBI ptt file) low > 76

Not shown: 11 genomes with orthologs for Psyr_4756 only; 15 genomes with orthologs for Psyr_0790 only