| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_4724 | | Carbamoyl-phosphate synthase small chain | 1.0 | PP_2371 | | Sulphite reductase hemoprotein, beta subunit | 0.52 | 20 |
| Pseudomonas fluorescens FW300-N2E3 | 0.94 | AO353_05635 | | carbamoyl phosphate synthase small subunit | 0.90 | AO353_22800 | | sulfite reductase | — | — |
| Pseudomonas fluorescens FW300-N1B4 | 0.93 | Pf1N1B4_1173 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.91 | Pf1N1B4_5665 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Pseudomonas simiae WCS417 | 0.93 | PS417_24045 | | carbamoyl phosphate synthase small subunit | 0.91 | PS417_12290 | | sulfite reductase | — | — |
| Pseudomonas fluorescens FW300-N2C3 | 0.92 | AO356_07485 | | carbamoyl phosphate synthase small subunit | 0.91 | AO356_00555 | | sulfite reductase | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.92 | Pf6N2E2_3365 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.91 | Pf6N2E2_2073 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Pseudomonas sp. RS175 | 0.92 | PFR28_00076 | | Carbamoyl-phosphate synthase small chain | 0.92 | PFR28_01366 | | Sulfite reductase [ferredoxin] | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.92 | PfGW456L13_5100 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.91 | PfGW456L13_2843 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS25885 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.91 | PFLU_RS12980 | | nitrite/sulfite reductase | — | — |
| Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS25885 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.91 | PFLU_RS12980 | | nitrite/sulfite reductase | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.91 | Psyr_4192 | | carbamoyl-phosphate synthase small subunit | 0.91 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | — | — |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.91 | Psyr_4192 | | carbamoyl-phosphate synthase small subunit | 0.91 | Psyr_2462 | | Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region | — | — |
| Pseudomonas sp. S08-1 | 0.88 | OH686_17075 | | Carbamoyl-phosphate synthase small chain | 0.86 | OH686_03470 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Pseudomonas stutzeri RCH2 | 0.87 | Psest_0967 | | carbamoyl-phosphate synthase, small subunit | 0.82 | Psest_2089 | | Sulfite reductase, beta subunit (hemoprotein) | — | — |
| Marinobacter adhaerens HP15 | 0.75 | HP15_3078 | | carbamoyl-phosphate synthase small chain | 0.70 | HP15_1795 | | sulfite reductase hemoprotein, beta subunit | 0.30 | 46 |
| Shewanella amazonensis SB2B | 0.74 | Sama_2504 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.07 | Sama_2838 | | sulfite reductase subunit beta (RefSeq) | 0.79 | 16 |
| Rahnella sp. WP5 | 0.72 | EX31_RS03835 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | EX31_RS07900 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.92 | 50 |
| Shewanella oneidensis MR-1 | 0.72 | SO1141 | carA | carbamoyl-phosphate synthase, small subunit (NCBI ptt file) | 0.07 | SO3737 | cysI | sulfite reductase (NADPH) hemoprotein beta-component (cysI) (NCBI ptt file) | 0.92 | 8 |
| Pectobacterium carotovorum WPP14 | 0.72 | HER17_RS02895 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | HER17_RS04240 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.90 | 61 |
| Enterobacter asburiae PDN3 | 0.72 | EX28DRAFT_3637 | | carbamoyl-phosphate synthase, small subunit | 0.08 | EX28DRAFT_2852 | | sulfite reductase (NADPH) hemoprotein, beta-component | — | — |
| Klebsiella michiganensis M5al | 0.72 | BWI76_RS04465 | | carbamoyl-phosphate synthase small subunit | 0.08 | BWI76_RS22760 | | sulfite reductase subunit beta | 0.52 | 43 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.71 | GFF214 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.07 | GFF4819 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | low | > 78 |
| Kangiella aquimarina DSM 16071 | 0.71 | B158DRAFT_0615 | | carbamoyl-phosphate synthase, small subunit | 0.09 | B158DRAFT_2161 | | sulfite reductase (NADPH) beta subunit (EC 1.8.1.2) | — | — |
| Escherichia coli BW25113 | 0.71 | b0032 | carA | carbamoyl-phosphate synthase small subunit (NCBI) | 0.07 | b2763 | cysI | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding (NCBI) | 0.84 | 37 |
| Escherichia coli BL21 | 0.71 | ECD_00036 | | carbamoyl phosphate synthetase small subunit, glutamine amidotransferase | 0.07 | ECD_02608 | | sulfite reductase, beta subunit, NAD(P)-binding, heme-binding | low | > 60 |
| Escherichia coli Nissle 1917 | 0.71 | ECOLIN_RS00175 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | ECOLIN_RS15405 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 52 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.71 | OHPLBJKB_03625 | | Carbamoyl-phosphate synthase small chain | 0.07 | OHPLBJKB_00970 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 73 |
| Escherichia fergusonii Becca | 0.71 | EFB2_04013 | | Carbamoyl-phosphate synthase small chain | 0.07 | EFB2_01154 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 86 |
| Enterobacter sp. TBS_079 | 0.71 | MPMX20_00739 | | Carbamoyl-phosphate synthase small chain | 0.07 | MPMX20_03642 | | Sulfite reductase [NADPH] hemoprotein beta-component | low | > 85 |
| Alteromonas macleodii MIT1002 | 0.71 | MIT1002_01466 | | Carbamoyl-phosphate synthase small chain | 0.07 | MIT1002_03379 | | Sulfite reductase [NADPH] hemoprotein beta-component | — | — |
| Dickeya dianthicola ME23 | 0.71 | DZA65_RS19385 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | DZA65_RS18085 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.60 | 64 |
| Escherichia coli ECRC102 | 0.71 | NIAGMN_08795 | carA | carbamoyl phosphate synthase small subunit | 0.07 | NIAGMN_18145 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC101 | 0.71 | OKFHMN_10945 | carA | carbamoyl phosphate synthase small subunit | 0.07 | OKFHMN_20375 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC62 | 0.71 | BNILDI_08325 | carA | carbamoyl phosphate synthase small subunit | 0.07 | BNILDI_10740 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECOR27 | 0.71 | NOLOHH_03275 | carA | carbamoyl phosphate synthase small subunit | 0.07 | NOLOHH_12190 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 57 |
| Escherichia coli ECRC98 | 0.71 | JDDGAC_14540 | carA | carbamoyl phosphate synthase small subunit | 0.07 | JDDGAC_24040 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC99 | 0.71 | KEDOAH_17210 | carA | carbamoyl phosphate synthase small subunit | 0.07 | KEDOAH_07750 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Escherichia coli ECRC101 | 0.71 | MCAODC_01460 | carA | carbamoyl phosphate synthase small subunit | 0.07 | MCAODC_10900 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Dickeya dadantii 3937 | 0.71 | DDA3937_RS18310 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | DDA3937_RS16940 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.78 | 36 |
| Dickeya dianthicola 67-19 | 0.71 | HGI48_RS18245 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | HGI48_RS17010 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.68 | 38 |
| Escherichia coli ECOR38 | 0.71 | HEPCGN_08930 | carA | carbamoyl phosphate synthase small subunit | 0.07 | HEPCGN_19090 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 85 |
| Shewanella loihica PV-4 | 0.71 | Shew_2839 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.08 | Shew_0666 | | sulfite reductase subunit beta (RefSeq) | 0.83 | 59 |
| Lysobacter sp. OAE881 | 0.70 | ABIE51_RS11625 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | ABIE51_RS15830 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.53 | 60 |
| Shewanella sp. ANA-3 | 0.70 | Shewana3_0967 | | carbamoyl phosphate synthase small subunit (RefSeq) | 0.07 | Shewana3_0856 | | sulfite reductase subunit beta (RefSeq) | 0.92 | 24 |
| Serratia liquefaciens MT49 | 0.70 | IAI46_03190 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | IAI46_03690 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 86 |
| Acinetobacter radioresistens SK82 | 0.70 | MPMX26_00767 | | Carbamoyl-phosphate synthase small chain | 0.67 | MPMX26_00614 | | Sulfite reductase [ferredoxin] | 0.85 | 16 |
| Dechlorosoma suillum PS | 0.69 | Dsui_3065 | | carbamoyl-phosphate synthase, small subunit | 0.69 | Dsui_1986 | | sulfite reductase, beta subunit (hemoprotein) | — | — |
| Pantoea sp. MT58 | 0.69 | IAI47_16120 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.08 | IAI47_04155 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | 0.82 | 62 |
| Cupriavidus basilensis FW507-4G11 | 0.69 | RR42_RS13520 | | carbamoyl phosphate synthase small subunit | 0.64 | RR42_RS16270 | | sulfite reductase | — | — |
| Ralstonia solanacearum PSI07 | 0.69 | RPSI07_RS15245 | | carbamoyl-phosphate synthase small subunit | 0.64 | RPSI07_RS12775 | | nitrite/sulfite reductase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.68 | RALBFv3_RS02200 | | carbamoyl-phosphate synthase small subunit | 0.64 | RALBFv3_RS04600 | | sulfite reductase | — | — |
| Ralstonia solanacearum UW163 | 0.68 | UW163_RS15510 | | carbamoyl-phosphate synthase small subunit | 0.64 | UW163_RS09070 | | sulfite reductase | — | — |
| Ralstonia sp. UNC404CL21Col | 0.68 | ABZR87_RS14150 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.63 | ABZR87_RS00210 | | nitrite/sulfite reductase | — | — |
| Erwinia tracheiphila SCR3 | 0.68 | LU632_RS02755 | carA | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.07 | LU632_RS06405 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 74 |
| Paraburkholderia sabiae LMG 24235 | 0.68 | QEN71_RS04775 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.67 | QEN71_RS25255 | | nitrite/sulfite reductase | — | — |
| Ralstonia solanacearum GMI1000 | 0.68 | RS_RS07620 | | carbamoyl-phosphate synthase small subunit | 0.63 | RS_RS12170 | | nitrite/sulfite reductase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.68 | HSERO_RS06920 | | carbamoyl phosphate synthase small subunit | 0.68 | HSERO_RS15550 | | sulfite reductase | — | — |
| Burkholderia phytofirmans PsJN | 0.66 | BPHYT_RS14195 | | carbamoyl phosphate synthase small subunit | 0.67 | BPHYT_RS04725 | | sulfite reductase | 0.60 | 37 |
| Acidovorax sp. GW101-3H11 | 0.66 | Ac3H11_435 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.56 | Ac3H11_577 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Variovorax sp. OAS795 | 0.66 | ABID97_RS17090 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.55 | ABID97_RS15380 | | nitrite/sulfite reductase | — | — |
| Paraburkholderia graminis OAS925 | 0.66 | ABIE53_003005 | | carbamoyl-phosphate synthase small subunit | 0.67 | ABIE53_001226 | | sulfite reductase (NADPH) hemoprotein beta-component | — | — |
| Rhodanobacter sp. FW510-T8 | 0.66 | OKGIIK_07300 | | carbamoyl phosphate synthase small subunit | 0.07 | OKGIIK_05965 | cysI | assimilatory sulfite reductase (NADPH) hemoprotein subunit | low | > 52 |
| Variovorax sp. SCN45 | 0.66 | GFF377 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.53 | GFF1206 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Paraburkholderia bryophila 376MFSha3.1 | 0.66 | H281DRAFT_04402 | | carbamoyl-phosphate synthase small subunit | 0.67 | H281DRAFT_00114 | | sulfite reductase (NADPH) beta subunit | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.64 | GFF4899 | | Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) | 0.54 | GFF4293 | | Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2) | — | — |
| Castellaniella sp019104865 MT123 | 0.62 | ABCV34_RS15505 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.08 | ABCV34_RS00215 | | assimilatory sulfite reductase (NADPH) hemoprotein subunit | — | — |
| Phaeobacter inhibens DSM 17395 | 0.52 | PGA1_c06670 | | carbamoyl-phosphate synthase small chain | 0.50 | PGA1_c20760 | | putative nitrite/sulfite reductase | — | — |
| Azospirillum sp. SherDot2 | 0.52 | MPMX19_00757 | | Carbamoyl-phosphate synthase small chain | 0.55 | MPMX19_00652 | | Sulfite reductase [ferredoxin] | — | — |
| Azospirillum brasilense Sp245 | 0.51 | AZOBR_RS10920 | | carbamoyl phosphate synthase small subunit | 0.57 | AZOBR_RS10125 | | sulfite reductase | — | — |
| Rhodospirillum rubrum S1H | 0.50 | Rru_A2885 | | Carbamoyl-phosphate synthase, small subunit (NCBI) | 0.56 | Rru_A1931 | | Ferredoxin--nitrite reductase (NCBI) | — | — |
| Rhodopseudomonas palustris CGA009 | 0.50 | TX73_006555 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.56 | TX73_021840 | | nitrite/sulfite reductase | — | — |
| Brevundimonas sp. GW460-12-10-14-LB2 | 0.50 | A4249_RS16140 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.56 | A4249_RS09665 | | nitrite/sulfite reductase | — | — |
| Dinoroseobacter shibae DFL-12 | 0.49 | Dshi_2387 | | carbamoyl-phosphate synthase, small subunit (RefSeq) | 0.52 | Dshi_1153 | | nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein (RefSeq) | — | — |
| Sinorhizobium meliloti 1021 | 0.48 | SMc01569 | | carbamoyl phosphate synthase small subunit | 0.54 | SMc02124 | | nitrite reductase | 0.52 | 91 |
| Bosea sp. OAE506 | 0.47 | ABIE41_RS11975 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.57 | ABIE41_RS15335 | | nitrite/sulfite reductase | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.47 | Ga0059261_4243 | | carbamoyl-phosphate synthase, small subunit | 0.58 | Ga0059261_1498 | | Sulfite reductase, beta subunit (hemoprotein) | — | — |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS12765 | | glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit | 0.58 | ABIE40_RS20885 | | DUF2849 domain-containing protein | — | — |
| Agrobacterium fabrum C58 | 0.47 | Atu2170 | | carbamoylphosphate synthase small chain | 0.54 | Atu1456 | | sulfite reductase (NADPH) hemoprotein beta-component | — | — |
| Caulobacter crescentus NA1000 | 0.47 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.56 | CCNA_01177 | | sulfite reductase, beta subunit | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.47 | CCNA_02925 | | carbamoyl-phosphate synthase small chain | 0.56 | CCNA_01177 | | sulfite reductase, beta subunit | low | > 67 |
| Synechococcus elongatus PCC 7942 | 0.45 | Synpcc7942_2122 | carA | carbamoyl phosphate synthase small subunit | 0.14 | Synpcc7942_1240 | nirA | ferredoxin-nitrite reductase | — | — |
Not shown: 23 genomes with orthologs for PP_4724 only; 0 genomes with orthologs for PP_2371 only