Conservation of cofitness between PP_5289 and PP_1988 in Pseudomonas putida KT2440

61 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5289 Acetylglutamate kinase 1.0 PP_1988 3-isopropylmalate dehydrogenase 0.81 11
Pseudomonas sp. S08-1 0.93 OH686_13600 N-acetylglutamate kinase 0.87 OH686_04470 3-isopropylmalate dehydrogenase 0.67 27
Pseudomonas syringae pv. syringae B728a ΔmexB 0.92 Psyr_0218 N-acetylglutamate kinase 0.91 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.92 Psyr_0218 N-acetylglutamate kinase 0.91 Psyr_1985 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_793 Acetylglutamate kinase (EC 2.7.2.8) 0.93 PfGW456L13_3945 3-isopropylmalate dehydrogenase (EC 1.1.1.85) 0.60 17
Pseudomonas sp. RS175 0.91 PFR28_04416 Acetylglutamate kinase 0.93 PFR28_02821 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_4373 Acetylglutamate kinase (EC 2.7.2.8) 0.94 Pf6N2E2_66 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2121 Acetylglutamate kinase (EC 2.7.2.8) 0.93 Pf1N1B4_12 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Pseudomonas fluorescens FW300-N2C3 0.91 AO356_12525 acetylglutamate kinase 0.94 AO356_21415 3-isopropylmalate dehydrogenase 0.91 18
Pseudomonas simiae WCS417 0.91 PS417_27790 acetylglutamate kinase 0.93 PS417_18585 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_09240 acetylglutamate kinase 0.92 AO353_20635 3-isopropylmalate dehydrogenase 0.60 29
Pseudomonas fluorescens SBW25-INTG 0.91 PFLU_RS29470 acetylglutamate kinase 0.93 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas fluorescens SBW25 0.91 PFLU_RS29470 acetylglutamate kinase 0.93 PFLU_RS20565 3-isopropylmalate dehydrogenase — —
Pseudomonas stutzeri RCH2 0.88 Psest_3807 acetylglutamate kinase 0.87 Psest_2589 3-isopropylmalate dehydrogenase — —
Marinobacter adhaerens HP15 0.75 HP15_3317 acetylglutamate kinase 0.73 HP15_1832 3-isopropylmalate dehydrogenase 0.76 4
Acinetobacter radioresistens SK82 0.65 MPMX26_02413 Acetylglutamate kinase 0.73 MPMX26_00348 3-isopropylmalate dehydrogenase 0.87 18
Dechlorosoma suillum PS 0.59 Dsui_1309 acetylglutamate kinase 0.68 Dsui_3198 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum GMI1000 0.58 RS_RS00165 acetylglutamate kinase 0.64 RS_RS09990 3-isopropylmalate dehydrogenase — —
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS05170 acetylglutamate kinase 0.65 ABZR87_RS14530 3-isopropylmalate dehydrogenase 0.61 79
Ralstonia solanacearum UW163 0.57 UW163_RS04000 acetylglutamate kinase 0.64 UW163_RS11115 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.57 RALBFv3_RS09580 acetylglutamate kinase 0.64 RALBFv3_RS02610 3-isopropylmalate dehydrogenase — —
Ralstonia solanacearum PSI07 0.57 RPSI07_RS23785 acetylglutamate kinase 0.63 RPSI07_RS14705 3-isopropylmalate dehydrogenase — —
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS21495 acetylglutamate kinase 0.65 HSERO_RS16500 3-isopropylmalate dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS01125 acetylglutamate kinase 0.64 RR42_RS14385 3-isopropylmalate dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS00305 acetylglutamate kinase 0.63 QEN71_RS17620 3-isopropylmalate dehydrogenase — —
Castellaniella sp019104865 MT123 0.56 ABCV34_RS14295 acetylglutamate kinase 0.63 ABCV34_RS04280 3-isopropylmalate dehydrogenase — —
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS01610 acetylglutamate kinase 0.64 BPHYT_RS33900 3-isopropylmalate dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_02211 N-acetylglutamate kinase 0.65 H281DRAFT_06072 3-isopropylmalate dehydrogenase — —
Variovorax sp. SCN45 0.56 GFF4624 N-acetylglutamate kinase (EC 2.7.2.8) 0.64 GFF3888 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Paraburkholderia graminis OAS925 0.56 ABIE53_000417 acetylglutamate kinase 0.65 ABIE53_004804 3-isopropylmalate dehydrogenase — —
Acidovorax sp. GW101-3H11 0.56 Ac3H11_1907 Acetylglutamate kinase (EC 2.7.2.8) 0.64 Ac3H11_1528 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Variovorax sp. OAS795 0.56 ABID97_RS05760 acetylglutamate kinase 0.64 ABID97_RS08455 3-isopropylmalate dehydrogenase — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS03285 acetylglutamate kinase 0.55 AZOBR_RS14130 3-isopropylmalate dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF409 Acetylglutamate kinase (EC 2.7.2.8) 0.63 GFF3360 3-isopropylmalate dehydrogenase (EC 1.1.1.85) — —
Rhodospirillum rubrum S1H 0.52 Rru_A3341 Acetylglutamate kinase (NCBI) 0.56 Rru_A1191 3-isopropylmalate dehydrogenase (NCBI) 0.56 17
Desulfovibrio vulgaris Miyazaki F 0.51 DvMF_0306 acetylglutamate kinase (RefSeq) 0.61 DvMF_1794 3-isopropylmalate dehydrogenase (RefSeq) 0.96 11
Azospirillum sp. SherDot2 0.51 MPMX19_00333 Acetylglutamate kinase 0.57 MPMX19_00607 3-isopropylmalate dehydrogenase — —
Desulfovibrio vulgaris Hildenborough JW710 0.50 DVU1466 argB acetylglutamate kinase (TIGR) 0.57 DVU2985 leuB 3-isopropylmalate dehydrogenase (TIGR) 0.89 14
Rhizobium sp. OAE497 0.49 ABIE40_RS01970 acetylglutamate kinase 0.58 ABIE40_RS19050 3-isopropylmalate dehydrogenase 0.93 24
Bosea sp. OAE506 0.49 ABIE41_RS03980 acetylglutamate kinase 0.53 ABIE41_RS11860 3-isopropylmalate dehydrogenase — —
Sinorhizobium meliloti 1021 0.48 SMc01726 acetylglutamate kinase 0.58 SMc04405 3-isopropylmalate dehydrogenase 0.94 17
Phaeobacter inhibens DSM 17395 0.48 PGA1_c02050 acetylglutamate kinase ArgB 0.60 PGA1_c29830 3-isopropylmalate dehydrogenase LeuB 0.75 11
Agrobacterium fabrum C58 0.47 Atu0380 acetylglutamate kinase 0.57 Atu2791 3-isopropylmalate dehydrogenase — —
Sphingomonas koreensis DSMZ 15582 0.47 Ga0059261_2530 N-acetylglutamate kinase (EC 2.7.2.8) 0.56 Ga0059261_3190 3-isopropylmalate dehydrogenase 0.97 31
Rhodopseudomonas palustris CGA009 0.47 TX73_003255 acetylglutamate kinase 0.53 TX73_001175 3-isopropylmalate dehydrogenase — —
Synechococcus elongatus PCC 7942 0.47 Synpcc7942_1496 argB acetylglutamate kinase 0.58 Synpcc7942_1505 leuB 3-isopropylmalate dehydrogenase — —
Dinoroseobacter shibae DFL-12 0.46 Dshi_0324 acetylglutamate kinase (RefSeq) 0.58 Dshi_0081 3-isopropylmalate dehydrogenase (RefSeq) — —
Methanococcus maripaludis JJ 0.45 MMJJ_RS05120 acetylglutamate kinase 0.29 MMJJ_RS02220 3-isopropylmalate dehydrogenase — —
Methanococcus maripaludis S2 0.44 MMP_RS00365 acetylglutamate kinase 0.28 MMP_RS02855 3-isopropylmalate dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.44 A4249_RS12965 acetylglutamate kinase 0.43 A4249_RS09995 3-isopropylmalate dehydrogenase 0.99 11
Magnetospirillum magneticum AMB-1 0.44 AMB_RS22045 acetylglutamate kinase 0.56 AMB_RS20570 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 Δfur 0.44 CCNA_00285 acetylglutamate kinase 0.51 CCNA_00193 3-isopropylmalate dehydrogenase — —
Caulobacter crescentus NA1000 0.44 CCNA_00285 acetylglutamate kinase 0.51 CCNA_00193 3-isopropylmalate dehydrogenase — —
Mycobacterium tuberculosis H37Rv 0.37 Rv1654 Probable acetylglutamate kinase ArgB 0.27 Rv2995c Probable 3-isopropylmalate dehydrogenase LeuB (beta-IPM dehydrogenase) (IMDH) (3-IPM-DH) — —
Bifidobacterium breve UCC2003 0.34 BBR_RS13895 acetylglutamate kinase 0.25 BBR_RS12870 3-isopropylmalate dehydrogenase low > 34
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS04685 acetylglutamate kinase 0.43 ABI39_RS10215 3-isopropylmalate dehydrogenase 0.75 32
Bacteroides ovatus ATCC 8483 0.21 BACOVA_01910 acetylglutamate kinase 0.42 BACOVA_04600 3-isopropylmalate dehydrogenase 0.94 20
Phocaeicola vulgatus CL09T03C04 0.21 HMPREF1058_RS12115 acetylglutamate kinase 0.43 HMPREF1058_RS14565 3-isopropylmalate dehydrogenase 0.70 10
Pedobacter sp. GW460-11-11-14-LB5 0.20 CA265_RS18510 acetylglutamate kinase 0.49 CA265_RS15850 3-isopropylmalate dehydrogenase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.20 Echvi_3850 acetylglutamate kinase 0.46 Echvi_2062 3-isopropylmalate dehydrogenase — —
Parabacteroides merdae CL09T00C40 0.20 HMPREF1078_RS15335 acetylglutamate kinase 0.45 HMPREF1078_RS16640 3-isopropylmalate dehydrogenase 0.95 35
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_13375 acetylglutamate kinase 0.53 CSW01_12600 3-isopropylmalate dehydrogenase low > 62

Not shown: 0 genomes with orthologs for PP_5289 only; 41 genomes with orthologs for PP_1988 only