Conservation of cofitness between Pf6N2E2_4412 and Pf6N2E2_3072 in Pseudomonas fluorescens FW300-N2E2

79 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E2 1.0 Pf6N2E2_4412 Ammonium transporter 1.0 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.54 10
Pseudomonas fluorescens FW300-N2C3 1.00 AO356_12705 ammonia channel protein 0.99 AO356_06050 protein-PII uridylyltransferase 0.51 10
Pseudomonas sp. RS175 0.99 PFR28_04382 Ammonia channel 0.96 PFR28_00394 Bifunctional uridylyltransferase/uridylyl-removing enzyme low > 88
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2167 Ammonium transporter 0.95 Pf1N1B4_3081 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.48 8
Pseudomonas fluorescens GW456-L13 0.91 PfGW456L13_838 Ammonium transporter 0.95 PfGW456L13_4711 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.77 1
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS29300 ammonium transporter 0.95 PFLU_RS06265 [protein-PII] uridylyltransferase 0.71 2
Pseudomonas fluorescens SBW25 0.90 PFLU_RS29300 ammonium transporter 0.95 PFLU_RS06265 [protein-PII] uridylyltransferase low > 109
Pseudomonas simiae WCS417 0.88 PS417_27615 ammonia channel protein 0.95 PS417_06200 protein-PII uridylyltransferase 0.57 3
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_09070 ammonia channel protein 0.95 AO353_16450 protein-PII uridylyltransferase 0.72 2
Pseudomonas sp. S08-1 0.87 OH686_13760 Ammonium transporter 0.84 OH686_06495 protein-P-II uridylyltransferase low > 80
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_0189 ammonium transporter 0.87 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_0189 ammonium transporter 0.87 Psyr_1341 Protein-P-II uridylyltransferase low > 86
Pseudomonas stutzeri RCH2 0.84 Psest_3772 ammonium transporter 0.81 Psest_2845 [Protein-PII] uridylyltransferase 0.21 15
Pseudomonas putida KT2440 0.83 PP_5233 ammonium transporter AmtB 0.88 PP_1589 uridylyltransferase 0.54 3
Dyella japonica UNC79MFTsu3.2 0.71 ABZR86_RS09495 ammonium transporter 0.31 ABZR86_RS21575 [protein-PII] uridylyltransferase 0.47 19
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS01405 ammonium transporter 0.31 QEN71_RS06410 [protein-PII] uridylyltransferase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_02012 ammonium transporter 0.31 H281DRAFT_00608 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 103
Paraburkholderia graminis OAS925 0.57 ABIE53_000655 Amt family ammonium transporter 0.31 ABIE53_002507 [protein-PII] uridylyltransferase 0.30 37
Azospirillum brasilense Sp245 0.57 AZOBR_RS00845 ammonia channel protein 0.24 AZOBR_RS02110 protein-PII uridylyltransferase 0.52 1
Rhodospirillum rubrum S1H 0.57 Rru_A1129 Ammonium transporter (NCBI) 0.22 Rru_A3539 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) 0.45 45
Burkholderia phytofirmans PsJN 0.57 BPHYT_RS02550 ammonia channel protein 0.32 BPHYT_RS12150 PII uridylyl-transferase low > 109
Azospirillum sp. SherDot2 0.56 MPMX19_02223 Ammonia channel 0.23 MPMX19_00912 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.51 36
Magnetospirillum magneticum AMB-1 0.56 AMB_RS00080 ammonium transporter 0.24 AMB_RS22650 [protein-PII] uridylyltransferase — —
Herbaspirillum seropedicae SmR1 0.53 HSERO_RS00425 ammonia channel protein 0.33 HSERO_RS10865 PII uridylyl-transferase 0.60 8
Ralstonia solanacearum PSI07 0.53 RPSI07_RS22460 ammonia channel protein 0.31 RPSI07_RS17110 [protein-PII] uridylyltransferase low > 81
Ralstonia solanacearum GMI1000 0.53 RS_RS01690 ammonium transporter 0.30 RS_RS07035 bifunctional uridylyltransferase/uridylyl-removing protein — —
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS10850 ammonia channel protein 0.30 RALBFv3_RS00365 [protein-PII] uridylyltransferase low > 76
Ralstonia solanacearum UW163 0.53 UW163_RS02730 ammonia channel protein 0.30 UW163_RS13695 [protein-PII] uridylyltransferase — —
Ralstonia sp. UNC404CL21Col 0.52 ABZR87_RS06700 ammonium transporter 0.31 ABZR87_RS11815 [protein-PII] uridylyltransferase 0.45 16
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS01760 ammonia channel protein 0.30 RR42_RS11885 (protein-PII) uridylyltransferase 0.42 4
Bosea sp. OAE506 0.51 ABIE41_RS04755 ammonium transporter 0.23 ABIE41_RS00205 [protein-PII] uridylyltransferase low > 77
Shewanella sp. ANA-3 0.51 Shewana3_0778 ammonium transporter (RefSeq) 0.36 Shewana3_2817 PII uridylyl-transferase (RefSeq) low > 73
Acinetobacter radioresistens SK82 0.51 MPMX26_00150 Ammonia channel 0.38 MPMX26_01867 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.66 2
Variovorax sp. SCN45 0.51 GFF5119 Ammonium transporter 0.30 GFF1322 [Protein-PII] uridylyltransferase (EC 2.7.7.59) / [Protein-PII]-UMP uridylyl-removing enzyme low > 127
Dechlorosoma suillum PS 0.50 Dsui_0763 ammonium transporter 0.33 Dsui_2696 (protein-PII) uridylyltransferase low > 51
Sphingomonas koreensis DSMZ 15582 0.50 Ga0059261_2256 ammonium transporter 0.24 Ga0059261_2737 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 68
Rhodopseudomonas palustris CGA009 0.50 TX73_001435 ammonium transporter 0.23 TX73_003060 [protein-PII] uridylyltransferase low > 86
Rhizobium sp. OAE497 0.49 ABIE40_RS18420 ammonium transporter 0.23 ABIE40_RS01765 [protein-PII] uridylyltransferase low > 107
Xanthomonas campestris pv. campestris strain 8004 0.49 Xcc-8004.249.1 Ammonium transporter 0.31 Xcc-8004.3543.1 [Protein-PII] uridylyltransferase (EC 2.7.7.59) — —
Erwinia tracheiphila SCR3 0.49 LU632_RS18270 amtB ammonium transporter AmtB 0.36 LU632_RS19980 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.49 GFF1922 Ammonium transporter 0.30 GFF4563 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 90
Variovorax sp. OAS795 0.49 ABID97_RS03635 ammonium transporter 0.30 ABID97_RS15665 [protein-PII] uridylyltransferase low > 91
Serratia liquefaciens MT49 0.48 IAI46_05085 ammonium transporter AmtB 0.37 IAI46_20270 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 86
Acidovorax sp. GW101-3H11 0.48 Ac3H11_3401 Ammonium transporter 0.30 Ac3H11_537 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.42 4
Pantoea sp. MT58 0.48 IAI47_14580 ammonium transporter AmtB 0.36 IAI47_15540 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 76
Sinorhizobium meliloti 1021 0.48 SMc03807 ammonium transporter 0.23 SMc01124 PII uridylyl-transferase low > 103
Pectobacterium carotovorum WPP14 0.47 HER17_RS15785 ammonium transporter AmtB 0.38 HER17_RS16345 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 75
Caulobacter crescentus NA1000 0.47 CCNA_01399 ammonium transporter/methylammonium transporter 0.21 CCNA_00013 protein-PII uridylyltransferase low > 66
Caulobacter crescentus NA1000 Δfur 0.47 CCNA_01399 ammonium transporter/methylammonium transporter 0.21 CCNA_00013 protein-PII uridylyltransferase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF4368 Ammonium transporter 0.36 GFF55 [Protein-PII] uridylyltransferase (EC 2.7.7.59) low > 78
Klebsiella michiganensis M5al 0.46 BWI76_RS06605 ammonium transporter 0.36 BWI76_RS05200 bifunctional uridylyltransferase/uridylyl-removing protein 0.39 8
Agrobacterium fabrum C58 0.46 Atu2758 ammonium transporter 0.23 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase 0.24 49
Escherichia fergusonii Becca 0.46 EFB2_03606 Ammonia channel 0.37 EFB2_03878 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS02700 ammonium transporter AmtB 0.37 ECOLIN_RS00915 bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli BW25113 0.45 b0451 amtB ammonium transporter (NCBI) 0.37 b0167 glnD PII uridylyl-transferase (NCBI) 0.20 19
Enterobacter sp. TBS_079 0.45 MPMX20_01043 Ammonia channel 0.36 MPMX20_00851 Bifunctional uridylyltransferase/uridylyl-removing enzyme — —
Escherichia coli ECRC101 0.45 MCAODC_27485 amtB ammonium transporter AmtB 0.37 MCAODC_00750 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC100 0.45 OKFHMN_08260 amtB ammonium transporter AmtB 0.37 OKFHMN_10235 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC102 0.45 NIAGMN_06315 amtB ammonium transporter AmtB 0.37 NIAGMN_08085 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC62 0.45 BNILDI_22610 amtB ammonium transporter AmtB 0.37 BNILDI_09090 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_03222 Ammonia channel 0.37 OHPLBJKB_03497 Bifunctional uridylyltransferase/uridylyl-removing enzyme low > 73
Escherichia coli ECOR38 0.45 HEPCGN_06875 amtB ammonium transporter AmtB 0.37 HEPCGN_08185 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC98 0.45 JDDGAC_11915 amtB ammonium transporter AmtB 0.37 JDDGAC_13830 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli ECRC99 0.45 KEDOAH_19705 amtB ammonium transporter AmtB 0.37 KEDOAH_17920 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Escherichia coli BL21 0.45 ECD_00403 ammonium transporter 0.37 ECD_00165 uridylyltransferase low > 61
Escherichia coli ECOR27 0.45 NOLOHH_01195 amtB ammonium transporter AmtB 0.37 NOLOHH_02580 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD — —
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2518 ammonium transporter 0.36 EX28DRAFT_3754 UTP--GlnB (protein PII) uridylyltransferase, GlnD low > 76
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_14925 Ammonium transporter 0.32 OKGIIK_10125 glnD [protein-PII] uridylyltransferase low > 52
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS08110 ammonium transporter 0.33 LRK54_RS03245 [protein-PII] uridylyltransferase — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS07860 ammonium transporter 0.33 LRK55_RS02995 [protein-PII] uridylyltransferase — —
Rahnella sp. WP5 0.44 EX31_RS22320 ammonium transporter AmtB 0.36 EX31_RS13045 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 89
Brevundimonas sp. GW460-12-10-14-LB2 0.43 A4249_RS09990 ammonium transporter 0.23 A4249_RS13590 [protein-PII] uridylyltransferase low > 48
Dickeya dianthicola 67-19 0.43 HGI48_RS05745 ammonium transporter AmtB 0.37 HGI48_RS05105 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.50 48
Dickeya dianthicola ME23 0.43 DZA65_RS06070 ammonium transporter AmtB 0.37 DZA65_RS05445 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 75
Phaeobacter inhibens DSM 17395 0.42 PGA1_c14730 ammonia channel 0.21 PGA1_c26750 uridylyltransferase GlnD — —
Dickeya dadantii 3937 0.42 DDA3937_RS05700 ammonium transporter AmtB 0.37 DDA3937_RS05105 bifunctional uridylyltransferase/uridylyl-removing protein GlnD low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.41 DVU1231 amt ammonium transporter (TIGR) 0.13 DVU1233 glnD protein-P-II uridylyltransferase, putative (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_0866 ammonium transporter (RefSeq) 0.12 DvMF_0864 UTP-GlnB uridylyltransferase, GlnD (RefSeq) low > 51
Castellaniella sp019104865 MT123 0.37 ABCV34_RS04770 ammonium transporter 0.29 ABCV34_RS04120 [protein-PII] uridylyltransferase low > 48
Mycobacterium tuberculosis H37Rv 0.37 Rv2920c Probable ammonium-transport integral membrane protein Amt 0.10 Rv2918c Probable [protein-PII] uridylyltransferase GlnD (PII uridylyl-transferase) (uridylyl removing enzyme) (UTASE) low > 58

Not shown: 10 genomes with orthologs for Pf6N2E2_4412 only; 8 genomes with orthologs for Pf6N2E2_3072 only